prot_H-paniculata_contig79354.15964.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig79354.15964.1
Unique Nameprot_H-paniculata_contig79354.15964.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length53
Homology
BLAST of mRNA_H-paniculata_contig79354.15964.1 vs. uniprot
Match: A0A1E1IXG3_LEIGU (Ubiquitin carboxyl-terminal hydrolase n=4 Tax=Viannia TaxID=37616 RepID=A0A1E1IXG3_LEIGU)

HSP 1 Score: 58.2 bits (139), Expect = 1.630e-8
Identity = 25/53 (47.17%), Postives = 37/53 (69.81%), Query Frame = 0
Query:    1 ICKDTIIKTKLEWEQEHRSGLGPGMKNLRNTCFINSFLQGLAHIPSVAQYFMD 53
            +C D  +++ L    ++ + +G G+ NL NTCF NS LQ LAHIP++AQYFM+
Sbjct:   97 LCSDAQLRSSLYLRWQNITPVGLGLMNLGNTCFANSVLQALAHIPALAQYFMN 149          
BLAST of mRNA_H-paniculata_contig79354.15964.1 vs. uniprot
Match: A0A6H5JJN5_9PHAE (USP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJN5_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 4.170e-8
Identity = 24/50 (48.00%), Postives = 39/50 (78.00%), Query Frame = 0
Query:    4 DTIIKTKLEWEQEHRSGLGPGMKNLRNTCFINSFLQGLAHIPSVAQYFMD 53
            D+ IK  L+W+Q HR  +GPG++NL NTCF+N+ LQ L+++P +AQ+ ++
Sbjct:  250 DSKIKACLQWKQVHR--MGPGLRNLGNTCFLNATLQCLSYLPPLAQHLLN 297          
BLAST of mRNA_H-paniculata_contig79354.15964.1 vs. uniprot
Match: A0A7M7GC60_NASVI (Ubiquitin carboxyl-terminal hydrolase n=4 Tax=Pteromalinae TaxID=272242 RepID=A0A7M7GC60_NASVI)

HSP 1 Score: 48.5 bits (114), Expect = 4.110e-5
Identity = 18/46 (39.13%), Postives = 29/46 (63.04%), Query Frame = 0
Query:    8 KTKLEWEQEHRSGLGPGMKNLRNTCFINSFLQGLAHIPSVAQYFMD 53
            K  L W++ H   +G GM N+ NTC++NS LQ L H+P++  + + 
Sbjct:  110 KVNLGWDKTHNMPVGAGMYNVGNTCYLNSTLQALFHVPALVNWLLS 155          
BLAST of mRNA_H-paniculata_contig79354.15964.1 vs. uniprot
Match: A0A8C4QXI4_EPTBU (Ubiquitin specific peptidase 42 n=1 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4QXI4_EPTBU)

HSP 1 Score: 48.5 bits (114), Expect = 4.110e-5
Identity = 22/46 (47.83%), Postives = 31/46 (67.39%), Query Frame = 0
Query:    8 KTKLEWEQEHRSGLGPGMKNLRNTCFINSFLQGLAHIPSVAQYFMD 53
            K +L+WE+E   G+G G+ NL NTCF+NS LQ L + P +A Y + 
Sbjct:   26 KLRLKWERER--GVGAGLYNLGNTCFLNSTLQCLTYTPPLANYLLS 69          
BLAST of mRNA_H-paniculata_contig79354.15964.1 vs. uniprot
Match: A0A672URC5_STRHB (USP domain-containing protein n=1 Tax=Strigops habroptila TaxID=2489341 RepID=A0A672URC5_STRHB)

HSP 1 Score: 48.1 bits (113), Expect = 4.870e-5
Identity = 20/48 (41.67%), Postives = 32/48 (66.67%), Query Frame = 0
Query:    6 IIKTKLEWEQEHRSGLGPGMKNLRNTCFINSFLQGLAHIPSVAQYFMD 53
            + +  L+WE+ HR  +G G++NL NTCF+NS +Q L + P +A Y + 
Sbjct:   83 VERLSLKWEKVHR--IGAGLRNLGNTCFLNSTVQCLTYTPPLANYLLS 128          
BLAST of mRNA_H-paniculata_contig79354.15964.1 vs. uniprot
Match: A0A672URD1_STRHB (USP domain-containing protein n=1 Tax=Strigops habroptila TaxID=2489341 RepID=A0A672URD1_STRHB)

HSP 1 Score: 48.1 bits (113), Expect = 4.920e-5
Identity = 20/48 (41.67%), Postives = 32/48 (66.67%), Query Frame = 0
Query:    6 IIKTKLEWEQEHRSGLGPGMKNLRNTCFINSFLQGLAHIPSVAQYFMD 53
            + +  L+WE+ HR  +G G++NL NTCF+NS +Q L + P +A Y + 
Sbjct:   87 VERLSLKWEKVHR--IGAGLRNLGNTCFLNSTVQCLTYTPPLANYLLS 132          
BLAST of mRNA_H-paniculata_contig79354.15964.1 vs. uniprot
Match: A0A672UQQ1_STRHB (USP domain-containing protein n=1 Tax=Strigops habroptila TaxID=2489341 RepID=A0A672UQQ1_STRHB)

