prot_H-paniculata_contig8000.16028.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8000.16028.1
Unique Nameprot_H-paniculata_contig8000.16028.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length177
Homology
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BLAST of mRNA_H-paniculata_contig8000.16028.1 vs. uniprot
Match: A0A6H5L5K1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5K1_9PHAE)

HSP 1 Score: 215 bits (548), Expect = 1.110e-61
Identity = 124/201 (61.69%), Postives = 139/201 (69.15%), Query Frame = 0 
Query:    1 MQPPAKHEELLRTIYSTLRRREPNGCDEKELVGRVFHSS--AVVDKTGSAGPAGLGPACDPGGSGVGSTSGPGPGALSDVSDNHPFSKTKVRGAVTLLKFAQAVRVGRGESAGQHVLYVAHELPTFSDFVTRHNRHLVEMA--------------------RELGVDMTSQDWKSLLETDRSRGGV--RALPSPSPTNQSE 177
            MQPPAKH ELLRTIYSTLRRREPNGCDEKELV RVFH+S  A  ++ G  G    G        GV    G G G   D  ++H FSKTKVRGAVTLLKFAQAVRVGRG++AGQHVLYVA+ELPTFSDF+ RHN HLV+MA                    RELGVDMT+ DWKSLLET++S GG   R +PS SPT+QSE
Sbjct:  260 MQPPAKHNELLRTIYSTLRRREPNGCDEKELVSRVFHASMSASAERRGRGGDVNAGTPA-----GVSVAGGGGEGTTGDAPESHRFSKTKVRGAVTLLKFAQAVRVGRGDTAGQHVLYVAYELPTFSDFMARHNSHLVDMAQGLAFTLSTRAHALGRDVSARELGVDMTAMDWKSLLETEQSSGGGGGRPIPSTSPTDQSE 455
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BLAST of mRNA_H-paniculata_contig8000.16028.1 vs. uniprot
Match: D8LE12_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE12_ECTSI)

HSP 1 Score: 212 bits (540), Expect = 1.860e-61
Identity = 114/165 (69.09%), Postives = 127/165 (76.97%), Query Frame = 0 
Query:    1 MQPPAKHEELLRTIYSTLRRREPNGCDEKELVGRVFHSS--AVVDKTGSAGPAGLGPACDPGGSGVGSTSGPGPGALSDVSDNHPFSKTKVRGAVTLLKFAQAVRVGRGESAGQHVLYVAHELPTFSDFVTRHNRHLVEMARELGVDMTSQDWKSLLETDRSRGG 163
            MQPPAKH ELLRTIY TLRRREPNGCDEKELVGRVFHSS  A V++ G  G A  G        GV            D  ++H FSKTKVRGAVTLLKFAQAVRVGRG++AGQHVLYVA+ELPTFSDF+ RHN HLV+MARELGVDMT+ DWKSLLET+++ GG
Sbjct:    1 MQPPAKHNELLRTIYGTLRRREPNGCDEKELVGRVFHSSMSASVERRGGGGDANAGTPA-----GVSVAXXXXXXNTGDAPESHRFSKTKVRGAVTLLKFAQAVRVGRGDTAGQHVLYVAYELPTFSDFMARHNSHLVDMARELGVDMTAMDWKSLLETEQNSGG 160
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8000.16028.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L5K1_9PHAE1.110e-6161.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LE12_ECTSI1.860e-6169.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8000contigH-paniculata_contig8000:462..2228 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8000.16028.1mRNA_H-paniculata_contig8000.16028.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8000 462..2228 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8000.16028.1 ID=prot_H-paniculata_contig8000.16028.1|Name=mRNA_H-paniculata_contig8000.16028.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=177bp
MQPPAKHEELLRTIYSTLRRREPNGCDEKELVGRVFHSSAVVDKTGSAGP
AGLGPACDPGGSGVGSTSGPGPGALSDVSDNHPFSKTKVRGAVTLLKFAQ
AVRVGRGESAGQHVLYVAHELPTFSDFVTRHNRHLVEMARELGVDMTSQD
WKSLLETDRSRGGVRALPSPSPTNQSE
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