prot_H-paniculata_contig78704.15893.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig78704.15893.1
Unique Nameprot_H-paniculata_contig78704.15893.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length145
Homology
BLAST of mRNA_H-paniculata_contig78704.15893.1 vs. uniprot
Match: A0A6B7EV91_9PHAE (Putative RuBisCO transcriptional regulator n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EV91_9PHAE)

HSP 1 Score: 254 bits (648), Expect = 1.790e-82
Identity = 130/153 (84.97%), Postives = 136/153 (88.89%), Query Frame = 0
Query:    1 MKYFPFSLKQLKLLQAIK--------IASKNFYLSQPPLSSQIKIFEHNLYSKILVRKKNQIYFTPEGELVLDYANKILKLCKEADNAIAFFKKLKRIRLKIGSNKIIGQKISFKLINLFCKRYPYAHVQLQIGCTKSISWDLINGKIDIGIV 145
            MKYFPFSLKQLK+LQAIK        IASKN YLSQP LSS+IKIF+HN YSKILVRKKNQIYFT EGELVLDYANKILKLCKEADNAIAFFKKLKR RLKIGSNK IG+ I  KLINLFCKRYPYAHVQLQIGCTKS+SWDL+NGKIDIGIV
Sbjct:    1 MKYFPFSLKQLKVLQAIKNEGNINIKIASKNLYLSQPTLSSKIKIFQHNPYSKILVRKKNQIYFTSEGELVLDYANKILKLCKEADNAIAFFKKLKRFRLKIGSNKTIGKNILLKLINLFCKRYPYAHVQLQIGCTKSLSWDLVNGKIDIGIV 153          
BLAST of mRNA_H-paniculata_contig78704.15893.1 vs. uniprot
Match: A0A6B7IJB9_9PHAE (Probable RuBisCO transcriptional regulator n=4 Tax=Scytosiphon TaxID=27966 RepID=A0A6B7IJB9_9PHAE)

HSP 1 Score: 190 bits (483), Expect = 1.560e-57
Identity = 97/151 (64.24%), Postives = 117/151 (77.48%), Query Frame = 0
Query:    1 MKYFPFSLKQLKLLQAIK------IASKNFYLSQPPLSSQIKIFEHNLYSKILVRKKNQIYFTPEGELVLDYANKILKLCKEADNAIAFFKKLKRIRLKIGSNKIIGQKISFKLINLFCKRYPYAHVQLQIGCTKSISWDLINGKIDIGIV 145
            MK F F+L+QLK+LQ +K       A+K  YLSQP LS QIK  E NLYSKIL RKK QIYFTPEGEL+LDYAN IL+LC+E D A+ + KK +R  L++GS+KIIG+ IS KLI+LF KRYPY  VQL+I  T+SISWD++NGKIDIGIV
Sbjct:    1 MKNFSFNLEQLKILQTLKNEGNLTTAAKILYLSQPALSLQIKSLEKNLYSKILRRKKKQIYFTPEGELILDYANNILQLCEEVDRAVLYLKKFRRFSLRVGSDKIIGESISLKLIDLFSKRYPYVVVQLKISSTQSISWDIVNGKIDIGIV 151          
BLAST of mRNA_H-paniculata_contig78704.15893.1 vs. uniprot
Match: A0A5A4MHG3_9PHAE (Probable RuBisCO transcriptional regulator n=1 Tax=Hapterophycus canaliculatus TaxID=2567908 RepID=A0A5A4MHG3_9PHAE)

HSP 1 Score: 189 bits (480), Expect = 4.410e-57
Identity = 95/151 (62.91%), Postives = 117/151 (77.48%), Query Frame = 0
Query:    1 MKYFPFSLKQLKLLQAIK------IASKNFYLSQPPLSSQIKIFEHNLYSKILVRKKNQIYFTPEGELVLDYANKILKLCKEADNAIAFFKKLKRIRLKIGSNKIIGQKISFKLINLFCKRYPYAHVQLQIGCTKSISWDLINGKIDIGIV 145
            MK F F+L+QLK++QA+K        +K  YLSQP LS QIK  E NLYSKIL+RKK QIYFTPEGEL+LDYANKIL+LC+E D A+   K  K+  L++GS+K IG+ IS KLI+LF KRYPY HVQL+I  T++ISW++INGKIDIGIV
Sbjct:    1 MKNFSFNLEQLKIIQAVKNEGNLKTVAKFLYLSQPALSLQIKNLEENLYSKILIRKKKQIYFTPEGELILDYANKILELCEEVDKAVLCLKNFKKFSLRVGSDKSIGEYISIKLIDLFSKRYPYTHVQLKISSTQNISWEIINGKIDIGIV 151          
BLAST of mRNA_H-paniculata_contig78704.15893.1 vs. uniprot
Match: D1J7C3_ECTSI (Probable RuBisCO transcriptional regulator n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D1J7C3_ECTSI)

