prot_H-paniculata_contig79740.15996.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig79740.15996.1
Unique Nameprot_H-paniculata_contig79740.15996.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length75
Homology
BLAST of mRNA_H-paniculata_contig79740.15996.1 vs. uniprot
Match: A0A2R4QQ52_9PHAE (30S ribosomal protein S8 n=4 Tax=Phaeophyceae TaxID=2870 RepID=A0A2R4QQ52_9PHAE)

HSP 1 Score: 149 bits (375), Expect = 7.730e-45
Identity = 69/74 (93.24%), Postives = 74/74 (100.00%), Query Frame = 0
Query:    1 LLLCLKYHTQKRQPIITGIKRISKPGLRIYVNKNNLPNVLNNLGIAILSTSKGILTNNKAKKLGVGGEIICYIW 74
            LLLCLKYH+QKRQPIITGIKRISKPGLRIYVNKNNLPN+LNNLG+AILSTSKGILTNNKAKKLG+GGE+ICYIW
Sbjct:   55 LLLCLKYHSQKRQPIITGIKRISKPGLRIYVNKNNLPNILNNLGVAILSTSKGILTNNKAKKLGIGGEVICYIW 128          
BLAST of mRNA_H-paniculata_contig79740.15996.1 vs. uniprot
Match: A0A1I9LVH6_9PHAE (30S ribosomal protein S8, chloroplastic n=33 Tax=Phaeophyceae TaxID=2870 RepID=A0A1I9LVH6_9PHAE)

HSP 1 Score: 147 bits (372), Expect = 2.510e-44
Identity = 72/74 (97.30%), Postives = 73/74 (98.65%), Query Frame = 0
Query:    1 LLLCLKYHTQKRQPIITGIKRISKPGLRIYVNKNNLPNVLNNLGIAILSTSKGILTNNKAKKLGVGGEIICYIW 74
            LLLCLKYH QKRQPIITGIKRISKPGLRIYVNK+NLPNVLNNLGIAILSTSKGILTNNKAKKLGVGGEIICYIW
Sbjct:   59 LLLCLKYHIQKRQPIITGIKRISKPGLRIYVNKSNLPNVLNNLGIAILSTSKGILTNNKAKKLGVGGEIICYIW 132          
BLAST of mRNA_H-paniculata_contig79740.15996.1 vs. uniprot
Match: A0A6B9TPR3_SARFS (30S ribosomal protein S8, chloroplastic n=14 Tax=Sargassaceae TaxID=3014 RepID=A0A6B9TPR3_SARFS)

HSP 1 Score: 141 bits (356), Expect = 6.860e-42
Identity = 64/74 (86.49%), Postives = 73/74 (98.65%), Query Frame = 0
Query:    1 LLLCLKYHTQKRQPIITGIKRISKPGLRIYVNKNNLPNVLNNLGIAILSTSKGILTNNKAKKLGVGGEIICYIW 74
            LLLCLKYH QKR+PIITGIKRISKPGLR+YVNK+NLPN+LNNLGIAILSTSKGI+TN+KA+KLG+GGE+ICYIW
Sbjct:   59 LLLCLKYHNQKREPIITGIKRISKPGLRVYVNKSNLPNILNNLGIAILSTSKGIITNHKARKLGIGGEVICYIW 132          
BLAST of mRNA_H-paniculata_contig79740.15996.1 vs. uniprot
Match: A0A2I4Q355_9PHAE (30S ribosomal protein S8, chloroplastic n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q355_9PHAE)

HSP 1 Score: 137 bits (345), Expect = 3.250e-40
Identity = 65/74 (87.84%), Postives = 71/74 (95.95%), Query Frame = 0
Query:    1 LLLCLKYHTQKRQPIITGIKRISKPGLRIYVNKNNLPNVLNNLGIAILSTSKGILTNNKAKKLGVGGEIICYIW 74
            LLL LKY+ QKRQPIITG+KR+SKPGLRIYVNKNNLP V+NNLGIAILSTSKGILTNNKAKKLGVGGE++CYIW
Sbjct:   59 LLLSLKYYNQKRQPIITGLKRVSKPGLRIYVNKNNLPIVINNLGIAILSTSKGILTNNKAKKLGVGGEVLCYIW 132          
BLAST of mRNA_H-paniculata_contig79740.15996.1 vs. uniprot
Match: A0A8F0F790_9PHAE (Ribosomal protein S8 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F790_9PHAE)

