prot_H-paniculata_contig7893.15914.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7893.15914.1
Unique Nameprot_H-paniculata_contig7893.15914.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length565
Homology
BLAST of mRNA_H-paniculata_contig7893.15914.1 vs. uniprot
Match: D7FKE8_ECTSI (Swi3 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKE8_ECTSI)

HSP 1 Score: 225 bits (574), Expect = 3.620e-63
Identity = 207/529 (39.13%), Postives = 268/529 (50.66%), Query Frame = 0
Query:   54 EEKKASKRI--KIPAFSENNLITAKGLTKIYEDFPQKCQYKGRGREAEFLRGLMVAYKEWGYQLYRALAFEDLASRTEKLGGKGRTREFLRELRDKERDRVLKVEVGKSAKDDVRAEEAANRA---DQVNSADGGDVEKQKDSEEVETRLANSRY-MDVDEEGEGEREHPSDKGPGSRSKFAAAPVVGALSVEVRARMEANRRLALERLRRKKEEAASALSTSSAGAIVGKSISATPLAADIIGKGVTEDDLMHLDAEELNGEPQDNFEDDEAALAEMEAEEPATKKSKLSVDTATPATTLLESNISCSLDKTFAPKIFEVPSLAVDTLPGST---ERSPVDGDGGATHGLSTAPTDEATVSGRTGNGVVGKAVAPKPEGIDEGSTPTAHPAGSESSKRETTASKMCIPA--TSGDQEIYKGDVKSAEALTEKAAKAA-ADGSNG--RKDKGISSNTAAAFGVMTGSVKNVGEILLAVS-PQKCKATE----SEVPMSPLGRMLADTDIPAEGGSLAVRVPIAGLSADK 563
            EE   +K++  + PAFSEN+L+  KGL +IY+DFPQKCQYKGRGREAEFLRGLMVAYKEWGYQLY  +AFEDLA RTEKLGG+ RTR  LRELRD ERDRVL+ + G+ A DDV A+EAA  A    +  +A+G  VE+++D E     LA SRY M+VD  G+G  E  SD+      + AA      +S +VR R+EANRRLAL+RLR KK+E                                 E+DLM +D     G P D+F+DDEAALA+MEAEE A +   ++ + +    T+ E                     AV T P ST   ER       G    +  A    A  + R+G               + G+T     AG ES      AS+   PA    G +E    + ++A   T  AA AA ADG  G  + D  +                       + S P KC+       S +P+SPLG + A TD+ AEGG    R P+ GL +D+
Sbjct:   50 EEATTAKKVSNRPPAFSENHLVKEKGLWQIYKDFPQKCQYKGRGREAEFLRGLMVAYKEWGYQLYPGVAFEDLACRTEKLGGRARTRSLLRELRDTERDRVLEAKYGREAVDDVHAQEAARLAAKESKTAAAEGDRVEEREDEE-----LAGSRYAMEVD--GDGGDEGKSDR------QVAAEGSAATMSDQVRQRIEANRRLALDRLRLKKQEXXXXXXXXXXXXXXXXXXXXXXXNDGSREVEDPEEDLMDVDG---GGGPGDSFDDDEAALADMEAEEMAARP--VAAEASRGKNTVAEPG-----------------PAAVVTSPPSTLAVERGARAAGAGCAGSVDEASAKCAVAAARSG---------------EPGTT-----AGEESGGELPPASEPSAPAPGVGGGRERDGANDEAASLGTTAAASAAGADGITGGAKLDDAVLGXXXXXXXXXXXXXXXXXXXXASFSSPAKCRXXXXXXASGLPLSPLGSLFAGTDVSAEGGLAVAREPLGGLFSDE 523          
BLAST of mRNA_H-paniculata_contig7893.15914.1 vs. uniprot
Match: A0A6H5L0P4_9PHAE (Swi3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0P4_9PHAE)