HSP 1 Score: 182 bits (462), Expect = 1.980e-54
Identity = 86/151 (56.95%), Postives = 121/151 (80.13%), Query Frame = 0
Query:    1 MKYFPFSLKQLKLLQAIK------IASKNFYLSQPPLSSQIKIFEHNLYSKILVRKKNQIYFTPEGELVLDYANKILKLCKEADNAIAFFKKLKRIRLKIGSNKIIGQKISFKLINLFCKRYPYAHVQLQIGCTKSISWDLINGKIDIGIV 145
            MK F F+L+QLK++Q IK      I +K+  LSQP +S Q+K  + ++YSKIL+RKKN+IYFTPEGELVLDYANK+L+LC+EAD AI + K +K+  L IGSNK++G+ +S K+I +FC+RY Y+HV+L+I C KS+SW++ING++DIGI+
Sbjct:    1 MKDFSFTLRQLKVIQTIKTEGNVKITAKHLKLSQPAVSLQLKQLQQDIYSKILIRKKNEIYFTPEGELVLDYANKVLRLCEEADKAILYLKTIKKFTLIIGSNKMLGKYLSSKIIEIFCRRYSYSHVKLKICCDKSLSWNIINGRVDIGIL 151          
BLAST of mRNA_H-paniculata_contig78704.15893.1 vs. uniprot
Match: A0A8F0F9M1_9PHAE (Probable RuBisCO transcriptional regulator n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0F9M1_9PHAE)

HSP 1 Score: 178 bits (452), Expect = 6.870e-53
Identity = 94/151 (62.25%), Postives = 112/151 (74.17%), Query Frame = 0
Query:    1 MKYFPFSLKQLKLLQAIKI------ASKNFYLSQPPLSSQIKIFEHNLYSKILVRKKNQIYFTPEGELVLDYANKILKLCKEADNAIAFFKKLKRIRLKIGSNKIIGQKISFKLINLFCKRYPYAHVQLQIGCTKSISWDLINGKIDIGIV 145
            MKY PFSL+QL+ +Q IK       A+K  YLSQP LS QIK  E  + S IL RKK +IYFT  GEL+LDYA+KIL LC+EAD AI +FK LKRI L IGSN  IG+ I  K+INLFCKRY YAH++L+I  T +I+WD+INGKIDIGIV
Sbjct:    1 MKYLPFSLEQLRTIQTIKNEGTVKQAAKKLYLSQPALSLQIKKLESGIKSPILDRKKRKIYFTRTGELILDYADKILNLCEEADKAILYFKNLKRISLNIGSNYTIGKYILPKIINLFCKRYSYAHIKLEISDTNTIAWDIINGKIDIGIV 151          
BLAST of mRNA_H-paniculata_contig78704.15893.1 vs. uniprot
Match: A0A0R6LUS1_UNDPI (Probable RuBisCO transcriptional regulator n=29 Tax=Laminariales TaxID=2886 RepID=A0A0R6LUS1_UNDPI)

HSP 1 Score: 177 bits (448), Expect = 2.900e-52
Identity = 90/151 (59.60%), Postives = 116/151 (76.82%), Query Frame = 0
Query:    1 MKYFPFSLKQLKLLQAIKI------ASKNFYLSQPPLSSQIKIFEHNLYSKILVRKKNQIYFTPEGELVLDYANKILKLCKEADNAIAFFKKLKRIRLKIGSNKIIGQKISFKLINLFCKRYPYAHVQLQIGCTKSISWDLINGKIDIGIV 145
            MKYFPFSL+QL+++QAIK       A+K  YLSQP LS QI+  E+ + S IL R+K QIYFT  GEL+LDYA++IL+LC+EAD AI + KKLKRI L IGSN+I+G  I  K+I+LFC+RY Y HV+L+I  T  ISW+++NGK+DIGIV
Sbjct:    1 MKYFPFSLEQLRIIQAIKNEATIKQAAKRLYLSQPALSLQIQKLEYEIDSPILDRRKKQIYFTFTGELILDYADRILRLCEEADKAIVYLKKLKRISLTIGSNEIVGTYILPKIIDLFCRRYSYIHVKLEIDSTNCISWNIVNGKVDIGIV 151          
BLAST of mRNA_H-paniculata_contig78704.15893.1 vs. uniprot
Match: A0A1I9LVC7_9PHAE (Probable RuBisCO transcriptional regulator n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVC7_9PHAE)

