prot_H-paniculata_contig7982.16000.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7982.16000.1
Unique Nameprot_H-paniculata_contig7982.16000.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1339
Homology
BLAST of mRNA_H-paniculata_contig7982.16000.1 vs. uniprot
Match: D7FH12_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH12_ECTSI)

HSP 1 Score: 686 bits (1770), Expect = 1.090e-217
Identity = 560/1460 (38.36%), Postives = 673/1460 (46.10%), Query Frame = 0
Query:    8 VLCTHTFPRFTLSSPQDAGLMMAVLCEAIPPSSDKLMTRVAQFYLSLCGSQQKVTFLTWQLDILLDCLLGPLASMTKDKNSLPAAASWPLSXXXXXXXXXXX---SG-RECVRALAQLLYENGERLGTRFGDILPRLLCLADPFAVDIKTRHTALDAVGNLCLKNWAGFTEAQRADVCSCLTRNFDAHWRALSFTATTAATTVSSASGASCTTLGSPYPLFAAALLPTERKVVASAARGLACAVGKIGVSAVLEPATAASAAARGSRNGXXXXXXXXXXXXXXXXXXXXXXXXXXXLSPTRTGSRPALPDPRARVRLHVLVLLEAIAVKEAKVLYPHWALF--------LGGGGVGTGEGDL---GYTFGHGSPSTGSPVLPAGLVNIMEYDKAPQIRAAAAXXXAALVKNAPLRMWMPLAARGEGAGVGRSIGGIEQRVASMMYQLQMTLVSCLAREESPAVLAKVCACSGALVSEMPYEVGMIAAGENVRTDGRSDF------------------------EELLGGLLAALTTLMLDGSVEPSARIAASQALTAAFSTKEPLTAVDVFLWTFRAD-----PSRGSVTWRSSN-TPSTRIPTTAA--------IHDARLGPPIPSCPGSADDRNNRFAERIGYRRS--------------------------------------------PTFIPTRPVGAGADAGEECVARAGSGPPNM----RVWRRTSPAKINGANASSVRSPATPRTPSSSGAARGLGDCRTDSGECGAGDPDEGFLVDRLIAMANTPGQLRAEALCLLTRIGRSYPSHVCGE-SVTGEITEEVKKVTAGDDEDDHGHDGENGSXXXXXXXXXXXXXXXXXXXXXXXXRTWENVSGLLLRCFADPDQNLRLHALKVLEAFLLARSEQAATAVVGMETNNEKESN--GRVQAAAEDKAPASA------------CGVAVRSAGGGVXXXXGSLWGDLVQKHLQRALEDPYHGVRAVACACHGCLLDSDWEAFADDERDQCLDRLLAATRDRAAGVSVLACRVFAGLMTTAGKPDVAEWCRRPVFLGRCAARLGEMMNDSKATIRAQATLAVGNLSCSLHAMRSRSTRASILTAPTAALPDPSNSNLSHDNISQISTSRSLGP---EPVERPQLRSLCEGALRLAKSEPDHSAASAARALGYLAWNLDTSS-----DGGSNSDRRTEFFEDTNRTGIATTPALPSGGQPAETVSRYRPHAMAITTMVPKAKTLEGNE----DAVGDREDWNLQDAAVLTLAARTNAVEEAAAGLANAGVGERGGEIVVGQGRAARSGESVKDRKADTTAAKCRRGVTSVELLHRSRNYPLRAWVASAVAACALGRDASAVPPQVTIMAMEDDRHLKVRTHAAVALRAVPSTLAYGDDLPAIFGGALRLLLACGKGIVVSDPTQIRYADPLEPALRALVLHMFLLLV 1339
            +L   T+P  ++S PQDAG M++ LCEA+P SS  L  RVAQ +  LC  QQ+V+FL WQL+I+LD  +  L S   +    P        XXXXXXXX      SG R+C RALAQLLYENGERLGTRF D++P LL LADP A+D+ TRH ALDA+ NLCLKNWAGF E QR  +CSCLTRNF AHW                                                                                                                           ARVRL  L LLE++A K+AK +YPHWALF        + GGG   G+      G     G  ST   VLPAGLV+IME D APQ+              +PLR WM LA             GI +RV SMM +L  +LV CLA+E+SPAV+AK+C+C+GAL++EMPY     A+G                                   EE LG LL  L  LM+D + EPSARIAASQALTA FSTKEP+ A+D FL +FR       PS    +W  S  TP    P +AA        +  +    P+P  PGSADDR NRF   +                                                   ++     