HSP 1 Score: 134 bits (337), Expect = 5.360e-39
Identity = 63/74 (85.14%), Postives = 70/74 (94.59%), Query Frame = 0
Query:    1 LLLCLKYHTQKRQPIITGIKRISKPGLRIYVNKNNLPNVLNNLGIAILSTSKGILTNNKAKKLGVGGEIICYIW 74
            LLLCLKYH++KRQPIIT +KRISKPGLRIYV+  NLP V+NNLGIAI+STSKGILTNNKAKKLGVGGE+ICYIW
Sbjct:   59 LLLCLKYHSKKRQPIITELKRISKPGLRIYVSNKNLPTVVNNLGIAIMSTSKGILTNNKAKKLGVGGEVICYIW 132          
BLAST of mRNA_H-paniculata_contig79740.15996.1 vs. uniprot
Match: A0A7S6ZPB1_9STRA (30S ribosomal protein S8, chloroplastic n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6ZPB1_9STRA)

HSP 1 Score: 130 bits (327), Expect = 1.790e-37
Identity = 60/74 (81.08%), Postives = 70/74 (94.59%), Query Frame = 0
Query:    1 LLLCLKYHTQKRQPIITGIKRISKPGLRIYVNKNNLPNVLNNLGIAILSTSKGILTNNKAKKLGVGGEIICYIW 74
            LLLCLKYH Q RQPII+ IKRISKPGLRIYV+K NLPNVL+NLGIAI+STSKG++TN+KA++LGVGGE+ICYIW
Sbjct:   59 LLLCLKYHGQNRQPIISAIKRISKPGLRIYVDKKNLPNVLSNLGIAIISTSKGVMTNHKARELGVGGEVICYIW 132          
BLAST of mRNA_H-paniculata_contig79740.15996.1 vs. uniprot
Match: A0A8E6D514_9PHAE (30S ribosomal protein S8, chloroplastic n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E6D514_9PHAE)

HSP 1 Score: 120 bits (300), Expect = 1.980e-33
Identity = 58/74 (78.38%), Postives = 64/74 (86.49%), Query Frame = 0
Query:    1 LLLCLKYHTQKRQPIITGIKRISKPGLRIYVNKNNLPNVLNNLGIAILSTSKGILTNNKAKKLGVGGEIICYIW 74
            LLLCLKY+   R P I GIKRISKPGLRIYV+ +NLP VL+NLGIAILSTSKGILTN  AKKLG+GGE+ICYIW
Sbjct:   54 LLLCLKYYGYNRSPTIKGIKRISKPGLRIYVSGDNLPKVLSNLGIAILSTSKGILTNYSAKKLGIGGEVICYIW 127          
BLAST of mRNA_H-paniculata_contig79740.15996.1 vs. uniprot
Match: B7T1X1_VAULI (30S ribosomal protein S8, chloroplastic n=1 Tax=Vaucheria litorea TaxID=109269 RepID=B7T1X1_VAULI)

HSP 1 Score: 117 bits (293), Expect = 2.660e-32
Identity = 53/74 (71.62%), Postives = 64/74 (86.49%), Query Frame = 0
Query:    1 LLLCLKYHTQKRQPIITGIKRISKPGLRIYVNKNNLPNVLNNLGIAILSTSKGILTNNKAKKLGVGGEIICYIW 74
            LLLCLKY+  KR+PI+T + RISKPGLRIYVN  N+P VL NLGIAI+STSKG++TN+ AK LG+GGE+ICYIW
Sbjct:   59 LLLCLKYNGSKRKPILTTVVRISKPGLRIYVNHKNIPQVLGNLGIAIISTSKGVITNHTAKNLGIGGEVICYIW 132          
BLAST of mRNA_H-paniculata_contig79740.15996.1 vs. uniprot
Match: A0A8K1YHB5_9STRA (Ribosomal protein S8 n=1 Tax=Thalassiosira sp. TaxID=1891026 RepID=A0A8K1YHB5_9STRA)