HSP 1 Score: 224 bits (572), Expect = 2.900e-62
Identity = 209/561 (37.25%), Postives = 281/561 (50.09%), Query Frame = 0
Query:   56 KKASKRIKIPAFSENNLITAKGLTKIYEDFPQKCQYKGRGREAEFLRGLMVAYKEWGYQLYRALAFEDLASRTEKLGGKGRTREFLRELRDKERDRVLKVEVGKSAKDDVRAEEAANRA---DQVNSADGGDVEKQKDSEEVETRLANSRY-MDVDEEGEGEREHPSDKGPGSRSKFAAAPVVGALSVEVRARMEANRRLALERLRRKKEEAASALSTSSAGAIVGKSISATPL--AADIIGKGVT--EDDLMHLDAEELNGEPQDNFEDDEAALAEMEAEEPATKKSKLSVDTATPATTLLESN---ISCSLDKTFAPKIFEVPSLAVDTL----PGSTERSPVDGDGGATHGLSTAPTDEATVSGRTGNGVVGKAVAPKPEGIDEGSTPTAHPAGSESSKRETTASKMCIPATSGDQEIYKGDVKSAEALTEKAAKAAADGSNGRKDKGISSNTAAAFGVMT-------------GSVKNVGEILLAV----------------------SPQKCK---ATESEVPMSPLGRMLADTDIPAEGGSLAVRVPIAGLSADK 563
            KK S R   PAFSEN+L+  KGL ++Y+DFPQKC+YKGRGREAEFLRGLMVAYKEWGYQLY  +AFEDLASRTEKL G+ RTR  +RELRD ERDRVL+ + G+ A DDV ++EAA  A    +  +A+G   E+++D E      A SRY M+VD  G+G  E  SD+      + AA     A+S +VR R+EANRRLAL+RLR KK EA+ A                     AA+   + V   E+DLM +D     G P D F+DDEAALA+ME E+ A +   ++ + +    T+ E     +S S   T A +  E      + L    P   E   ++  G    G +TA    A V+    +     A A   +G+  G    A  AG   +  E  A+     A  G+ +   G+    E            G  G +D+  +++ AA+   MT             G  K    +L                         SP KC+   A  S +P+SPLG + A TD+ AEGG   VR P+ GL +D+
Sbjct:   56 KKVSNRP--PAFSENHLVKEKGLWQVYKDFPQKCRYKGRGREAEFLRGLMVAYKEWGYQLYPGVAFEDLASRTEKLAGRARTRSLMRELRDTERDRVLEAKFGREAVDDVHSQEAARLAAKESKTAAAEGDRAEEREDEE-----FAGSRYTMEVD--GDGGDEGKSDR------QVAAEGSAAAMSEQVRQRIEANRRLALDRLRSKKHEASVAXXXXXXXXXXXXXXXXXXXXXAANDGSREVEDLEEDLMDVDG---GGGPGDGFDDDEAALADMETEQMAARP--VAAEASRRKNTVAEPGPAVVSTSPASTLAVESDETAGAVDEELAPPEPSIREDEAMEDTGSRASGANTAA---AVVADDAKDPAPVSAAA---DGVARGGARAAG-AGCAGNVDEAPATWAADAAGGGEPDATAGEESGGELPPASEPGTPGPGVGGGQDRDGANDEAASLRTMTAXXXXXXXXDGITGGAKVDDAVLXXXXXXXXAPEPVAAKGDEEGASFSSPAKCRSATAAASGLPLSPLGTLFAGTDVSAEGGLAVVREPLGGLFSDE 589          
BLAST of mRNA_H-paniculata_contig7893.15914.1 vs. uniprot
Match: A0A836CM34_9STRA (Swi3 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM34_9STRA)

HSP 1 Score: 106 bits (264), Expect = 2.330e-20
Identity = 58/106 (54.72%), Postives = 72/106 (67.92%), Query Frame = 0
Query:   56 KKASKRIKIPAFSENNLITAKGLTKIYEDFPQKCQYKGRGREAEFLRGLMVAYKEWGYQLYRALAFEDLASRTEKLGGKGRTREFLRELRDKERDRVLKVEVGKSA 161
            KK +KR + P FSE  L+  KGL KI +DFP++ +   +G+E EFL  LM  YKEWGYQLY +LAFEDLA R E LGGK R R  L  +RD+ERDR ++   GK A
Sbjct:   58 KKPAKR-RAPPFSEVQLVEGKGLMKIRDDFPKRLKPCVKGKEREFLSRLMFLYKEWGYQLYPSLAFEDLAVRIETLGGKERVRGHLAMMRDEERDRCVRARHGKDA 162          
BLAST of mRNA_H-paniculata_contig7893.15914.1 vs. uniprot
Match: A0A7S1TV66_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TV66_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 5.840e-13
Identity = 42/101 (41.58%), Postives = 59/101 (58.42%), Query Frame = 0
Query:   58 ASKRIKIPAFSENNLITAKGLTKIYEDFPQKCQYKGRGREAEFLRGLMVAYKEWGYQLYRALAFEDLASRTEKLGGKGRTREFLRELRDKERDRVLKVEVG 158
            A KR + P F E+ L +A GLTKI E+FP+  +++G G EAE L  ++  Y+EW +QLY +L +ED+  RT KL  K R +E     R   +   LK   G
Sbjct:   50 AKKRTRAPPFGESLLCSAAGLTKILEEFPRDLKFRGEGHEAEDLDRVLRLYREWAFQLYPSLHWEDVTDRTNKLRNKPRVKEIQENARLAAKASFLKQRYG 150          
BLAST of mRNA_H-paniculata_contig7893.15914.1 vs. uniprot
Match: A0A0P1APB5_PLAHL (Timeless-interacting protein isoform x3 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1APB5_PLAHL)