G    +  E V  +   PP +     V   T+PA                   S+S  A G GD     G  G G       VDRLIA+A  PGQLRAEAL LLTRIGRSYP+H+ G  +  G + E   K TA                                        TWE VS LLLRCFADPDQNLRLHALKVLEA LLAR+EQAA A   +    EK S   G    AAE  +P                           XXX G +W DLVQKHLQRALEDPYHGVRAVAC+CH  LL SDWEAF+D ER++CL R+LAATRDRAAGV++LACRV AG+MT AG+   A WCR P FL RCAARL EMM D+K                                      P             Q+S +   G    + + RP+LRSLC+GALRL  +EPDH+A SA RALGYLAW LD  +     DG    D   +  E  N + +   P LP GG   + V+  R    A    V +     G E        D  D +LQD A+L L+ R  A ++    L N G G                     DR+A+   AKCR     VELLHR  + P+R   AS      +G  A AV  +    A+ DD HLKVRTHAA AL+AV    AYGD LP+I GG LR L AC    VV+DPTQ+RYA  LE ALR+LVLH+ + LV
Sbjct:  144 ILARLTYPNSSIS-PQDAGFMLSALCEAVPRSSRGLSARVAQLFELLCAKQQRVSFLAWQLNIVLDLFVASLPSAAAEVQVAPXXXXXXXXXXXXXXXXRPPRPLSGQRDCTRALAQLLYENGERLGTRFDDVVPPLLRLADPSAIDLDTRHAALDALANLCLKNWAGFAEQQRQAICSCLTRNFVAHW---------------------------------------------------------------------------------------------------------------------------ARVRLQALALLESMAAKDAKSMYPHWALFFAPYVPGAVSGGGACGGDAAAATPGEVSEGGGGSTRPVVLPAGLVSIMESDHAPQV--------------SPLRKWMMLAXXXX--XXXXXXXGIGERVESMMLRLHRSLVLCLAQEKSPAVVAKLCSCTGALIAEMPYATSQAASGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEESLGDLLRELARLMVDVAAEPSARIAASQALTAVFSTKEPIAAIDSFLLSFRCSAAGGLPSSCRGSWGGSRATPPPSSPASAARRGNGANAVAGSGAWSPLPLRPGSADDRGNRFVGGVARNGGVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYVXXXXXGGLRASDREGVRASDQMPPPLPREATVDDDTAPAXXXXXXXXXXG------LASASEGANGRGD-----GVDGGGSDS---FVDRLIALAGAPGQLRAEALGLLTRIGRSYPAHLSGGCTARGTVAE---KTTA---------------------------------------TTWERVSALLLRCFADPDQNLRLHALKVLEALLLARAEQAAAAAEALPVAGEKSSGTAGXXXXAAESVSPKQKPRSETXXXXXXXXXXXXXXXXXXXXXXGGKVWRDLVQKHLQRALEDPYHGVRAVACSCHASLLKSDWEAFSDRERERCLGRVLAATRDRAAGVNILACRVVAGVMTMAGQEGAAAWCRDPEFLHRCAARLQEMMEDTK--------------------------------------PXXXXXXXEGTRDCQVSPAAGTGAGTGDLIPRPRLRSLCDGALRLTATEPDHAAGSAVRALGYLAWGLDPDNFGGGGDGWGGKDGVVKARERDNESAV---PLLPVGGDEDDAVASGRTVEAAAAAAVGRPVQERGGEGFGESGEEDGGDRDLQDKAILALSTRL-APDKGDRELGNYGAGXXXXXXXX-------------DRRAEIAGAKCRSEPLLVELLHRPWDCPVREGGASEGREGPVGARAHAVLREAR--AVLDDNHLKVRTHAAHALKAVLDARAYGDQLPSILGGCLRGLAACKSRSVVADPTQMRYAGDLEVALRSLVLHILIALV 1350          
BLAST of mRNA_H-paniculata_contig7982.16000.1 vs. uniprot
Match: A0A6H5K415_9PHAE (DUF4042 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K415_9PHAE)

HSP 1 Score: 665 bits (1715), Expect = 1.770e-208
Identity = 606/1561 (38.82%), Postives = 733/1561 (46.96%), Query Frame = 0