HSP 1 Score: 114 bits (286), Expect = 3.090e-31
Identity = 54/74 (72.97%), Postives = 62/74 (83.78%), Query Frame = 0
Query:    1 LLLCLKYHTQKRQPIITGIKRISKPGLRIYVNKNNLPNVLNNLGIAILSTSKGILTNNKAKKLGVGGEIICYIW 74
            LLL LKY  Q R+ +I  IKR+SKPGLRIYVN   LPNVLN LGIAILSTSKGI+TN KAK+LG+GGE++CYIW
Sbjct:   59 LLLSLKYKGQSRERVINKIKRVSKPGLRIYVNSQKLPNVLNGLGIAILSTSKGIMTNTKAKELGIGGEVLCYIW 132          
BLAST of mRNA_H-paniculata_contig79740.15996.1 vs. uniprot
Match: A0A1D8DB85_9STRA (30S ribosomal protein S8, chloroplastic n=1 Tax=Toxarium undulatum TaxID=210620 RepID=A0A1D8DB85_9STRA)

HSP 1 Score: 113 bits (282), Expect = 1.150e-30
Identity = 51/74 (68.92%), Postives = 64/74 (86.49%), Query Frame = 0
Query:    1 LLLCLKYHTQKRQPIITGIKRISKPGLRIYVNKNNLPNVLNNLGIAILSTSKGILTNNKAKKLGVGGEIICYIW 74
            +L+CLKY  + R+P+I+ IKRIS+PGLRIY N  NLP VLNNLGIAI+STS G++TN KAK+LG+GGEI+CYIW
Sbjct:   56 ILVCLKYSGKVRKPVISNIKRISRPGLRIYTNSKNLPKVLNNLGIAIVSTSHGVMTNLKAKELGLGGEILCYIW 129          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig79740.15996.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2R4QQ52_9PHAE7.730e-4593.2430S ribosomal protein S8 n=4 Tax=Phaeophyceae TaxI... [more]
A0A1I9LVH6_9PHAE2.510e-4497.3030S ribosomal protein S8, chloroplastic n=33 Tax=P... [more]
A0A6B9TPR3_SARFS6.860e-4286.4930S ribosomal protein S8, chloroplastic n=14 Tax=S... [more]
A0A2I4Q355_9PHAE3.250e-4087.8430S ribosomal protein S8, chloroplastic n=1 Tax=Di... [more]
A0A8F0F790_9PHAE5.360e-3985.14Ribosomal protein S8 n=1 Tax=Protohalopteris sp. T... [more]
A0A7S6ZPB1_9STRA1.790e-3781.0830S ribosomal protein S8, chloroplastic n=1 Tax=Sc... [more]
A0A8E6D514_9PHAE1.980e-3378.3830S ribosomal protein S8, chloroplastic n=1 Tax=Is... [more]
B7T1X1_VAULI2.660e-3271.6230S ribosomal protein S8, chloroplastic n=1 Tax=Va... [more]
A0A8K1YHB5_9STRA3.090e-3172.97Ribosomal protein S8 n=1 Tax=Thalassiosira sp. Tax... [more]
A0A1D8DB85_9STRA1.150e-3068.9230S ribosomal protein S8, chloroplastic n=1 Tax=To... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000630Ribosomal protein S8PFAMPF00410Ribosomal_S8coord: 3..74
e-value: 1.3E-27
score: 96.3
IPR000630Ribosomal protein S8PANTHERPTHR1175840S RIBOSOMAL PROTEIN S15Acoord: 1..74
IPR000630Ribosomal protein S8PROSITEPS00053RIBOSOMAL_S8coord: 44..61
NoneNo IPR availableGENE3D3.30.1490.10coord: 17..74
e-value: 1.2E-28
score: 100.5
NoneNo IPR availablePANTHERPTHR11758:SF29coord: 1..74
IPR035987Ribosomal protein S8 superfamilySUPERFAMILY56047Ribosomal protein S8coord: 2..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig79740contigH-paniculata_contig79740:318..542 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig79740.15996.1mRNA_H-paniculata_contig79740.15996.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig79740 318..542 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig79740.15996.1 ID=prot_H-paniculata_contig79740.15996.1|Name=mRNA_H-paniculata_contig79740.15996.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=75bp
LLLCLKYHTQKRQPIITGIKRISKPGLRIYVNKNNLPNVLNNLGIAILST
SKGILTNNKAKKLGVGGEIICYIW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000630Ribosomal_S8
IPR035987Ribosomal_S8_sf