HSP 1 Score: 74.3 bits (181), Expect = 5.800e-12
Identity = 42/105 (40.00%), Postives = 60/105 (57.14%), Query Frame = 0
Query:   69 ENNLITAKGLTKIYEDFPQKCQYKGRGREAEFLRGLMVAYKEWGYQLYRALAFEDLASRTEKLGGKGRTREFLRELRDKERDRVLKVEVGKSAKD---DVRAEEA 170
            E++LI+A+G  K++  FP +      GREA+ L  L+  YK+W + LY  L FED   RTE LG   + +  + ELR+KER + LK  + +  KD   D   EEA
Sbjct:   55 ESHLISAEGFQKVHRTFPYQVSADVSGREAQALASLVKMYKQWAFDLYPGLNFEDFVERTETLGKGRQVQALMMELREKERLKYLKTIIDQDEKDEKADSEGEEA 159          
BLAST of mRNA_H-paniculata_contig7893.15914.1 vs. uniprot
Match: A0A484EHM7_BRELC (Swi3 domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EHM7_BRELC)

HSP 1 Score: 71.2 bits (173), Expect = 1.020e-10
Identity = 38/101 (37.62%), Postives = 58/101 (57.43%), Query Frame = 0
Query:   69 ENNLITAKGLTKIYEDFPQKCQYKGRGREAEFLRGLMVAYKEWGYQLYRALAFEDLASRTEKLGGKGRTREFLRELRDKERDRVLKVEVGKSAKDDVRAEE 169
            E++L++A+G  K++  FP +      GREA+ L  L+  YK+W Y LY  L FED A RTE L    + +  + ELR+KER + +K    +  + D + EE
Sbjct:   75 ESHLVSAEGFKKVHRTFPYQVSADVSGREAQALASLIRMYKQWAYDLYPGLNFEDFAERTEMLSKGHQVQGLMTELREKERLKFVKKREEEEGEGDEKIEE 175          
BLAST of mRNA_H-paniculata_contig7893.15914.1 vs. uniprot
Match: A0A2P4YEG9_9STRA (Swi3 domain-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YEG9_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 1.100e-10
Identity = 35/86 (40.70%), Postives = 51/86 (59.30%), Query Frame = 0
Query:   69 ENNLITAKGLTKIYEDFPQKCQYKGRGREAEFLRGLMVAYKEWGYQLYRALAFEDLASRTEKLGGKGRTREFLRELRDKERDRVLK 154
            E++L++A G  K++  FP +      GREA+ L  LM  YK+W + LY  L FED   RTE LG   + +  + ELR+KE+ + LK
Sbjct:   55 ESHLVSADGFKKVHRTFPYQVSTDVSGREAQALASLMKMYKQWAFDLYPGLNFEDFIERTESLGKGHQVQGLMTELREKEKVKALK 140          
BLAST of mRNA_H-paniculata_contig7893.15914.1 vs. uniprot
Match: M4BUG3_HYAAE (Swi3 domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BUG3_HYAAE)