Query:   35 AIPPSSDKLMTRVAQFYLSLCGSQQKVTFLTWQLDILLDCLLGPLASMTKDKNSLPAAASWPLSXXXXXXXXXXXS---GRECVRALAQLLYENGERLGTRFGDILPRLLCLADPFAVDIKTRHTALDAVGNLCLKNWAGFTEAQRADVCSCLTRNFDAHWRALSFTATTAATTVSSASGASCTTLGSPYPLFAAALLPTERKVVASAARGLACAVGKIGVSAVLEP-----------------------ATAASAAARGSRNGXXXXXXXXXXXXXXXXXXXXXXXXXXXLS----PTRTGSRPALPDPRARVRLHVLVLLEAIAVKEAKVLYPHWALF--------LGGGGVGTGEGDLGYTFGHGSP---STGSPVLPAGLVNIMEYDKAPQIRAAAAXXXAALVKNAPLRMWMPLAARGEGAGVGRSIGGIEQRVASMMYQLQMTLVSCLAREESPAVLAKVCACSGALVSEMPYEVGMIAAGENVRTDGR------------------------SDFEELLGGLLAALTTLMLDGSVEPSARIA---------------------------------------------ASQALTAAFSTKEPLTAVDVFLWTFRAD-----PSRGSVTWRSSN-TPSTRIPTTAAIH----DARLGP----PIPSCPGSADDRNNRFAERIGYRRSPTFIPTRPVGA------------------------------------GADAGEECVARAGSGPPNMRVWRRTSPAKINGANASSVRSPATPRT---------------PSSSGAA---RGLGDCRTDSGECGAGDPDEGFLVDRLIAMANTPGQLRAEALCLLTRIGRSYPSHVCGE-SVTGEITEEVKKVTAGDDEDDHGHDGENGSXXXXXXXXXXXXXXXXXXXXXXXXRTWENVSGLLLRCFADPDQNLRLHALKVLEAFLLARSEQA------------ATAVVGMETNNEKESNGRVQAAAEDK------APASACGVAVRSAGG----------------------------GVXXXXGS-------------LWGDLVQKHLQRALEDPYHGVRAVACACHGCLLDSDWEAFADDERDQCLDRLLAATRDRAAGVSVLACRVFAGLMTTAGKPDVAEWCRRPVFLGRCAARLGEMMNDSKATIRAQATLAVGNLSCSLHAMRSRSTRASI-------LTAPTAALPDPSNSNLSHDNISQISTSRSLGP---EPVERPQLRSLCEGALRLAKSEPDHSAASAARALGYLAWNLDTSSDGGSNSDR--RTEFFEDTNRTGIATTPALPSGGQPAETVS---RYRPHAMAITTMVPKAKTLEGNEDAVGDREDWNLQDAAVLTLAARTNAVEEAAAGLANAGVGERGGEIVVGQGRAARSGESVKDRKADTTAAKCRRGVT-SVELLHRSRNYPLRAWVA--SAVAACALGRDASAVPPQVTIMAMEDDRHLKVRTHAAVALRAVPSTLAYGDDLPAIFGGALRLLLACGKGIVVSDPTQIRYADPLEPALRALVLHMFLLLV 1339
            ++ P+++    R     L LC +QQ+VTFL WQL+I+LD  +  L +   +    P     P                  R+C RALAQLLYENGERLGTRF D++P LL LADP A+D+ TRH ALDA+ NLCLKNWAGF E QR   CSCLTRNF A+WRA + +        S                      P ERK++ASA RGLACA+GK GVS VLEP                       A   +AA RG+   XXXXXXXXXXXXXXXXXX XXXXXXXX      PTR+ +  +L DPRARVRL  L LLE++A K+AK +YPHWALF        + GGG                    ST   VLPAGLV+IME D APQ+RAAA XXX                             GI +RV SMM +L  +LV CLA+E+SPAV+AK+C+C+GAL++EMPY     A+G                                S  EE LG LL  L  LM+D + EPSARIA                                             +SQALTA FSTKEP+ A+D FL +FR       PS    +W  S  TP +  P +AA      +A  GP    P+P  PGSADDR NRF   +                                                    GAD G    AR G     +R   R       GA AS    P  PR                P+ +G A    G  D R D G+ G GD      VDRLIA+A  PGQLRAEAL LLTRIGRSYP+H+ G  S  G + E     T                                          WE VS LLLRCFADPDQNLRLHALKVLEA LLAR+EQ             A +V G   +           +   K        A+A G++     G                            GV    G+             +W DLVQKHLQRALEDPYHGVRAVAC+CH  LL SDWEAF+D ERD+CL R+LAATRDRAAGV++LACRV AG+MT AG+   A WCR P FL RCAARL EMM D+KA       LAVGNLSCSLH +RSR  R S+                             Q+S +   G    + + RP+LRSLC+GALRLA +EP+H+A SA RALGYLAW LD  + GG    R  +    E   R   +    LP  G   + ++        AMA    V +       E    D  D +LQD A+LTL+ R    ++    L N G    GG    G G          DR+A+   AKCR     ++ ++  +R    RA  A  + V   +LGR            A+ DD HLKVRTHAA AL+AV    AYGD LP+I GG LR L AC    +V+D TQ+RYA  LE ALR+LVLH+ + LV
Sbjct:    2 SLAPATNPRRRRPRARSLQLCANQQRVTFLAWQLNIVLDLFVACLPTADAEVQVAPPRPPAPAEENLPPPLRPPRPLSFQRDCTRALAQLLYENGERLGTRFDDVVPPLLRLADPSAIDLDTRHAALDALANLCLKNWAGFAEPQRQMTCSCLTRNFVANWRAFASS--------SXXXXXXXXXXXXXXXXXXXXXXPGERKILASATRGLACAIGKAGVSPVLEPYLARVVHALNHLVQPAGEGERSGAATTAAATRGASGXXXXXXXXXXXXXXXXXXXFXXXXXXXXXXXXXXPTRSSASASLVDPRARVRLQALALLESMAAKDAKSMYPHWALFFAPCVPGAVSGGGXXXXXXXXXXXXXXXXXXXXSTRPVVLPAGLVSIMESDLAPQVRAAAXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXGIGERVESMMLRLHRSLVLCLAQEKSPAVVAKLCSCTGALIAEMPYATSQAASGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGVEESLGDLLRELARLMVDVAAEPSARIAGASFFHDXXXXXXXXXNLLYFCLALLCSVLVQSWPLDRASYRSVSSSQALTAVFSTKEPVAAIDSFLLSFRCSAAGGLPSSCGGSWGGSRATPPSSSPASAARRGNGANAVAGPGAWSPLPLRPGSADDRGNRFVGGVARNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRGADVGGR--ARGG-----LRASDR------RGARASDQMPPPLPRESTVDDDTAPAAAXXXPAPAGLAAPSEGAND-RGDDGDGGGGDS----FVDRLIALAGAPGQLRAEALGLLTRIGRSYPAHLSGGCSARGAVAETTTATT------------------------------------------WERVSALLLRCFADPDQNLRLHALKVLEALLLARAEQXXXXXXXXXXXAEALSVAGENFSGTAGGXXXXXXSVSPKQNPLSETAAAAGGLSAEGVEGAGLSQGTPISNVAEXXXXXXXXXXXERRGVVGSSGTAAXXXXXXXXXXKVWRDLVQKHLQRALEDPYHGVRAVACSCHASLLKSDWEAFSDPERDRCLGRVLAATRDRAAGVNILACRVVAGVMTMAGEEGAAAWCRDPEFLDRCAARLQEMMEDTKAM------LAVGNLSCSLHGIRSR--RRSLPXXXXXXXXXXXXXXXXXXXXXXEGTRDCQVSPAAGTGAGTGDLLPRPRLRSLCDGALRLAATEPNHAAGSAVRALGYLAWGLDPENFGGGADGRGGKNGVVEARARDNESAASLLPVEGDEVDVIAIGPTVEAAAMAGRRPVQERGGDGFGESGEEDGGDRDLQDKAILTLSTRLAPDKKGDLELRNCGAWGEGGS---GGG----------DRRAEIAGAKCRWNCCIALGVVLSARGVQARAARAQWAPVLMQSLGR------------AVLDDNHLKVRTHAAHALKAVLDARAYGDQLPSILGGCLRGLDACKNRSIVADSTQMRYAGDLEVALRSLVLHILIALV 1460          
BLAST of mRNA_H-paniculata_contig7982.16000.1 vs. uniprot
Match: W7TRQ9_9STRA (Armadillo-like helical n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TRQ9_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 8.740e-5
Identity = 42/120 (35.00%), Postives = 52/120 (43.33%), Query Frame = 0
Query:  788 LLLRCFADPDQNLRLHALKVLEAFLLARSEQAATAVVGMETNNEKESNGRVQAAAEDKAPASACGVAVRSAGGGVXXXXGSL--WGDLVQKHLQRALEDPYHGVRAVACACHGCLLDSDW 905
            +LL  F   DQN+RLHALKV+E  L  R  +    + G      +E  G                      G G     GSL  W   + +H++ A  DPYHGVRAVACAC       DW
