prot_H-paniculata_contig8.16017.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8.16017.1
Unique Nameprot_H-paniculata_contig8.16017.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length515
Homology
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BLAST of mRNA_H-paniculata_contig8.16017.1 vs. uniprot
Match: D7FZK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZK8_ECTSI)

HSP 1 Score: 96.3 bits (238), Expect = 2.450e-17
Identity = 45/80 (56.25%), Postives = 63/80 (78.75%), Query Frame = 0 
Query:  408 EDSGRVDTE--VGGDCKELARVRGLCRLRGTILALVEWNVMDSTGVAFSEVSFMLATSLKRDWPQQYIAYLEAKLIFETE 485
            +D GR +     GG  KEL RVRGLCR++G++LALVEW+V+D  G A +E+SF+L+++LK +WP+QYI YLEAK++FE E
Sbjct:  569 QDDGRPEDNGPKGGPQKELLRVRGLCRMQGSVLALVEWSVVDVDGAASTELSFVLSSTLKAEWPRQYIDYLEAKMVFEEE 648
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BLAST of mRNA_H-paniculata_contig8.16017.1 vs. uniprot
Match: A0A6H5KZ06_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ06_9PHAE)

HSP 1 Score: 91.3 bits (225), Expect = 1.000e-15
Identity = 39/69 (56.52%), Postives = 58/69 (84.06%), Query Frame = 0 
Query:  418 GGDCKELARVRGLCRLRGTILALVEWNVMDSTGVAFSEVSFMLATSLKRDWPQQYIAYLEAKLIFETED 486
            G   K+L RVRGLCR++G++LALVEW+++D  G A +E+SF+L+++LK +WP+QYI YLEAK++FE E+
Sbjct:  586 GAPQKKLLRVRGLCRMQGSVLALVEWSMVDVDGAASTELSFVLSSTLKAEWPRQYIDYLEAKMVFEEEE 654
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8.16017.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FZK8_ECTSI2.450e-1756.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KZ06_9PHAE1.000e-1556.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8contigH-paniculata_contig8:12811..15058 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8.16017.1mRNA_H-paniculata_contig8.16017.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8 12113..17388 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8.16017.1 ID=prot_H-paniculata_contig8.16017.1|Name=mRNA_H-paniculata_contig8.16017.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=515bp
MSVGAVRGPPTLPLRPIPACIKPTGIASSADRSRRVTFVGIGLARPAEEN
LSSTVPTLRAKGPIDLQQVTGVAGIRTPTLPPGRGGSNDLGHTFISTGDG
KSSNNNDREPQRRRLGHDMPETSQEGTHRPKRSSVSGRQLQRESVVTAAE
GLGRRVEAERRDIRLGQTQKNDEVVCGDSGMPGRVIDVSVPARGDERWDE
GERIGIGQSQHRCEQMGRGSVDESQEARLLHANNVNAQWLCQDDDLRHQG
GLWMTQEEQDPHEDRDSWKTHADGGNEQGPTPSKYSMTTAPAPPPEPTGR
TAQSPREGHWIQKSENHSGVSNPWATHPRVRNGPFITQSDRSMIPTAPPD
SRAWATHDPTTRRRDRGAAVDVKPCRQDDVPPEGDLRERQDGSARNGGQM
WDCEPVGEDSGRVDTEVGGDCKELARVRGLCRLRGTILALVEWNVMDSTG
VAFSEVSFMLATSLKRDWPQQYIAYLEAKLIFETEDCPYPEASGRGDVAA
AGSGAEMVVWNADD*
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