prot_H-paniculata_contig78942.15916.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig78942.15916.1
Unique Nameprot_H-paniculata_contig78942.15916.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length52
Homology
BLAST of mRNA_H-paniculata_contig78942.15916.1 vs. uniprot
Match: D7G6Q1_ECTSI (CCHC-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6Q1_ECTSI)

HSP 1 Score: 74.3 bits (181), Expect = 1.300e-14
Identity = 39/54 (72.22%), Postives = 41/54 (75.93%), Query Frame = 0
Query:    1 MFLDEQSRKGSKSGIAGRGFAMATTTSG--TYFECGENGHIRRNCPRKRGKGRM 52
            M LDEQSRKGSK GIAGRGF M TT S   T F CGE GHIRRNC ++RGKGR 
Sbjct:   78 MALDEQSRKGSKGGIAGRGFPMVTTASEQETCFGCGEKGHIRRNCLQRRGKGRQ 131          
BLAST of mRNA_H-paniculata_contig78942.15916.1 vs. uniprot
Match: A0A6H5JSB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSB5_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 2.760e-13
Identity = 36/52 (69.23%), Postives = 41/52 (78.85%), Query Frame = 0
Query:    1 MFLDEQSRKGSKSGIAGRGFAMATTTSG--TYFECGENGHIRRNCPRKRGKG 50
            MFLDEQSRKG KS IAG GFA+ TTTS   T F+CGE GHIR +CP ++GKG
Sbjct:  158 MFLDEQSRKGPKSRIAGGGFALTTTTSEGPTCFDCGEKGHIRSSCPERKGKG 209          
BLAST of mRNA_H-paniculata_contig78942.15916.1 vs. uniprot
Match: A0A6H5KW66_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW66_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 2.770e-13
Identity = 37/53 (69.81%), Postives = 39/53 (73.58%), Query Frame = 0
Query:    1 MFLDEQSRKGSKSGIAGRGFAMATTTSG--TYFECGENGHIRRNCPRKRGKGR 51
            MFLDEQSR G K  IAGRGFAM  TTS   T F+CGE GHI RNC  KRGKG+
Sbjct:  193 MFLDEQSRNGPKGSIAGRGFAMTATTSEEPTCFDCGEKGHIWRNCSEKRGKGK 245          
BLAST of mRNA_H-paniculata_contig78942.15916.1 vs. uniprot
Match: A0A6H5JYP5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYP5_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 4.150e-13
Identity = 36/51 (70.59%), Postives = 41/51 (80.39%), Query Frame = 0
Query:    1 MFLDEQSRKGSKSGIAGRGFAMATTTSG--TYFECGENGHIRRNCPRKRGK 49
            MFLDEQSRK SK GIAGR FAM TTTS   ++F CGE  HIRRNCP++RG+
Sbjct:   72 MFLDEQSRKWSKGGIAGRDFAMVTTTSEQTSHFGCGEKRHIRRNCPQRRGQ 122          
BLAST of mRNA_H-paniculata_contig78942.15916.1 vs. uniprot
Match: A0A6H5K523_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K523_9PHAE)

HSP 1 Score: 70.9 bits (172), Expect = 5.170e-13
Identity = 36/53 (67.92%), Postives = 40/53 (75.47%), Query Frame = 0
Query:    1 MFLDEQSRKGSKSGIAGRGFAMATTTSGTY-FECGENGHIRRNCPRKRGKGRM 52
            +FLDEQ RK +K  IAGRGFAMAT TSG   FEC E GH+RRNCP +R KG M
Sbjct:  171 IFLDEQMRKRTKGQIAGRGFAMATKTSGPICFECNEPGHVRRNCPNRRRKGHM 223          
BLAST of mRNA_H-paniculata_contig78942.15916.1 vs. uniprot
Match: A0A6H5JC59_9PHAE (gag_pre-integrs domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC59_9PHAE)

