prot_H-paniculata_contig7866.15886.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7866.15886.1
Unique Nameprot_H-paniculata_contig7866.15886.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length185
Homology
BLAST of mRNA_H-paniculata_contig7866.15886.1 vs. uniprot
Match: K0R3K3_THAOC (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R3K3_THAOC)

HSP 1 Score: 67.8 bits (164), Expect = 6.310e-10
Identity = 33/54 (61.11%), Postives = 39/54 (72.22%), Query Frame = 0
Query:   29 LCSVIVHSGSGVSSGHYFSYVRTAADEWLLMNDRVVTKVDLNEVLKVQAYILVY 82
            L +V+VH G     GHYF+YVR   D W L ND VVTKVD++EVLK QAY+LVY
Sbjct:  486 LVAVLVHRGRSCDRGHYFAYVRKGKD-WYLCNDSVVTKVDVSEVLKSQAYVLVY 538          
BLAST of mRNA_H-paniculata_contig7866.15886.1 vs. uniprot
Match: A0A8J1JL48_XENTR (ubiquitin carboxyl-terminal hydrolase 17-like protein D n=1 Tax=Xenopus tropicalis TaxID=8364 RepID=A0A8J1JL48_XENTR)

HSP 1 Score: 64.3 bits (155), Expect = 1.080e-9
Identity = 28/58 (48.28%), Postives = 41/58 (70.69%), Query Frame = 0
Query:   29 LCSVIVHSGSGVSSGHYFSYVRTAADEWLLMNDRVVTKVDLNEVLKVQAYILVYCRDH 86
            L +V+VH+G+  +SGHY+ YV+    +W  MND  VT VD+N VLK++AY+L Y R +
Sbjct:   60 LYAVLVHAGNTCNSGHYYCYVQAPNSKWYKMNDDCVTPVDINTVLKLEAYLLFYIRSN 117          
BLAST of mRNA_H-paniculata_contig7866.15886.1 vs. uniprot
Match: B5YMR5_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YMR5_THAPS)

HSP 1 Score: 67.0 bits (162), Expect = 1.230e-9
Identity = 33/60 (55.00%), Postives = 41/60 (68.33%), Query Frame = 0
Query:   31 SVIVHSGSGVSSGHYFSYVRTAADEWLLMNDRVVTKVDLNEVLKVQAYILVYCRDHAREK 90
            +V+VH G     GHYF+YVR   D W L ND VVTKVD++EVL  QAY+LVY  +  +EK
Sbjct:  456 AVLVHRGRSCDCGHYFAYVRKGQD-WYLANDAVVTKVDVDEVLSAQAYVLVYEVEGMKEK 514          
BLAST of mRNA_H-paniculata_contig7866.15886.1 vs. uniprot
Match: F7CHL5_XENTR (USP domain-containing protein n=2 Tax=Xenopus tropicalis TaxID=8364 RepID=F7CHL5_XENTR)

HSP 1 Score: 63.9 bits (154), Expect = 9.500e-9
Identity = 28/56 (50.00%), Postives = 40/56 (71.43%), Query Frame = 0
Query:   29 LCSVIVHSGSGVSSGHYFSYVRTAADEWLLMNDRVVTKVDLNEVLKVQAYILVYCR 84
            L +V+VH+G+  +SGHY+ YV+    +W  MND  VT VD+N VLK++AY+L Y R
Sbjct:  273 LYAVLVHAGNTCNSGHYYCYVQAPNSKWYKMNDDCVTPVDINTVLKLEAYLLFYIR 328          
BLAST of mRNA_H-paniculata_contig7866.15886.1 vs. uniprot
Match: A0A6I8T1J7_XENTR (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Xenopus tropicalis TaxID=8364 RepID=A0A6I8T1J7_XENTR)

HSP 1 Score: 63.9 bits (154), Expect = 1.080e-8
Identity = 28/56 (50.00%), Postives = 40/56 (71.43%), Query Frame = 0
Query:   29 LCSVIVHSGSGVSSGHYFSYVRTAADEWLLMNDRVVTKVDLNEVLKVQAYILVYCR 84
            L +V+VH+G+  +SGHY+ YV+    +W  MND  VT VD+N VLK++AY+L Y R
Sbjct:  258 LYAVLVHAGNTCNSGHYYCYVQAPNSKWYKMNDDCVTPVDINTVLKLEAYLLFYIR 313          
BLAST of mRNA_H-paniculata_contig7866.15886.1 vs. uniprot
Match: A0A8B9N664_9AVES (USP domain-containing protein n=1 Tax=Accipiter nisus TaxID=211598 RepID=A0A8B9N664_9AVES)

HSP 1 Score: 62.0 bits (149), Expect = 4.930e-8
Identity = 29/61 (47.54%), Postives = 39/61 (63.93%), Query Frame = 0
Query:   28 ALCSVIVHSGSGVSSGHYFSYVRTAADEWLLMNDRVVTKVDLNEVLKVQAYILVYCRDHAR 88
            +L +V+VHSG+G  SGHYF Y + +   W  MND  V   D++ VL+ QAY+L Y RD  R
Sbjct:  253 SLYAVLVHSGNGCHSGHYFCYTKASNGLWYEMNDSSVEDCDISTVLQQQAYLLFYVRDFLR 313          
BLAST of mRNA_H-paniculata_contig7866.15886.1 vs. uniprot
Match: A0A072U6X5_MEDTR (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Medicago truncatula TaxID=3880 RepID=A0A072U6X5_MEDTR)

HSP 1 Score: 61.2 bits (147), Expect = 1.100e-7
Identity = 29/56 (51.79%), Postives = 38/56 (67.86%), Query Frame = 0
Query:   29 LCSVIVHSGSGVSSGHYFSYVRTAADEWLLMNDRVVTKVDLNEVLKVQAYILVYCR 84
            L +V+VH+G   +SGHYFS+VRTA D W  ++D +VT V    VL  +AYIL Y R
Sbjct:  370 LYAVVVHTGFSSTSGHYFSFVRTAPDTWHKLDDSMVTMVSEETVLSQEAYILFYAR 425          
BLAST of mRNA_H-paniculata_contig7866.15886.1 vs. uniprot
Match: UPI00053CB491 (ubiquitin carboxyl-terminal hydrolase 42-like n=1 Tax=Haliaeetus leucocephalus TaxID=52644 RepID=UPI00053CB491)

HSP 1 Score: 60.5 bits (145), Expect = 1.610e-7
Identity = 27/62 (43.55%), Postives = 41/62 (66.13%), Query Frame = 0
Query:   28 ALCSVIVHSGSGVSSGHYFSYVRTAADEWLLMNDRVVTKVDLNEVLKVQAYILVYCRDHARE 89
            +L +V+VHSG+G  SGHYF Y + +   W  MND  V   D++ VL+ QAY+L Y R+ +++
Sbjct:  283 SLYAVLVHSGNGCHSGHYFCYTKASNGLWYEMNDSSVDPCDISTVLQQQAYLLFYVRNRSKK 344          
BLAST of mRNA_H-paniculata_contig7866.15886.1 vs. uniprot
Match: A0A8H7S4K0_9FUNG (USP domain-containing protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7S4K0_9FUNG)

HSP 1 Score: 60.5 bits (145), Expect = 1.980e-7
Identity = 27/57 (47.37%), Postives = 37/57 (64.91%), Query Frame = 0
Query:   29 LCSVIVHSGSGVSSGHYFSYVRTAADEWLLMNDRVVTKVDLNEVLKVQAYILVYCRD 85
            L  V+VH G   +SGHY+SYV+ +  +W  M+D +V K  L EVL  QAYIL Y ++
Sbjct:  370 LYGVLVHLGHSCNSGHYYSYVKNSDGQWYQMDDEMVEKASLKEVLSQQAYILFYAQE 426          
BLAST of mRNA_H-paniculata_contig7866.15886.1 vs. uniprot
Match: M1BII9_SOLTU (Ubiquitin carboxyl-terminal hydrolase n=3 Tax=Solanum tuberosum TaxID=4113 RepID=M1BII9_SOLTU)

HSP 1 Score: 59.7 bits (143), Expect = 3.530e-7
Identity = 27/56 (48.21%), Postives = 38/56 (67.86%), Query Frame = 0
Query:   29 LCSVIVHSGSGVSSGHYFSYVRTAADEWLLMNDRVVTKVDLNEVLKVQAYILVYCR 84
            L ++IVHSG  +SSGHY+S++R A +EW   ND  V  V+ + VL  +AYI+ Y R
Sbjct:  363 LYAIIVHSGPSISSGHYYSFIRCAPNEWYKFNDEQVVFVEEDFVLAQEAYIVFYAR 418          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7866.15886.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
K0R3K3_THAOC6.310e-1061.11Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Thal... [more]
A0A8J1JL48_XENTR1.080e-948.28ubiquitin carboxyl-terminal hydrolase 17-like prot... [more]
B5YMR5_THAPS1.230e-955.00Predicted protein n=1 Tax=Thalassiosira pseudonana... [more]
F7CHL5_XENTR9.500e-950.00USP domain-containing protein n=2 Tax=Xenopus trop... [more]
A0A6I8T1J7_XENTR1.080e-850.00Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Xeno... [more]
A0A8B9N664_9AVES4.930e-847.54USP domain-containing protein n=1 Tax=Accipiter ni... [more]
A0A072U6X5_MEDTR1.100e-751.79Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Medi... [more]
UPI00053CB4911.610e-743.55ubiquitin carboxyl-terminal hydrolase 42-like n=1 ... [more]
A0A8H7S4K0_9FUNG1.980e-747.37USP domain-containing protein n=1 Tax=Mucor circin... [more]
M1BII9_SOLTU3.530e-748.21Ubiquitin carboxyl-terminal hydrolase n=3 Tax=Sola... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 125..145
NoneNo IPR availableGENE3D3.90.70.10coord: 25..94
e-value: 4.5E-18
score: 67.2
NoneNo IPR availablePANTHERPTHR24006:SF727UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 42coord: 28..86
NoneNo IPR availablePANTHERPTHR24006FAMILY NOT NAMEDcoord: 28..86
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolasePFAMPF00443UCHcoord: 28..82
e-value: 4.0E-12
score: 46.2
IPR028889Ubiquitin specific protease domainPROSITEPS50235USP_3coord: 1..85
score: 15.384
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 29..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7866contigH-paniculata_contig7866:2477..5787 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7866.15886.1mRNA_H-paniculata_contig7866.15886.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7866 2435..5817 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7866.15886.1 ID=prot_H-paniculata_contig7866.15886.1|Name=mRNA_H-paniculata_contig7866.15886.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=185bp
MTYKFSVLCADARKKVPLTVIRVFVSCALCSVIVHSGSGVSSGHYFSYVR
TAADEWLLMNDRVVTKVDLNEVLKVQAYILVYCRDHAREKRIRDLKDRSA
FAIQKTWARSCFRAKIAARALARGAAKAIAARRRLREAAEEARLRTADID
ERSGQKQEAVKLGMALAFQGWWRRLGAMQRLAVG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001394Peptidase_C19_UCH
IPR028889USP_dom
IPR038765Papain-like_cys_pep_sf