HSP 1 Score: 48.1 bits (113), Expect = 4.940e-5
Identity = 20/48 (41.67%), Postives = 32/48 (66.67%), Query Frame = 0
Query:    6 IIKTKLEWEQEHRSGLGPGMKNLRNTCFINSFLQGLAHIPSVAQYFMD 53
            + +  L+WE+ HR  +G G++NL NTCF+NS +Q L + P +A Y + 
Sbjct:   88 VERLSLKWEKVHR--IGAGLRNLGNTCFLNSTVQCLTYTPPLANYLLS 133          
BLAST of mRNA_H-paniculata_contig79354.15964.1 vs. uniprot
Match: A0A1Y1Z831_9FUNG (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Z831_9FUNG)

HSP 1 Score: 48.1 bits (113), Expect = 5.590e-5
Identity = 22/49 (44.90%), Postives = 29/49 (59.18%), Query Frame = 0
Query:    5 TIIKTKLEWEQEHRSGLGPGMKNLRNTCFINSFLQGLAHIPSVAQYFMD 53
            TI K +L        G+GPG+ NL NTCF+NS LQ L + P +A Y  +
Sbjct:   53 TIFKKELSQTWGKEFGVGPGLNNLGNTCFMNSVLQCLTYTPPLASYLFN 101          
BLAST of mRNA_H-paniculata_contig79354.15964.1 vs. uniprot
Match: UPI0011CF13F3 (ubiquitin carboxyl-terminal hydrolase 36 n=1 Tax=Strigops habroptila TaxID=2489341 RepID=UPI0011CF13F3)

HSP 1 Score: 48.1 bits (113), Expect = 5.620e-5
Identity = 20/48 (41.67%), Postives = 32/48 (66.67%), Query Frame = 0
Query:    6 IIKTKLEWEQEHRSGLGPGMKNLRNTCFINSFLQGLAHIPSVAQYFMD 53
            + +  L+WE+ HR  +G G++NL NTCF+NS +Q L + P +A Y + 
Sbjct:  102 VERLSLKWEKVHR--IGAGLRNLGNTCFLNSTVQCLTYTPPLANYLLS 147          
BLAST of mRNA_H-paniculata_contig79354.15964.1 vs. uniprot
Match: UPI0011CF1D16 (ubiquitin carboxyl-terminal hydrolase 36-like isoform X1 n=2 Tax=Strigops habroptila TaxID=2489341 RepID=UPI0011CF1D16)

HSP 1 Score: 48.1 bits (113), Expect = 5.630e-5
Identity = 20/48 (41.67%), Postives = 32/48 (66.67%), Query Frame = 0
Query:    6 IIKTKLEWEQEHRSGLGPGMKNLRNTCFINSFLQGLAHIPSVAQYFMD 53
            + +  L+WE+ HR  +G G++NL NTCF+NS +Q L + P +A Y + 
Sbjct:  132 VERLSLKWEKVHR--IGAGLRNLGNTCFLNSTVQCLTYTPPLANYLLS 177          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig79354.15964.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A1E1IXG3_LEIGU1.630e-847.17Ubiquitin carboxyl-terminal hydrolase n=4 Tax=Vian... [more]
A0A6H5JJN5_9PHAE4.170e-848.00USP domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7M7GC60_NASVI4.110e-539.13Ubiquitin carboxyl-terminal hydrolase n=4 Tax=Pter... [more]
A0A8C4QXI4_EPTBU4.110e-547.83Ubiquitin specific peptidase 42 n=1 Tax=Eptatretus... [more]
A0A672URC5_STRHB4.870e-541.67USP domain-containing protein n=1 Tax=Strigops hab... [more]
A0A672URD1_STRHB4.920e-541.67USP domain-containing protein n=1 Tax=Strigops hab... [more]
A0A672UQQ1_STRHB4.940e-541.67USP domain-containing protein n=1 Tax=Strigops hab... [more]
A0A1Y1Z831_9FUNG5.590e-544.90Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Basi... [more]
UPI0011CF13F35.620e-541.67ubiquitin carboxyl-terminal hydrolase 36 n=1 Tax=S... [more]
UPI0011CF1D165.630e-541.67ubiquitin carboxyl-terminal hydrolase 36-like isof... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolasePFAMPF00443UCHcoord: 24..52
e-value: 2.8E-7
score: 30.3
NoneNo IPR availableGENE3D3.90.70.10coord: 10..53
e-value: 8.4E-10
score: 40.0
IPR028889Ubiquitin specific protease domainPROSITEPS50235USP_3coord: 23..53
score: 10.563
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 21..52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig79354contigH-paniculata_contig79354:338..496 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig79354.15964.1mRNA_H-paniculata_contig79354.15964.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig79354 338..496 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig79354.15964.1 ID=prot_H-paniculata_contig79354.15964.1|Name=mRNA_H-paniculata_contig79354.15964.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=53bp
ICKDTIIKTKLEWEQEHRSGLGPGMKNLRNTCFINSFLQGLAHIPSVAQY
FMD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001394Peptidase_C19_UCH
IPR028889USP_dom
IPR038765Papain-like_cys_pep_sf