HSP 1 Score: 69.7 bits (169), Expect = 1.320e-12
Identity = 34/51 (66.67%), Postives = 40/51 (78.43%), Query Frame = 0
Query:    1 MFLDEQSRKGSKSGIAGRGFAMATTTSGT-YFECGENGHIRRNCPRKRGKG 50
            +FLDEQ RK +K  IAGRGFAMAT TSG  YFEC E GH+RRNCP ++ +G
Sbjct:  213 IFLDEQMRKRTKGQIAGRGFAMATKTSGPIYFECNEQGHVRRNCPNRQREG 263          
BLAST of mRNA_H-paniculata_contig78942.15916.1 vs. uniprot
Match: A0A6H5JKA6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKA6_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 2.460e-12
Identity = 34/51 (66.67%), Postives = 40/51 (78.43%), Query Frame = 0
Query:    1 MFLDEQSRKGSKSGIAGRGFAMATTTSGTY-FECGENGHIRRNCPRKRGKG 50
            +FLDEQ RKG+K  IAGRGFAMAT TSG   FEC E GH+RRNCP ++ +G
Sbjct:  213 IFLDEQMRKGTKGQIAGRGFAMATKTSGPICFECNEPGHVRRNCPNRQREG 263          
BLAST of mRNA_H-paniculata_contig78942.15916.1 vs. uniprot
Match: A0A6H5JXA1_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXA1_9PHAE)

HSP 1 Score: 66.6 bits (161), Expect = 9.540e-12
Identity = 34/53 (64.15%), Postives = 40/53 (75.47%), Query Frame = 0
Query:    1 MFLDEQSRKGSKSGIAGRGFAMATTTSGTY-FECGENGHIRRNCPRKRGKGRM 52
            +FLDEQ RK +K  IAGRGFAMAT TSG   FEC E GH+RRNC  ++ +GRM
Sbjct:  213 IFLDEQMRKRTKGQIAGRGFAMATKTSGPICFECNEPGHVRRNCSNRQREGRM 265          
BLAST of mRNA_H-paniculata_contig78942.15916.1 vs. uniprot
Match: A0A6H5K9W5_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9W5_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 2.790e-11
Identity = 34/53 (64.15%), Postives = 39/53 (73.58%), Query Frame = 0
Query:    1 MFLDEQSRKGSKSGIAGRGFAMATTTSGTY-FECGENGHIRRNCPRKRGKGRM 52
            +FLDEQ RK +K  IAGRGFAMAT TSG   FEC E  H+RRNCP ++ KG M
Sbjct:  177 IFLDEQMRKRTKGQIAGRGFAMATKTSGPICFECHEPRHVRRNCPNRQRKGHM 229          
BLAST of mRNA_H-paniculata_contig78942.15916.1 vs. uniprot
Match: A0A6H5KMR7_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMR7_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 2.840e-11
Identity = 33/51 (64.71%), Postives = 39/51 (76.47%), Query Frame = 0
Query:    1 MFLDEQSRKGSKSGIAGRGFAMATTTSGTY-FECGENGHIRRNCPRKRGKG 50
            +FLDEQ RK +K  IAGRGFAMAT TSG   FEC E GH+RRNCP ++ +G
Sbjct:  213 IFLDEQMRKRTKGQIAGRGFAMATKTSGPICFECNEPGHVRRNCPNRQREG 263          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig78942.15916.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6Q1_ECTSI1.300e-1472.22CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JSB5_9PHAE2.760e-1369.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KW66_9PHAE2.770e-1369.81CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JYP5_9PHAE4.150e-1370.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K523_9PHAE5.170e-1367.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JC59_9PHAE1.320e-1266.67gag_pre-integrs domain-containing protein (Fragmen... [more]
A0A6H5JKA6_9PHAE2.460e-1266.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JXA1_9PHAE9.540e-1264.15CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K9W5_9PHAE2.790e-1164.15CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KMR7_9PHAE2.840e-1164.71CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 31..44
e-value: 1.5E-4
score: 21.7
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 31..45
score: 8.763
NoneNo IPR availableGENE3D4.10.60.10coord: 24..52
e-value: 1.1E-6
score: 30.2
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 24..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig78942contigH-paniculata_contig78942:342..497 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig78942.15916.1mRNA_H-paniculata_contig78942.15916.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig78942 339..497 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig78942.15916.1 ID=prot_H-paniculata_contig78942.15916.1|Name=mRNA_H-paniculata_contig78942.15916.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=52bp
MFLDEQSRKGSKSGIAGRGFAMATTTSGTYFECGENGHIRRNCPRKRGKG
RM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR036875Znf_CCHC_sf