prot_H-paniculata_contig78799.15898.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig78799.15898.1
Unique Nameprot_H-paniculata_contig78799.15898.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length134
Homology
BLAST of mRNA_H-paniculata_contig78799.15898.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE)

HSP 1 Score: 143 bits (360), Expect = 6.060e-37
Identity = 66/126 (52.38%), Postives = 88/126 (69.84%), Query Frame = 0
Query:    4 QFVGAKAFCTLDLLQGYWQCPIAEDAQELFTIVTDRGLFTPTRVPQGVVNETAYFQEMMGTVLEGLVGRCCLVYVDDVVLWAEDEGELLRRLDLVLERLMAVGLFAAVHKAVFYTPTVHWCGMIYS 129
            Q   AK + +LDLLQ YWQCP+A +AQE+FTI T  GL+TP RVPQG++N T+YFQ  +  +L+GL    C V+VDDVV W  D+ +LL  LDL+L+RL   GL+ A HK  F+  ++ WCG +YS
Sbjct:  839 QLSAAKFYGSLDLLQWYWQCPLAPEAQEIFTIATPGGLYTPKRVPQGILNATSYFQATLTRILDGLN---CFVWVDDVVYWGMDKDDLLDTLDLILDRLEGAGLYVAAHKCTFFETSITWCGKVYS 961          
BLAST of mRNA_H-paniculata_contig78799.15898.1 vs. uniprot
Match: A0A6H5L028_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L028_9PHAE)

HSP 1 Score: 137 bits (345), Expect = 6.290e-35
Identity = 67/124 (54.03%), Postives = 83/124 (66.94%), Query Frame = 0
Query:    7 GAKAFCTLDLLQGYWQCPIAEDAQELFTIVTDRGLFTPTRVPQGVVNETAYFQEMMGTVLEGLVGRCCLVYVDDVVLWAEDEGELLRRLDLVLERLMAVGLFAAVHKAVFYTPTVHWCGMIYSG 130
            GA  F  LDLLQGYWQ P+AE A+E+F+I T  GLF PTRVPQ V+N T YFQ +M  +L+GL    C V+VDD + W  DE +LL  LD +L RL   G+FAA HK  F+   + WCG +YSG
Sbjct:  495 GATCFGKLDLLQGYWQMPLAESAREIFSIATPEGLFEPTRVPQDVLNATGYFQAVMTEILQGLN---CAVWVDDDIWWGIDETDLLNTLDEILWRLQDNGIFAAAHKCPFFDTKIRWCGKVYSG 615          
BLAST of mRNA_H-paniculata_contig78799.15898.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE)

HSP 1 Score: 134 bits (337), Expect = 7.580e-34
Identity = 63/127 (49.61%), Postives = 86/127 (67.72%), Query Frame = 0
Query:    3 QQFVGAKAFCTLDLLQGYWQCPIAEDAQELFTIVTDRGLFTPTRVPQGVVNETAYFQEMMGTVLEGLVGRCCLVYVDDVVLWAEDEGELLRRLDLVLERLMAVGLFAAVHKAVFYTPTVHWCGMIYS 129
            Q+   A  + +LD+LQGYW  P+A +AQE+FT++   GL++P RVPQGV+N T+Y+Q  M ++L  L    C+V+VDD+V W E E +LL  LDL+L R    GLF A HK  FYT +V WCG +YS
Sbjct:  740 QRLSRATCYGSLDMLQGYWGMPLAPEAQEIFTMIGPGGLYSPERVPQGVLNATSYYQGTMNSILHDLN---CIVWVDDIVYWGETEEDLLNTLDLILARFEHHGLFVAAHKCTFYTTSVKWCGKVYS 863          
BLAST of mRNA_H-paniculata_contig78799.15898.1 vs. uniprot
Match: A0A6G0SJ18_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0SJ18_9STRA)

HSP 1 Score: 117 bits (293), Expect = 1.090e-30
Identity = 58/128 (45.31%), Postives = 78/128 (60.94%), Query Frame = 0
Query:    7 GAKAFCTLDLLQGYWQCPIAEDAQELFTIVTDRGLFTPTRVPQGVVNETAYFQEMMGTVLEGLVGRCCLVYVDDVVLWAEDEGELLRRLDLVLERLMAVGLFAAVHKAVFYTPTVHWCGMIYSGTGVK 134
            GAK    LD  +GYWQ P+ ED+QELFT +T RG++TPTRVP G  +  AY Q ++  +  GL+G   L ++DD++ +AE + ELL  LD VL R  A GL     K  F+   V WCG + S  GV+
Sbjct:   31 GAKVVFALDWFRGYWQLPLHEDSQELFTFITHRGMYTPTRVPMGATDAVAYCQGVVEEIFGGLLGNGILAWLDDILGYAESDDELLPLLDQVLARCEAYGLKLHAKKCEFFEIEVMWCGKMVSAAGVR 158          
BLAST of mRNA_H-paniculata_contig78799.15898.1 vs. uniprot
Match: A0A6G0NWQ3_9STRA (Reverse transcriptase domain-containing protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0NWQ3_9STRA)

