prot_H-paniculata_contig7994.16011.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig7994.16011.1
Unique Name	prot_H-paniculata_contig7994.16011.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	174

Homology

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BLAST of mRNA_H-paniculata_contig7994.16011.1 vs. uniprot
Match: D7G468_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G468_ECTSI)

HSP 1 Score: 266 bits (680), Expect = 7.880e-89
Identity = 139/172 (80.81%), Postives = 149/172 (86.63%), Query Frame = 0

Query:    2 VKAPKWYAADDVKKKKPSQKHNPTKLRSTIKPGTVLILLSGRFRGKRVVFLKQLPSGTLLVTGPYKVNGVPLRRVNQAYVIATSMTVDVSKVKIPVEDDSYFARVETPKKAAEDQFFEQGSKAATVSDKRKEDQKTVDAGILAAVTAEPLLKAYLNAKFSLKNGDRPHEMKF 173
             KAPKWY+ DDVK K   QKHNPTKLRSTI PGT+LILLSGRFRGKRVVFLKQLPSGTLLVTGPY VNGVP+RRVNQAYVIATSM+VDVSKV IP  DDSYF R E   K  EDQFFEQG+K++TVSDKRK DQKTVDAG+LAA+T  P+LKAYLNAKFSLK GDRPHEM F
Sbjct:    9 AKAPKWYSGDDVKPKAAPQKHNPTKLRSTITPGTILILLSGRFRGKRVVFLKQLPSGTLLVTGPYSVNGVPMRRVNQAYVIATSMSVDVSKVTIPAADDSYFTREEVATKTDEDQFFEQGAKSSTVSDKRKADQKTVDAGVLAAMT-NPMLKAYLNAKFSLKKGDRPHEMIF 179

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BLAST of mRNA_H-paniculata_contig7994.16011.1 vs. uniprot
Match: A0A835YT51_9STRA (60S ribosomal protein L6 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT51_9STRA)

HSP 1 Score: 217 bits (552), Expect = 2.910e-69
Identity = 116/171 (67.84%), Postives = 132/171 (77.19%), Query Frame = 0

Query:    7 WYAADDVKKKKPSQK----HNPTKLRSTIKPGTVLILLSGRFRGKRVVFLKQLPSGTLLVTGPYKVNGVPLRRVNQAYVIATSMTVDVSKVKIPVEDDSYFARVETPKKAAEDQFFEQGSKAATVSDKRKEDQKTVDAGILAAVTAEPLLKAYLNAKFSLKNGDRPHEMKF 173
            WY ADD+K  + S+     H PTKLRS+I PGTV +LLSGRFRGKRVVFLKQ+ SGTLLVTGPYKVNGVPLRRVNQAYVIATS  +DVSKV +   DD+YFAR    KK AED FF Q SK + VSD++K+DQ  VDA ILA ++ + LLKAYLNAKFSL   DRPHEM F
Sbjct:   15 WYPADDIKAPRKSKAKRSVHKPTKLRSSITPGTVCVLLSGRFRGKRVVFLKQMASGTLLVTGPYKVNGVPLRRVNQAYVIATSTKLDVSKVDVSAIDDAYFARAPEAKKTAEDAFFAQASKESVVSDQKKKDQDVVDASILAGLSKDKLLKAYLNAKFSLTKKDRPHEMVF 185

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BLAST of mRNA_H-paniculata_contig7994.16011.1 vs. uniprot
Match: A0A7S1U5W8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U5W8_9STRA)

HSP 1 Score: 205 bits (521), Expect = 8.640e-64
Identity = 113/170 (66.47%), Postives = 131/170 (77.06%), Query Frame = 0

Query:    5 PKWYAADDVKKKKPSQKHN-PTKLRSTIKPGTVLILLSGRFRGKRVVFLKQLPSGTLLVTGPYKVNGVPLRRVNQAYVIATSMTVDVSKVKIPVEDDSYFARVETPKKAAEDQFFEQGSKAATVSDKRKEDQKTVDAGILAAVTAEPLLKAYLNAKFSLKNGDRPHEMKF 173
            P  Y ADDVKK     + N PTKLR++I PGTVLI+L+GRFRGKRVVFLKQL SGTLLVTGPYKVNGVPLRRVNQAYVIATS+ VD++ V +P  DD +FAR +   K  E+QFF     A  VS  RK+ QK VDAGILAAV   PLL+AYL A+FSL+NGD+PH+MKF
Sbjct:   71 PAMYPADDVKKPLMRFRVNKPTKLRASITPGTVLIMLAGRFRGKRVVFLKQLSSGTLLVTGPYKVNGVPLRRVNQAYVIATSVVVDLAGVSLPDIDDEFFAREKKESKTDEEQFFSNEPTATVVSQARKDAQKAVDAGILAAVKKVPLLQAYLGARFSLRNGDKPHKMKF 240