Sbjct:   52 VLLGNFGGGDQNIRLHALKVVEELLQWRKHKKTEDIAGQ---GRREGTG----------------------GKGKRREEGSLEGWVFFLMRHVRHAFYDPYHGVRAVACACLSHFEAKDW 146          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7982.16000.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FH12_ECTSI1.090e-21738.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K415_9PHAE1.770e-20838.82DUF4042 domain-containing protein n=1 Tax=Ectocarp... [more]
W7TRQ9_9STRA8.740e-535.00Armadillo-like helical n=1 Tax=Nannochloropsis gad... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025283Domain of unknown function DUF4042PFAMPF13251DUF4042coord: 375..473
e-value: 9.1E-5
score: 22.2
NoneNo IPR availablePANTHERPTHR13366MALARIA ANTIGEN-RELATEDcoord: 1259..1335
coord: 18..1084
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 114..1280

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7982contigH-paniculata_contig7982:2592..10579 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7982.16000.1mRNA_H-paniculata_contig7982.16000.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7982 2592..10579 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7982.16000.1 ID=prot_H-paniculata_contig7982.16000.1|Name=mRNA_H-paniculata_contig7982.16000.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1339bp
MTRPDAAVLCTHTFPRFTLSSPQDAGLMMAVLCEAIPPSSDKLMTRVAQF
YLSLCGSQQKVTFLTWQLDILLDCLLGPLASMTKDKNSLPAAASWPLSES
QPPSEALPPSGRECVRALAQLLYENGERLGTRFGDILPRLLCLADPFAVD
IKTRHTALDAVGNLCLKNWAGFTEAQRADVCSCLTRNFDAHWRALSFTAT
TAATTVSSASGASCTTLGSPYPLFAAALLPTERKVVASAARGLACAVGKI
GVSAVLEPATAASAAARGSRNGSSGSHSGSRSRSRGMGSVGPGSNGGGGL
SPTRTGSRPALPDPRARVRLHVLVLLEAIAVKEAKVLYPHWALFLGGGGV
GTGEGDLGYTFGHGSPSTGSPVLPAGLVNIMEYDKAPQIRAAAAAAAAAL
VKNAPLRMWMPLAARGEGAGVGRSIGGIEQRVASMMYQLQMTLVSCLARE
ESPAVLAKVCACSGALVSEMPYEVGMIAAGENVRTDGRSDFEELLGGLLA
ALTTLMLDGSVEPSARIAASQALTAAFSTKEPLTAVDVFLWTFRADPSRG
SVTWRSSNTPSTRIPTTAAIHDARLGPPIPSCPGSADDRNNRFAERIGYR
RSPTFIPTRPVGAGADAGEECVARAGSGPPNMRVWRRTSPAKINGANASS
VRSPATPRTPSSSGAARGLGDCRTDSGECGAGDPDEGFLVDRLIAMANTP
GQLRAEALCLLTRIGRSYPSHVCGESVTGEITEEVKKVTAGDDEDDHGHD
GENGSSCRRQEEPISTPSQQRQQLSRRRRRTWENVSGLLLRCFADPDQNL
RLHALKVLEAFLLARSEQAATAVVGMETNNEKESNGRVQAAAEDKAPASA
CGVAVRSAGGGVGGGGGSLWGDLVQKHLQRALEDPYHGVRAVACACHGCL
LDSDWEAFADDERDQCLDRLLAATRDRAAGVSVLACRVFAGLMTTAGKPD
VAEWCRRPVFLGRCAARLGEMMNDSKATIRAQATLAVGNLSCSLHAMRSR
STRASILTAPTAALPDPSNSNLSHDNISQISTSRSLGPEPVERPQLRSLC
EGALRLAKSEPDHSAASAARALGYLAWNLDTSSDGGSNSDRRTEFFEDTN
RTGIATTPALPSGGQPAETVSRYRPHAMAITTMVPKAKTLEGNEDAVGDR
EDWNLQDAAVLTLAARTNAVEEAAAGLANAGVGERGGEIVVGQGRAARSG
ESVKDRKADTTAAKCRRGVTSVELLHRSRNYPLRAWVASAVAACALGRDA
SAVPPQVTIMAMEDDRHLKVRTHAAVALRAVPSTLAYGDDLPAIFGGALR
LLLACGKGIVVSDPTQIRYADPLEPALRALVLHMFLLLV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025283DUF4042
IPR016024ARM-type_fold