HSP 1 Score: 120 bits (300), Expect = 1.590e-30
Identity = 59/128 (46.09%), Postives = 78/128 (60.94%), Query Frame = 0
Query:    7 GAKAFCTLDLLQGYWQCPIAEDAQELFTIVTDRGLFTPTRVPQGVVNETAYFQEMMGTVLEGLVGRCCLVYVDDVVLWAEDEGELLRRLDLVLERLMAVGLFAAVHKAVFYTPTVHWCGMIYSGTGVK 134
            GAK    +D  +GYWQ P+ ED+QELFT +T RG++TPTRVP G  +  AY Q ++  +  GL+G   L ++DD+V +AE E ELL  LD VL R  A GL     K  F+   V WCG + S  GV+
Sbjct:  147 GAKVVFAMDWFRGYWQLPLHEDSQELFTFITHRGMYTPTRVPMGATDAVAYCQGVVEEIFGGLLGNGILAWLDDIVGYAESEDELLTMLDQVLARCEAYGLKLHAKKCEFFEIEVKWCGKMVSAAGVR 274          
BLAST of mRNA_H-paniculata_contig78799.15898.1 vs. uniprot
Match: H3H555_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H555_PHYRM)

HSP 1 Score: 120 bits (300), Expect = 7.070e-29
Identity = 57/128 (44.53%), Postives = 78/128 (60.94%), Query Frame = 0
Query:    7 GAKAFCTLDLLQGYWQCPIAEDAQELFTIVTDRGLFTPTRVPQGVVNETAYFQEMMGTVLEGLVGRCCLVYVDDVVLWAEDEGELLRRLDLVLERLMAVGLFAAVHKAVFYTPTVHWCGMIYSGTGVK 134
            GAK F  LD  +GYWQ P+  D+QE+++ VT RG++TPTRVP G  +  AY Q ++  +   L+G C L ++DD++ +AEDE  LL  LD VLER    GL     K  F+   V WCG + S  GV+
Sbjct:   31 GAKVFFVLDWFRGYWQLPLHPDSQEIYSFVTHRGIYTPTRVPMGATDAVAYCQGVVEEIFGDLLGTCILAWLDDILGYAEDEASLLEVLDKVLERCEKFGLKLHAKKCQFFATEVKWCGRMISAQGVR 158          
BLAST of mRNA_H-paniculata_contig78799.15898.1 vs. uniprot
Match: H3H4S7_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H4S7_PHYRM)

HSP 1 Score: 120 bits (300), Expect = 7.330e-29
Identity = 57/128 (44.53%), Postives = 78/128 (60.94%), Query Frame = 0
Query:    7 GAKAFCTLDLLQGYWQCPIAEDAQELFTIVTDRGLFTPTRVPQGVVNETAYFQEMMGTVLEGLVGRCCLVYVDDVVLWAEDEGELLRRLDLVLERLMAVGLFAAVHKAVFYTPTVHWCGMIYSGTGVK 134
            GAK F  LD  +GYWQ P+  D+QE+++ VT RG++TPTRVP G  +  AY Q ++  +   L+G C L ++DD++ +AEDE  LL  LD VLER    GL     K  F+   V WCG + S  GV+
Sbjct:  759 GAKVFFVLDWFRGYWQLPLHPDSQEIYSFVTHRGIYTPTRVPMGATDAVAYCQGVVEEIFGDLLGTCILAWLDDILGYAEDEASLLEVLDKVLERCEKFGLKLHAKKCQFFATEVKWCGRMISAQGVR 886          
BLAST of mRNA_H-paniculata_contig78799.15898.1 vs. uniprot
Match: A0A6A3YWA9_9STRA (Reverse transcriptase domain-containing protein n=4 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3YWA9_9STRA)

HSP 1 Score: 119 bits (299), Expect = 9.350e-29
Identity = 59/128 (46.09%), Postives = 78/128 (60.94%), Query Frame = 0
Query:    7 GAKAFCTLDLLQGYWQCPIAEDAQELFTIVTDRGLFTPTRVPQGVVNETAYFQEMMGTVLEGLVGRCCLVYVDDVVLWAEDEGELLRRLDLVLERLMAVGLFAAVHKAVFYTPTVHWCGMIYSGTGVK 134
            GAK    +D  +GYWQ P+ ED+QELFT +T RG++TPTRVP G  +  AY Q ++  +  GL+G   L ++DD+V +AE E ELL  LD VL R  A GL     K  F+   V WCG + S  GV+
Sbjct:  620 GAKVVFAMDWFRGYWQLPLHEDSQELFTFITHRGMYTPTRVPMGATDAVAYCQGVVEEIFGGLLGNGILAWLDDIVGYAESEDELLTLLDQVLARCEAYGLKLHAKKCEFFEIEVKWCGKMVSAAGVR 747          
BLAST of mRNA_H-paniculata_contig78799.15898.1 vs. uniprot
Match: H3H656_PHYRM (Reverse transcriptase domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H656_PHYRM)