HSP 1 Score: 173 bits (439), Expect = 6.360e-51
Identity = 88/151 (58.28%), Postives = 110/151 (72.85%), Query Frame = 0
Query:    1 MKYFPFSLKQLKLLQAIK------IASKNFYLSQPPLSSQIKIFEHNLYSKILVRKKNQIYFTPEGELVLDYANKILKLCKEADNAIAFFKKLKRIRLKIGSNKIIGQKISFKLINLFCKRYPYAHVQLQIGCTKSISWDLINGKIDIGIV 145
            M+   F+LKQLK++Q IK      + +K  YLSQ  L +QIK  E N YSKIL+RKKNQ+Y T EGEL+LDYA KIL LC E D AI + KK+K+  LKIGS K IG+  S KLI+LFCKRY Y ++QLQI  T+ ISWD++NG+ID+GIV
Sbjct:    1 MEDLSFNLKQLKIIQRIKTEVNINLTAKKLYLSQSSLIAQIKNLEQNTYSKILIRKKNQLYLTNEGELILDYAKKILALCTETDKAILYLKKIKKFSLKIGSTKTIGKSFSLKLIDLFCKRYYYTNIQLQIYFTEKISWDILNGRIDMGIV 151          
BLAST of mRNA_H-paniculata_contig78704.15893.1 vs. uniprot
Match: A0A8F0F6V8_AKKLU (Probable RuBisCO transcriptional regulator n=1 Tax=Akkesiphycus lubricus TaxID=3022 RepID=A0A8F0F6V8_AKKLU)

HSP 1 Score: 172 bits (437), Expect = 1.300e-50
Identity = 87/151 (57.62%), Postives = 112/151 (74.17%), Query Frame = 0
Query:    1 MKYFPFSLKQLKLLQAIKI------ASKNFYLSQPPLSSQIKIFEHNLYSKILVRKKNQIYFTPEGELVLDYANKILKLCKEADNAIAFFKKLKRIRLKIGSNKIIGQKISFKLINLFCKRYPYAHVQLQIGCTKSISWDLINGKIDIGIV 145
            MKYFPF+L+QL+++QAIK       A+   YLSQP LS QI+  E+ + S IL R K QIY T  GEL+LDYA++IL LC+EAD AI + KKLKRI L IG+N+ +G  I  K+INLFCKRYPY  ++L+I CT  ISW+++NGKID+GIV
Sbjct:    1 MKYFPFNLEQLRIIQAIKTEATIKQAATKLYLSQPALSLQIQKLEYEIDSPILDRNKKQIYLTLTGELLLDYADRILSLCEEADKAIIYLKKLKRISLTIGTNETVGTYILPKIINLFCKRYPYTRIKLEIHCTNCISWNIVNGKIDLGIV 151          
BLAST of mRNA_H-paniculata_contig78704.15893.1 vs. uniprot
Match: A0A8F0F7X1_9PHAE (Probable RuBisCO transcriptional regulator n=1 Tax=Pseudochorda nagaii TaxID=74379 RepID=A0A8F0F7X1_9PHAE)

HSP 1 Score: 171 bits (433), Expect = 5.210e-50
Identity = 86/151 (56.95%), Postives = 111/151 (73.51%), Query Frame = 0
Query:    1 MKYFPFSLKQLKLLQA------IKIASKNFYLSQPPLSSQIKIFEHNLYSKILVRKKNQIYFTPEGELVLDYANKILKLCKEADNAIAFFKKLKRIRLKIGSNKIIGQKISFKLINLFCKRYPYAHVQLQIGCTKSISWDLINGKIDIGIV 145
            MKYFPFSL+QL+++QA      IK A+K  YLSQP LS QI+  E+ + S IL R K QIY T  GEL+LDYA++IL LC+EAD AI + KKLKR+ L IG+N+ +G  I  K+INLFC RYPY  ++L+I C   ISW+++NGKID+GIV
Sbjct:    1 MKYFPFSLEQLRIVQAVKNEATIKQAAKKLYLSQPALSLQIQKLEYEIDSPILDRNKKQIYLTLTGELLLDYADRILNLCEEADKAIIYLKKLKRVSLTIGTNETVGTYILPKIINLFCTRYPYTRIKLEINCANCISWNIVNGKIDLGIV 151          
BLAST of mRNA_H-paniculata_contig78704.15893.1 vs. uniprot
Match: A0A344PFD9_9PHAE (Probable RuBisCO transcriptional regulator n=1 Tax=Endarachne binghamiae TaxID=698476 RepID=A0A344PFD9_9PHAE)

HSP 1 Score: 163 bits (412), Expect = 7.580e-47
Identity = 83/151 (54.97%), Postives = 111/151 (73.51%), Query Frame = 0
Query:    1 MKYFPFSLKQLKLLQAIK------IASKNFYLSQPPLSSQIKIFEHNLYSKILVRKKNQIYFTPEGELVLDYANKILKLCKEADNAIAFFKKLKRIRLKIGSNKIIGQKISFKLINLFCKRYPYAHVQLQIGCTKSISWDLINGKIDIGIV 145
            MK F F+L+QLK++Q +K       A+K  YLSQP LS QIK  E NL +KIL+RK  ++YFT EGEL+L+YA KILKLC+E D+AI   KK K+  L+IGS+K IG+ I  KLI+LF KRY Y  ++L+I  T+++SW ++NGK+DIGIV
Sbjct:    1 MKKFSFTLEQLKIIQTLKNQGNLTTAAKFLYLSQPALSLQIKTLEKNLDAKILIRKNKELYFTSEGELILNYALKILKLCEEVDSAILRLKKFKKFSLRIGSDKSIGESILLKLIDLFSKRYSYVLIELKISSTQNVSWGIVNGKLDIGIV 151          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig78704.15893.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6B7EV91_9PHAE1.790e-8284.97Putative RuBisCO transcriptional regulator n=1 Tax... [more]
A0A6B7IJB9_9PHAE1.560e-5764.24Probable RuBisCO transcriptional regulator n=4 Tax... [more]
A0A5A4MHG3_9PHAE4.410e-5762.91Probable RuBisCO transcriptional regulator n=1 Tax... [more]
D1J7C3_ECTSI1.980e-5456.95Probable RuBisCO transcriptional regulator n=2 Tax... [more]
A0A8F0F9M1_9PHAE6.870e-5362.25Probable RuBisCO transcriptional regulator n=1 Tax... [more]
A0A0R6LUS1_UNDPI2.900e-5259.60Probable RuBisCO transcriptional regulator n=29 Ta... [more]
A0A1I9LVC7_9PHAE6.360e-5158.28Probable RuBisCO transcriptional regulator n=1 Tax... [more]
A0A8F0F6V8_AKKLU1.300e-5057.62Probable RuBisCO transcriptional regulator n=1 Tax... [more]
A0A8F0F7X1_9PHAE5.210e-5056.95Probable RuBisCO transcriptional regulator n=1 Tax... [more]
A0A344PFD9_9PHAE7.580e-4754.97Probable RuBisCO transcriptional regulator n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.190.290coord: 92..145
e-value: 9.6E-6
score: 27.1
NoneNo IPR availablePANTHERPTHR30126UNCHARACTERIZED HTH-TYPE TRANSCRIPTIONAL REGULATOR YEIE-RELATEDcoord: 15..145
NoneNo IPR availablePANTHERPTHR30126:SF39coord: 15..145
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 7..91
e-value: 3.5E-12
score: 47.9
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 15..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig78704contigH-paniculata_contig78704:6..440 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig78704.15893.1mRNA_H-paniculata_contig78704.15893.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig78704 6..440 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig78704.15893.1 ID=prot_H-paniculata_contig78704.15893.1|Name=mRNA_H-paniculata_contig78704.15893.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=145bp
MKYFPFSLKQLKLLQAIKIASKNFYLSQPPLSSQIKIFEHNLYSKILVRK
KNQIYFTPEGELVLDYANKILKLCKEADNAIAFFKKLKRIRLKIGSNKII
GQKISFKLINLFCKRYPYAHVQLQIGCTKSISWDLINGKIDIGIV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036388WH-like_DNA-bd_sf
IPR036390WH_DNA-bd_sf