HSP 1 Score: 70.5 bits (171), Expect = 1.260e-10
Identity = 38/105 (36.19%), Postives = 58/105 (55.24%), Query Frame = 0
Query:   59 SKRIKIPAFSENNLITAKGLTKIYEDFPQKCQYKGRGREAEFLRGLMVAYKEWGYQLYRALAFEDLASRTEKLGGKGRTREFLRELRDKERDRVLKVEVGKSAKD 163
            SK+ +     E++L++A+G  K+Y  FP +      GREA  L  L+  YK+W Y LY  L FED   RTE L    + +  + E+R+KER + ++   GK  +D
Sbjct:   44 SKKRRRNLLRESHLLSAEGFKKVYRTFPYQVSSTVSGREAPALASLIKMYKQWAYDLYPGLNFEDFVDRTETLAKGHQVQGLMAEMREKERRKRVERRCGKDEED 148          
BLAST of mRNA_H-paniculata_contig7893.15914.1 vs. uniprot
Match: A0A397E7Y0_9STRA (Swi3 domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397E7Y0_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 3.330e-10
Identity = 38/86 (44.19%), Postives = 49/86 (56.98%), Query Frame = 0
Query:   67 FSENNLITAKGLTKIYEDFPQKCQYK-GRGREAEFLRGLMVAYKEWGYQLYRALAFEDLASRTEKLGGKGRTREFLRELRDKERDR 151
            FSE +L+  +GL+ +Y  FP         G E E LR L+ AYKEW Y+LY  L FEDL  +TE L  K     F+ +LR +ER R
Sbjct:   56 FSEQHLLGPRGLSLVYSTFPTHFNRAVTHGNEGEALRELITAYKEWAYELYPGLNFEDLVDKTEALAKKAAVSSFIADLRQQERKR 141          
BLAST of mRNA_H-paniculata_contig7893.15914.1 vs. uniprot
Match: A0A397BHD7_9STRA (Swi3 domain-containing protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397BHD7_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 7.700e-10
Identity = 38/86 (44.19%), Postives = 49/86 (56.98%), Query Frame = 0
Query:   67 FSENNLITAKGLTKIYEDFPQKCQYK-GRGREAEFLRGLMVAYKEWGYQLYRALAFEDLASRTEKLGGKGRTREFLRELRDKERDR 151
            FSE +L+  +GL+ +Y  FP         G E E LR L+ AYKEW Y+LY  L FEDL  +TE L  K     F+ +LR +ER R
Sbjct:   56 FSEQHLLGPRGLSLVYSTFPTHFNRAVTHGNEGEALRELITAYKEWAYELYPGLNFEDLVDKTEALAKKAAVSSFIADLRQQERKR 141          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7893.15914.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKE8_ECTSI3.620e-6339.13Swi3 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5L0P4_9PHAE2.900e-6237.25Swi3 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A836CM34_9STRA2.330e-2054.72Swi3 domain-containing protein n=1 Tax=Tribonema m... [more]
A0A7S1TV66_9STRA5.840e-1341.58Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A0P1APB5_PLAHL5.800e-1240.00Timeless-interacting protein isoform x3 n=1 Tax=Pl... [more]
A0A484EHM7_BRELC1.020e-1037.62Swi3 domain-containing protein n=1 Tax=Bremia lact... [more]
A0A2P4YEG9_9STRA1.100e-1040.70Swi3 domain-containing protein n=1 Tax=Phytophthor... [more]
M4BUG3_HYAAE1.260e-1036.19Swi3 domain-containing protein n=1 Tax=Hyaloperono... [more]
A0A397E7Y0_9STRA3.330e-1044.19Swi3 domain-containing protein (Fragment) n=1 Tax=... [more]
A0A397BHD7_9STRA7.700e-1044.19Swi3 domain-containing protein n=5 Tax=Aphanomyces... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 242..262
NoneNo IPR availablePRODOMPD089639coord: 64..185
e-value: 4.0E-7
score: 134.0
IPR012923Chromosome segregation in meiosis protein 3PFAMPF07962Swi3coord: 68..148
e-value: 1.4E-16
score: 60.3
IPR040038TIPIN/Csm3/Swi3PANTHERPTHR13220TIMELESS INTERACTING-RELATEDcoord: 8..274

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7893contigH-paniculata_contig7893:1206..5132 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7893.15914.1mRNA_H-paniculata_contig7893.15914.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7893 722..5218 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7893.15914.1 ID=prot_H-paniculata_contig7893.15914.1|Name=mRNA_H-paniculata_contig7893.15914.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=565bp
MSGSDSDEGRPRPIGAEQESEDDESDREVNSNEDGAKSAAAEGAAAAGAA
APGEEKKASKRIKIPAFSENNLITAKGLTKIYEDFPQKCQYKGRGREAEF
LRGLMVAYKEWGYQLYRALAFEDLASRTEKLGGKGRTREFLRELRDKERD
RVLKVEVGKSAKDDVRAEEAANRADQVNSADGGDVEKQKDSEEVETRLAN
SRYMDVDEEGEGEREHPSDKGPGSRSKFAAAPVVGALSVEVRARMEANRR
LALERLRRKKEEAASALSTSSAGAIVGKSISATPLAADIIGKGVTEDDLM
HLDAEELNGEPQDNFEDDEAALAEMEAEEPATKKSKLSVDTATPATTLLE
SNISCSLDKTFAPKIFEVPSLAVDTLPGSTERSPVDGDGGATHGLSTAPT
DEATVSGRTGNGVVGKAVAPKPEGIDEGSTPTAHPAGSESSKRETTASKM
CIPATSGDQEIYKGDVKSAEALTEKAAKAAADGSNGRKDKGISSNTAAAF
GVMTGSVKNVGEILLAVSPQKCKATESEVPMSPLGRMLADTDIPAEGGSL
AVRVPIAGLSADKP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012923Csm3
IPR040038TIPIN/Csm3/Swi3