HSP 1 Score: 119 bits (299), Expect = 9.650e-29
Identity = 57/128 (44.53%), Postives = 78/128 (60.94%), Query Frame = 0
Query:    7 GAKAFCTLDLLQGYWQCPIAEDAQELFTIVTDRGLFTPTRVPQGVVNETAYFQEMMGTVLEGLVGRCCLVYVDDVVLWAEDEGELLRRLDLVLERLMAVGLFAAVHKAVFYTPTVHWCGMIYSGTGVK 134
            GAK F  LD  +GYWQ P+  D+QE+++ VT RG++TPTRVP G  +  AY Q ++  +   L+G C L ++DD++ +AEDE  LL  LD VLER    GL     K  F+   V WCG + S  GV+
Sbjct:  757 GAKVFFVLDWFRGYWQLPLHPDSQEIYSFVTHRGIYTPTRVPMGATDAVAYCQGVVEEIFGDLLGTCILAWLDDILGYAEDEASLLEVLDKVLERCEKFGLKLHAKKCQFFATEVKWCGRMTSAQGVR 884          
BLAST of mRNA_H-paniculata_contig78799.15898.1 vs. uniprot
Match: A0A2P4WWJ1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WWJ1_9STRA)

HSP 1 Score: 119 bits (298), Expect = 1.320e-28
Identity = 59/128 (46.09%), Postives = 80/128 (62.50%), Query Frame = 0
Query:    7 GAKAFCTLDLLQGYWQCPIAEDAQELFTIVTDRGLFTPTRVPQGVVNETAYFQEMMGTVLEGLVGRCCLVYVDDVVLWAEDEGELLRRLDLVLERLMAVGLFAAVHKAVFYTPTVHWCGMIYSGTGVK 134
            GA+ F  LD  +GYWQ P+ ED+QELFT +T RG++TPTRVP G  +  AY Q ++  +   L+G   LV++DD++ +AE E ELL+ LD VL R  A GL     K  F+   V WCG + S  GV+
Sbjct:  541 GAQVFFALDWFRGYWQLPLHEDSQELFTFITHRGMYTPTRVPMGATDAVAYCQGVVEEIFGDLLGNGILVWLDDILGYAESEEELLQLLDQVLARCEAYGLKLHAKKCDFFEIEVKWCGKMVSAAGVR 668          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig78799.15898.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K5A5_9PHAE6.060e-3752.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L028_9PHAE6.290e-3554.03CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5L7F6_9PHAE7.580e-3449.61Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6G0SJ18_9STRA1.090e-3045.31Reverse transcriptase domain-containing protein n=... [more]
A0A6G0NWQ3_9STRA1.590e-3046.09Reverse transcriptase domain-containing protein n=... [more]
H3H555_PHYRM7.070e-2944.53Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
H3H4S7_PHYRM7.330e-2944.53Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A6A3YWA9_9STRA9.350e-2946.09Reverse transcriptase domain-containing protein n=... [more]
H3H656_PHYRM9.650e-2944.53Reverse transcriptase domain-containing protein n=... [more]
A0A2P4WWJ1_9STRA1.320e-2846.09Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 7..126
e-value: 1.4E-11
score: 44.4
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..128
score: 14.533
NoneNo IPR availableGENE3D3.30.70.270coord: 7..127
e-value: 7.0E-29
score: 102.7
NoneNo IPR availableGENE3D3.10.10.10coord: 24..51
e-value: 7.0E-29
score: 102.7
NoneNo IPR availablePANTHERPTHR24559:SF222coord: 4..134
NoneNo IPR availablePANTHERPTHR24559FAMILY NOT NAMEDcoord: 4..134
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 6..133

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig78799contigH-paniculata_contig78799:158..559 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig78799.15898.1mRNA_H-paniculata_contig78799.15898.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig78799 158..559 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig78799.15898.1 ID=prot_H-paniculata_contig78799.15898.1|Name=mRNA_H-paniculata_contig78799.15898.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=134bp
MAQQFVGAKAFCTLDLLQGYWQCPIAEDAQELFTIVTDRGLFTPTRVPQG
VVNETAYFQEMMGTVLEGLVGRCCLVYVDDVVLWAEDEGELLRRLDLVLE
RLMAVGLFAAVHKAVFYTPTVHWCGMIYSGTGVK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom