prot_H-paniculata_contig7911.15939.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7911.15939.1
Unique Nameprot_H-paniculata_contig7911.15939.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length175
Homology
BLAST of mRNA_H-paniculata_contig7911.15939.1 vs. uniprot
Match: A0A6H5J897_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J897_9PHAE)

HSP 1 Score: 120 bits (300), Expect = 2.820e-28
Identity = 71/175 (40.57%), Postives = 104/175 (59.43%), Query Frame = 0
Query:    3 KFTMIDFGDVAQILGIDITQDKERGTISVSHHHDVVSLQKKFDMDDSNPVHTPGTGMELTVKPEGSVLLDEHGRRDYQAIVGSLIFLIQSTRMDIAFVVSQAARFMVNPTSVHMGSVKRILRYLNGMSNLKLSYSCDSNFELTGFCDASY--SNVNPEKRTSTSGSMYFLFGGVV 175
            KF M D G    +LG++I+Q    G I VS H  V+++  K+ M D  P  TPG+G E+  +PE ++ L E  ++ YQ IVGSL+FL  +TR +I + V    R M  PT+ HM   KR+LRYL G  ++ L +     ++L  +CDAS+  S+   +KR+ST G ++ L GGVV
Sbjct:  411 KFKMTDGGPAELLLGMEISQSD--GEIIVSQHKYVMNILDKYQMVDCKPAATPGSGPEIEQEPENAIYLSEEDKKLYQGIVGSLLFLTNTTRWEIGYAVMVLCRGMNKPTNQHMVGAKRVLRYLRGCPDMPLKFR-RGQWDLKCYCDASFAGSSERLQKRSST-GYIFILAGGVV 581          
BLAST of mRNA_H-paniculata_contig7911.15939.1 vs. uniprot
Match: A0A1J3CVC5_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3CVC5_NOCCA)

HSP 1 Score: 112 bits (279), Expect = 2.120e-25
Identity = 67/177 (37.85%), Postives = 99/177 (55.93%), Query Frame = 0
Query:    2 AKFTMIDFGDVAQILGIDITQDKERGTISVSHHHDVVSLQKKFDMDDSNPVHTP-GTGMELTVKPEGSVL--LDEHGRRDYQAIVGSLIFLIQSTRMDIAFVVSQAARFMVNPTSVHMGSVKRILRYLNGMSNLKLSYSCDSNFELTGFCDASYSNVNPEKRTSTSGSMYFLFGGVV 175
            ++F M D G+  +ILG++IT+D+ +GT+++S    V  +   F MD S  V T  G         E  +    ++  +  YQ+ VGSL++ +  TR D+A+ V    RFM NP   H   VK ILRYLNG + +KLSY  D  F L G+CDA Y+  + +KR S SG ++ L G  +
Sbjct: 1072 SEFEMKDLGEAKKILGMEITRDRVKGTLTISQEGYVKKVLGNFGMDQSKSVSTAMGAHFRFMAATEDELQDQREDMEKIPYQSAVGSLMYSMIGTRPDLAYSVGLVCRFMSNPIKEHWLGVKWILRYLNGTTEMKLSYRNDGEFVLKGYCDADYA-ADLDKRRSISGVVFTLGGNTI 1247          
BLAST of mRNA_H-paniculata_contig7911.15939.1 vs. uniprot
Match: A0A6H5KY84_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY84_9PHAE)

HSP 1 Score: 109 bits (273), Expect = 1.350e-24
Identity = 60/150 (40.00%), Postives = 88/150 (58.67%), Query Frame = 0
Query:    3 KFTMIDFGDVAQILGIDITQDKERGTISVSHHHDVVSLQKKFDMDDSNPVHTPGTGMELTVKPEGSVLLDEHGRRDYQAIVGSLIFLIQSTRMDIAFVVSQAARFMVNPTSVHMGSVKRILRYLNGMSNLKLSYSCDSNFELTGFCDASY 152
            KF M D G    +LG++I+Q    G I VS H  V+++  K+ M D  P  TPG+G E+  +PE ++ L E  ++ YQ IVGSL+FL  +TR +I + V    R M  PT+ HM   KR+LRYL G  ++ L +     ++L  +CDAS+
Sbjct: 1111 KFKMTDGGPAELLLGMEISQSD--GEIIVSQHKYVMNILDKYQMVDCKPAATPGSGPEIEQEPENAIYLSEEDKKLYQGIVGSLLFLTNTTRWEIGYAVMVLCRGMNKPTNQHMVGAKRVLRYLRGCPDMPLKFR-RGQWDLKCYCDASF 1257          
BLAST of mRNA_H-paniculata_contig7911.15939.1 vs. uniprot
Match: A0A0J7NHJ8_LASNI (Gag-pol polyprotein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7NHJ8_LASNI)

HSP 1 Score: 107 bits (267), Expect = 8.540e-24
Identity = 59/176 (33.52%), Postives = 100/176 (56.82%), Query Frame = 0
Query:    3 KFTMIDFGDVAQILGIDITQDKERGTISVSHHHDVVSLQKKFDMDDSNPVHTPGTG---MELTVKPEGSVLLDEHGRRDYQAIVGSLIFLIQSTRMDIAFVVSQAARFMVNPTSVHMGSVKRILRYLNGMSNLKLSYSCDSNFELTGFCDASYSNVNPEKRTSTSGSMYFLFGGVV 175
            KF M D G V  +LG+ + +D+E+G I ++    + ++ ++F+M D NP  TP      ++ ++ P+    + +  +  Y+  +GS++FL Q TR DIA  ++  + +  NP   H  +VKR+ RYL G  N  L YS D+N  L GFCDA ++    ++R ST+G ++ L G  +
Sbjct: 1008 KFEMKDLGAVRNLLGMQVHRDREQGKIFINQATYIDNILRRFNMCDCNPARTPSDPNQRLDKSMAPKSPDEVKDMEKVPYREALGSMMFLCQGTRPDIAHAITSLSVYSENPGKAHWAAVKRLFRYLKGTRNYGLIYSRDTNPTLQGFCDADWAGDTNDRR-STTGYLFTLQGAAL 1182          
BLAST of mRNA_H-paniculata_contig7911.15939.1 vs. uniprot
Match: UPI0018A7F5F8 (secreted RxLR effector protein 161-like n=1 Tax=Lucilia sericata TaxID=13632 RepID=UPI0018A7F5F8)

HSP 1 Score: 102 bits (253), Expect = 9.790e-24
Identity = 60/161 (37.27%), Postives = 90/161 (55.90%), Query Frame = 0
Query:    4 FTMIDFGDVAQILGIDITQDKERGTISVSHHHDVVSLQKKFDMDDSNPVHTP-GTGMELTVKPEGSVLLDEHGRRDYQAIVGSLIFLIQSTRMDIAFVVSQAARFMVNPTSVHMGSVKRILRYLNGMSNLKLSYSCDSNFELTGFCDASYSNVNPEKRTST 163
            F + D GDV   +G+ IT+++E+G I +     +  + K+F M DS P+ TP     +LT     S   D      YQ  +GSL++L+Q TR DIAF V+  ++F  N  + H  +VKRI RY+ G  N+KL +S   N  + GFCDA Y+    ++R+ T
Sbjct:    2 FLLNDLGDVKCCVGLRITRNREQGEIYIDKSVYIEDILKRFKMIDSKPISTPFDINTKLTTPTHKSPDFDNI---PYQEAIGSLLYLVQGTRPDIAFAVNHLSKFNNNFDNSHWTAVKRIFRYIKGTMNVKLCFSKIENPNIFGFCDADYAGDVTDRRSCT 159          
BLAST of mRNA_H-paniculata_contig7911.15939.1 vs. uniprot
Match: UPI001F4FE57C (secreted RxLR effector protein 161-like n=1 Tax=Schistocerca americana TaxID=7009 RepID=UPI001F4FE57C)

HSP 1 Score: 100 bits (248), Expect = 1.630e-23
Identity = 56/152 (36.84%), Postives = 87/152 (57.24%), Query Frame = 0
Query:    6 MIDFGDVAQILGIDITQDKERGTISVSHHHDVVSLQKKFDMDDSNPVHTPGTGMELTVKPEGSVLLDEH---GRRDYQAIVGSLIFLIQSTRMDIAFVVSQAARFMVNPTSVHMGSVKRILRYLNGMSNLKLSYSCDSNFELTGFCDASYSN 154
            M D G+++  LG+ I +++++GTIS+       ++ KKF M+  NP   P        K E  +  +E+    R  YQ  VGSL++L QSTR DIA+ V   +RF  N  ++H  +VKRI+RY+ G  N+ L++      E+ GFCDA Y++
Sbjct:    1 MTDVGELSWCLGVRIKRNRKQGTISIDKRKYAANILKKFGMEHCNPFAYPFESDSKLQKCENKLTDEENLVLHRIPYQQAVGSLLYLAQSTRPDIAYAVGVLSRFNSNYRNIHWEAVKRIIRYIKGTVNVGLTFRKSGTTEIEGFCDADYAS 152          
BLAST of mRNA_H-paniculata_contig7911.15939.1 vs. uniprot
Match: A0A8I6TLX8_CIMLE (Integrase catalytic domain-containing protein n=1 Tax=Cimex lectularius TaxID=79782 RepID=A0A8I6TLX8_CIMLE)

HSP 1 Score: 105 bits (263), Expect = 2.830e-23
Identity = 64/178 (35.96%), Postives = 103/178 (57.87%), Query Frame = 0
Query:    3 KFTMIDFGDVAQILGIDITQDKERGTISVSHHHDVVSLQKKFDMDDSNPVHTPGTGMELTVKPEGSVLLDEHGRR-----DYQAIVGSLIFLIQSTRMDIAFVVSQAARFMVNPTSVHMGSVKRILRYLNGMSNLKLSYSCDSNFELTGFCDASYSNVNPEKRTSTSGSMYFLFGGVV 175
            +F+M + G+V   LG++IT+D++ G + ++    +  + +KF M ++NPV TP   ME  +     V  D +  +      YQ  +GSL+++ Q +R DIAF V+  ++F  NP   H  +VKR++RYL G S+LKL +S + N  L  F DA + N N + R S SGS +   GG++
Sbjct:  578 EFSMKNLGEVKDCLGMNITRDRKLGKLWINQTTYIKKIIEKFGMSEANPVLTP---MEPGIILRELVKSDVNSAQCNDSVPYQQAIGSLLYVSQISRPDIAFAVNSLSQFNNNPLKCHWQAVKRVIRYLKGTSDLKLEFSKNENSNLLCFSDADWGNKNND-RHSVSGSSFKYMGGLI 751          
BLAST of mRNA_H-paniculata_contig7911.15939.1 vs. uniprot
Match: A0A177T2L8_9BASI (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Tilletia caries TaxID=13290 RepID=A0A177T2L8_9BASI)

HSP 1 Score: 104 bits (259), Expect = 7.370e-23
Identity = 66/177 (37.29%), Postives = 93/177 (52.54%), Query Frame = 0
Query:    1 MAKFTMIDFGDVAQILGIDITQDKERGTISVSHHHDVVSLQKKFDMDDSNPVHTPGTGMELTVKP-EGSVLLDEHGRRDYQAIVGSLIFLIQSTRMDIAFVVSQAARFMVNPTSVHMGSVKRILRYLNGMSNLKLSYSCD-SNFELTGFCDASYSNVNPEKRTSTSGSMYFLFGGVV 175
            +  F   D       LGI I QDKE+GTI++        +  +F    SNP  TP    +   K  EG +  D      Y+AIVG L +L Q TR D+AF VS   +F  +PT  HM + KR+LRY+ G +  KL++  D S  E+ G+ DA ++  + + R STSG +Y + GG V
Sbjct:  214 LTLFKGTDLEPAHHCLGIQIVQDKEKGTITIDQERYAEEVLARFGFSTSNPTSTPLCSKKALRKATEGDLRCDPS---IYRAIVGCLAYLAQGTRPDLAFAVSTLGKFSSDPTEEHMEAAKRVLRYIRGTAGAKLTFGGDRSEEEVEGYVDADWA-ADRDDRRSTSGFVYTMAGGAV 386          
BLAST of mRNA_H-paniculata_contig7911.15939.1 vs. uniprot
Match: A0A4S4LS10_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Antrodiella citrinella TaxID=2447956 RepID=A0A4S4LS10_9APHY)

HSP 1 Score: 102 bits (254), Expect = 8.140e-23
Identity = 64/178 (35.96%), Postives = 101/178 (56.74%), Query Frame = 0
Query:    1 MAKFTMIDFGDVAQILGIDITQDKERGTISVSHHHDVVSLQKKFDMDDSNPVHTP-GTGMELTVKPEGSVLLDEHGRRD--YQAIVGSLIFLIQSTRMDIAFVVSQAARFMVNPTSVHMGSVKRILRYLNGMSNLKLSYSCDSNFELTGFCDASYSNVNPEKRTSTSGSMYFLFGGVV 175
            + +F + D G + Q+LG+ IT+D+ + T+S+S     + +  KF+M D  PV TP   G +L+ K   +   +    +D  Y   VG+L++L  +TR DIA  VS  ARF  NP   H  +VK ++RYL G  ++KL+YS +S F L+ + DA ++  N +   STSG +  +  G V
Sbjct:   49 LKRFKLRDLGPINQLLGVQITRDRSKRTLSLSQRQYTLDILAKFNMADCRPVGTPLDPGAKLSTKMSPTTDAERASMKDIPYINAVGALMYLATATRPDIANTVSTLARFSSNPGMAHWNAVKHLMRYLQGTLDMKLTYSPNSEF-LSVYSDADHAG-NLDNGKSTSGYVLKIGSGAV 224          
BLAST of mRNA_H-paniculata_contig7911.15939.1 vs. uniprot
Match: A0A6A6M254_HEVBR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=A0A6A6M254_HEVBR)

HSP 1 Score: 100 bits (249), Expect = 9.090e-23
Identity = 63/168 (37.50%), Postives = 96/168 (57.14%), Query Frame = 0
Query:    3 KFTMIDFGDVAQILGIDITQDKERGTISVSHHHDVVSLQKKFDMDDSNPVHTPGTGMELTVKPEGSVLLDEHGRRDYQAIVGSLIFLIQSTRMDIAFVVSQAARFMVNPTSVHMGSVKRILRYLNGMSNLKLSYSCDSNFELTGFCDASYSNVNPEKRTSTSGSMYFL 170
            +F M D G ++  LG+++TQ+     I +S    V  L  KF M D NPV TP    +     +G   +D H    Y++++GSL++L  +TR DI    S  +RFM NP+ +H G+ +R+LRYL G S+  L YS  +N EL GF D+ ++  + + R STSG ++ L
Sbjct:   69 EFEMTDLGLMSYFLGLEVTQNG--AGIFLSQEKYVKDLLMKFQMQDCNPVKTPVNTNQKFSLEDGENKIDGH---TYRSLIGSLLYLT-NTRPDIMQAASLLSRFMQNPSKIHYGAARRVLRYLKGTSSYGLWYSNANNLELCGFSDSDWAG-SLDDRKSTSGYVFHL 229          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7911.15939.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J897_9PHAE2.820e-2840.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1J3CVC5_NOCCA2.120e-2537.85Retrovirus-related Pol polyprotein from transposon... [more]
A0A6H5KY84_9PHAE1.350e-2440.00Integrase catalytic domain-containing protein n=1 ... [more]
A0A0J7NHJ8_LASNI8.540e-2433.52Gag-pol polyprotein n=1 Tax=Lasius niger TaxID=677... [more]
UPI0018A7F5F89.790e-2437.27secreted RxLR effector protein 161-like n=1 Tax=Lu... [more]
UPI001F4FE57C1.630e-2336.84secreted RxLR effector protein 161-like n=1 Tax=Sc... [more]
A0A8I6TLX8_CIMLE2.830e-2335.96Integrase catalytic domain-containing protein n=1 ... [more]
A0A177T2L8_9BASI7.370e-2337.29Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A4S4LS10_9APHY8.140e-2335.96Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6A6M254_HEVBR9.090e-2337.50Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 79..175
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 79..175

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7911contigH-paniculata_contig7911:3303..3827 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7911.15939.1mRNA_H-paniculata_contig7911.15939.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7911 2982..3827 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7911.15939.1 ID=prot_H-paniculata_contig7911.15939.1|Name=mRNA_H-paniculata_contig7911.15939.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=175bp
MAKFTMIDFGDVAQILGIDITQDKERGTISVSHHHDVVSLQKKFDMDDSN
PVHTPGTGMELTVKPEGSVLLDEHGRRDYQAIVGSLIFLIQSTRMDIAFV
VSQAARFMVNPTSVHMGSVKRILRYLNGMSNLKLSYSCDSNFELTGFCDA
SYSNVNPEKRTSTSGSMYFLFGGVV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like