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BLAST of mRNA_H-paniculata_contig7994.16011.1 vs. uniprot
Match: A0A6G0WU17_9STRA (60S ribosomal protein L6 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WU17_9STRA)

HSP 1 Score: 201 bits (511), Expect = 2.660e-62
Identity = 112/173 (64.74%), Postives = 129/173 (74.57%), Query Frame = 0

Query:    6 KWYAADDVKKKKPSQKH-----NPTKLRSTIKPGTVLILLSGRFRGKRVVFLKQLPSGTLLVTGPYKVNGVPLRRVNQAYVIATSMTVDVSKVKIPVEDDSYFARVETPKKAAEDQFFEQGSKAATVSDKRKEDQKTVDAGILAAVTAEPLLKAYLNAKFSLKNGDRPHEMKF 173
            KWY  D V K  PS K        TKLR++I PGTVLILLSGRFRGKRVVFLKQL SGTLLVTGPYKVNGVPLRRVNQA+VIATS  VD+S VK+P  +D+YFA+ +T  K  E+ FF Q S AA VS++RK+DQK VDA ++  + A PLLK YLNAKFSL    R HE+KF
Sbjct:   66 KWYPTDYVPKPLPSAKTARNSVKTTKLRNSITPGTVLILLSGRFRGKRVVFLKQLASGTLLVTGPYKVNGVPLRRVNQAFVIATSTKVDISDVKLPEINDAYFAKEKTHAKKDEEAFFAQSSTAAIVSEQRKKDQKEVDAALIKKINATPLLKQYLNAKFSLSKTQRVHELKF 238

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BLAST of mRNA_H-paniculata_contig7994.16011.1 vs. uniprot
Match: F0WZ30_9STRA (60S ribosomal protein L6 n=2 Tax=Albugo TaxID=65356 RepID=F0WZ30_9STRA)

HSP 1 Score: 197 bits (502), Expect = 4.380e-61
Identity = 113/174 (64.94%), Postives = 131/174 (75.29%), Query Frame = 0

Query:    6 KWYAADDVKKKKPSQK--HNPTK---LRSTIKPGTVLILLSGRFRGKRVVFLKQLPSGTLLVTGPYKVNGVPLRRVNQAYVIATSMTVDVSKVKIPVEDDSYFARVETPKKAA-EDQFFEQGSKAATVSDKRKEDQKTVDAGILAAVTAEPLLKAYLNAKFSLKNGDRPHEMKF 173
            KWY AD + K+  S K   N  K   LR +I PGTVLILLSGRFRGKRVVFLKQLPSGTLLVTGPYK+NGVPLRRVNQAYVIATS  +D+S V     DDSYFA+ +  KK++ EDQFFEQ + A  +SD+R++DQK VD  ++  + AEPLLKAYLNAKFSL   D  HEMKF
Sbjct:   54 KWYPADYIPKRLASAKTVRNSKKTAVLRKSITPGTVLILLSGRFRGKRVVFLKQLPSGTLLVTGPYKINGVPLRRVNQAYVIATSTKIDISGVPSIDIDDSYFAKEKVKKKSSKEDQFFEQSTSAPVISDQRRKDQKAVDEVLINQIEAEPLLKAYLNAKFSLTKKDIVHEMKF 227

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BLAST of mRNA_H-paniculata_contig7994.16011.1 vs. uniprot
Match: A0A5D6Y3Z6_9STRA (60S ribosomal protein L6 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y3Z6_9STRA)

HSP 1 Score: 196 bits (499), Expect = 1.330e-60
Identity = 110/174 (63.22%), Postives = 129/174 (74.14%), Query Frame = 0

Query:    6 KWYAADDVKKKKPSQKH-----NPTKLRSTIKPGTVLILLSGRFRGKRVVFLKQLPSGTLLVTGPYKVNGVPLRRVNQAYVIATSMTVDVSKVKIPVEDDSYFARVE-TPKKAAEDQFFEQGSKAATVSDKRKEDQKTVDAGILAAVTAEPLLKAYLNAKFSLKNGDRPHEMKF 173
            KWY AD + K  PS K         KLR +I PG+VLILLSGRFRGKRVVFLKQL SG LLVTGPYKVNGVPLRRVNQ+YVIATS  VD+  VK+P  +D+YFA+ + + KK+ E+QFF Q + A  + D+RK+DQK VDA +L  V AEPLLKAYLNAKFSL   DR H +KF
Sbjct:   56 KWYPADYIPKPLPSAKTARNSVKTAKLRKSIVPGSVLILLSGRFRGKRVVFLKQLESGCLLVTGPYKVNGVPLRRVNQSYVIATSTKVDLEGVKLPEINDAYFAKEKVSSKKSKEEQFFAQSASAPVIPDQRKKDQKAVDAALLKKVEAEPLLKAYLNAKFSLTKNDRAHALKF 229

