prot_H-paniculata_contig8002.16031.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8002.16031.1
Unique Nameprot_H-paniculata_contig8002.16031.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length152
Homology
[Close]
BLAST of mRNA_H-paniculata_contig8002.16031.1 vs. uniprot
Match: D7G139_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G139_ECTSI)

HSP 1 Score: 71.2 bits (173), Expect = 1.230e-11
Identity = 52/130 (40.00%), Postives = 58/130 (44.62%), Query Frame = 0 
Query:   52 GRAPISCKFGVQCHRQDCWYSHPEGRLIDAGGGVAGGGAXXXXXXXXXXXXXXGSRGATPLRSMAGAQASPRMGGXXXXGR-----------------------------TECRYGFDCTRRDCHFHHPY 152
            GR P+ C+FGV CHR+DCWY+HP GR IDAGG        XXXXXXX      GS GA+                XXXX                                ECRYGF C R DCHF HP+
Sbjct:    3 GRGPMPCRFGVDCHRKDCWYAHPAGRSIDAGGXXX-----XXXXXXXYGAMPNGSNGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNECRYGFQCKREDCHFSHPF 127
[Close]
BLAST of mRNA_H-paniculata_contig8002.16031.1 vs. uniprot
Match: A0A836CHD1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHD1_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 2.470e-7
Identity = 30/94 (31.91%), Postives = 41/94 (43.62%), Query Frame = 0 
Query:   58 CKFGVQCHRQDCWYSHPEGRLIDAGGGVAGGGAXXXXXXXXXXXXXXGSRGATPLRSMAGAQASPRMGGXXXXGRTECRYGFDCTRRDCHFHHP 151
            C+F   C RQDC+++HP GR+ID   G +GG                G+ G     +  G    P            CR+ +DC R DC+F HP
Sbjct:    7 CRFDTACSRQDCYFAHPNGRMID---GSSGGNGMVMVMPMHAGGGGMGAPGGMANGTGGGGSQKP------------CRFAWDCRRPDCYFAHP 85
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8002.16031.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G139_ECTSI1.230e-1140.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CHD1_9STRA2.470e-731.91Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.58.1670coord: 6..82
e-value: 2.7E-5
score: 26.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8002contigH-paniculata_contig8002:6953..7408 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8002.16031.1mRNA_H-paniculata_contig8002.16031.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8002 6953..7410 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8002.16031.1 ID=prot_H-paniculata_contig8002.16031.1|Name=mRNA_H-paniculata_contig8002.16031.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=152bp
NTFAKRQTRTSGVHPISLSLSPSIGNLKDLIEVRQRPQNPLLLTNMMGSG
GGRAPISCKFGVQCHRQDCWYSHPEGRLIDAGGGVAGGGAGNGHAGGRGG
GGGLGSRGATPLRSMAGAQASPRMGGGGGGGRTECRYGFDCTRRDCHFHH
PY
back to top