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BLAST of mRNA_H-paniculata_contig7994.16011.1 vs. uniprot
Match: A0A485KCY7_9STRA (60S ribosomal protein L6 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KCY7_9STRA)

HSP 1 Score: 195 bits (495), Expect = 6.860e-60
Identity = 107/173 (61.85%), Postives = 128/173 (73.99%), Query Frame = 0

Query:    6 KWYAADDVKKKKPSQKH-----NPTKLRSTIKPGTVLILLSGRFRGKRVVFLKQLPSGTLLVTGPYKVNGVPLRRVNQAYVIATSMTVDVSKVKIPVEDDSYFARVETPKKAAEDQFFEQGSKAATVSDKRKEDQKTVDAGILAAVTAEPLLKAYLNAKFSLKNGDRPHEMKF 173
            KWY  D + +  PS K         KLR++I PGTVLILLSGRFRGKRVVFLKQL SGTLLVTGPYKVNGVPLRRVNQA+VIATS  +D+S VK+P  +D+YFA+ +T  K  E+QFF Q S +A VS++RK+DQK VDA +L  + A   LK YLNAKFSL   D+ HE+KF
Sbjct:   65 KWYPTDYIPRPLPSAKTARNSVKTAKLRASITPGTVLILLSGRFRGKRVVFLKQLASGTLLVTGPYKVNGVPLRRVNQAFVIATSTKIDISDVKLPELNDAYFAKEKTHAKKDEEQFFAQSSTSAIVSEQRKKDQKAVDAALLKKINATAHLKHYLNAKFSLTKNDKVHELKF 237

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BLAST of mRNA_H-paniculata_contig7994.16011.1 vs. uniprot
Match: D0MZV7_PHYIT (60S ribosomal protein L6 n=12 Tax=Phytophthora TaxID=4783 RepID=D0MZV7_PHYIT)

HSP 1 Score: 194 bits (492), Expect = 1.150e-59
Identity = 105/178 (58.99%), Postives = 127/178 (71.35%), Query Frame = 0

Query:    1 KVKAPKWYAADDVKKKKPSQKHN-----PTKLRSTIKPGTVLILLSGRFRGKRVVFLKQLPSGTLLVTGPYKVNGVPLRRVNQAYVIATSMTVDVSKVKIPVEDDSYFARVETPKKAAEDQFFEQGSKAATVSDKRKEDQKTVDAGILAAVTAEPLLKAYLNAKFSLKNGDRPHEMKF 173
            KV   KWY AD + K  PS K         KLR +I PGTVLILLSGRFRGKRVVFL QL SG LLVTGPYKVNGVPLRRVNQ+YVIATS  V++  + +P  DD+YFA+ +  KK+ E+QFF Q S A  + ++RK+DQK VD+ ++  + AEP LK+YLNAKFSL   DR H +KF
Sbjct:   43 KVSTKKWYPADYIPKPLPSAKTKRNSVKTAKLRKSITPGTVLILLSGRFRGKRVVFLNQLASGLLLVTGPYKVNGVPLRRVNQSYVIATSTKVNIEGLALPAIDDAYFAKEKAAKKSKEEQFFAQSSTAPVIPEQRKKDQKAVDSALIKKLEAEPFLKSYLNAKFSLTKNDRAHALKF 220

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BLAST of mRNA_H-paniculata_contig7994.16011.1 vs. uniprot
Match: A0A8K1FLY4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FLY4_PYTOL)

HSP 1 Score: 194 bits (493), Expect = 1.220e-59
Identity = 106/175 (60.57%), Postives = 131/175 (74.86%), Query Frame = 0

Query:    7 WYAADDVKKKKPSQK-----HNPTKLRSTIKPGTVLILLSGRFRGKRVVFLKQLPSGTLLVTGPYKVNGVPLRRVNQAYVIATSMTVDVSKVKIPVEDDSYFARVETP-KKAAEDQFFEQGSKAAT--VSDKRKEDQKTVDAGILAAVTAEPLLKAYLNAKFSLKNGDRPHEMKF 173
            WY AD + KK PS K         KLR +I PGTVLILLSGRFRGKRVVFLKQLPSGTLL+TGPYK+NGVPLRRVNQAYVIATS  VD+S V +P  DDSYF + ++  KK+AE+QF+E   ++ +  VS++RK+DQK VD  +L+ ++ EP L+ YLNAKF+L   DR HE+ F
Sbjct:   59 WYPADYIPKKLPSAKTVRNSKKTAKLRKSITPGTVLILLSGRFRGKRVVFLKQLPSGTLLITGPYKINGVPLRRVNQAYVIATSTKVDLSDVTLPEIDDSYFVKPKSSGKKSAEEQFYESSDESTSRVVSEQRKQDQKAVDDALLSKISNEPYLRTYLNAKFTLTKNDRVHELTF 233

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BLAST of mRNA_H-paniculata_contig7994.16011.1 vs. uniprot
Match: K3W6W0_GLOUD (60S ribosomal protein L6 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W6W0_GLOUD)

HSP 1 Score: 194 bits (492), Expect = 1.620e-59
Identity = 109/179 (60.89%), Postives = 128/179 (71.51%), Query Frame = 0

Query:    1 KVKAPKWYAADDVKKKKPSQKH-----NPTKLRSTIKPGTVLILLSGRFRGKRVVFLKQLPSGTLLVTGPYKVNGVPLRRVNQAYVIATSMTVDVSKVKIPVEDDSYFARVE-TPKKAAEDQFFEQGSKAATVSDKRKEDQKTVDAGILAAVTAEPLLKAYLNAKFSLKNGDRPHEMKF 173
            KV   KWY AD + K  PS K         KLR +I PG+VLILLSGRFRGKRVVFLKQL SG LLVTGPYKVNGVPLRRVNQAYVIATS  VD+  V +P  +D+YFA+ + + KK  E+QFF Q + A  + D+RK+DQK VDA ++  + AEP LKAYLNAKFSL   DR H +KF
Sbjct:   53 KVSTKKWYPADYIPKPLPSAKTARNSVKTAKLRKSIVPGSVLILLSGRFRGKRVVFLKQLESGLLLVTGPYKVNGVPLRRVNQAYVIATSTKVDLEGVSLPEINDAYFAKEKVSSKKTKEEQFFAQSAAAPVIPDQRKKDQKAVDAALIKKIDAEPFLKAYLNAKFSLTKNDRAHALKF 231

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig7994.16011.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig7994.16011.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G468_ECTSI	7.880e-89	80.81	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A835YT51_9STRA	2.910e-69	67.84	60S ribosomal protein L6 n=1 Tax=Tribonema minus T...	[more]
A0A7S1U5W8_9STRA	8.640e-64	66.47	Hypothetical protein n=1 Tax=Phaeomonas parva TaxI...	[more]
A0A6G0WU17_9STRA	2.660e-62	64.74	60S ribosomal protein L6 n=1 Tax=Aphanomyces eutei...	[more]
F0WZ30_9STRA	4.380e-61	64.94	60S ribosomal protein L6 n=2 Tax=Albugo TaxID=6535...	[more]
A0A5D6Y3Z6_9STRA	1.330e-60	63.22	60S ribosomal protein L6 n=1 Tax=Pythium brassicum...	[more]
A0A485KCY7_9STRA	6.860e-60	61.85	60S ribosomal protein L6 n=1 Tax=Aphanomyces stell...	[more]
D0MZV7_PHYIT	1.150e-59	58.99	60S ribosomal protein L6 n=12 Tax=Phytophthora Tax...	[more]
A0A8K1FLY4_PYTOL	1.220e-59	60.57	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
K3W6W0_GLOUD	1.620e-59	60.89	60S ribosomal protein L6 n=1 Tax=Globisporangium u...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000915	60S ribosomal protein L6E	PFAM	PF01159	Ribosomal_L6e	coord: 68..173 e-value: 3.8E-38 score: 130.4
IPR000915	60S ribosomal protein L6E	PANTHER	PTHR10715	60S RIBOSOMAL PROTEIN L6	coord: 3..173
IPR014722	Ribosomal protein L2, domain 2	GENE3D	2.30.30.30		coord: 29..133 e-value: 1.2E-12 score: 49.6
None	No IPR available	PANTHER	PTHR10715:SF0	60S RIBOSOMAL PROTEIN L6	coord: 3..173
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 29..120

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig7994	contig	H-paniculata_contig7994:6639..9199 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig7994.16011.1	mRNA_H-paniculata_contig7994.16011.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig7994 6639..9199 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig7994.16011.1 ID=prot_H-paniculata_contig7994.16011.1|Name=mRNA_H-paniculata_contig7994.16011.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=174bp
KVKAPKWYAADDVKKKKPSQKHNPTKLRSTIKPGTVLILLSGRFRGKRVV
FLKQLPSGTLLVTGPYKVNGVPLRRVNQAYVIATSMTVDVSKVKIPVEDD
SYFARVETPKKAAEDQFFEQGSKAATVSDKRKEDQKTVDAGILAAVTAEP
LLKAYLNAKFSLKNGDRPHEMKF*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000915	60S_ribosomal_L6E
IPR014722	Rib_L2_dom2
IPR008991	Translation_prot_SH3-like_sf