prot_H-paniculata_contig7865.15885.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7865.15885.1
Unique Nameprot_H-paniculata_contig7865.15885.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length404
Homology
BLAST of mRNA_H-paniculata_contig7865.15885.1 vs. uniprot
Match: A0A6H5KW93_9PHAE (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW93_9PHAE)

HSP 1 Score: 169 bits (428), Expect = 2.910e-42
Identity = 189/482 (39.21%), Postives = 228/482 (47.30%), Query Frame = 0
Query:    1 MPESMQLVARLNAEAGGKLSVFDRLASTTTESRRQKVNDRDQLQENLRRKARQDAIRKKKDFKILP--LPGSSNGQPPAVGLGSTGSSISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGHDGGRSNATTSLRDSRPGTGRGGVEETTAPTWAAGGGLSQHRG-AVEPIKELSVFERLQAPSTRR---SSGD-----------------------------------------HVTPTRSTFSKNIPSKKPRSPSS---QNQKQAPPNHSKAGGVAHKKYMNNINKMGPGNATLAARL--QAEAELSRVPNTHS----SSGSGSPPRAIAAQSGADDSSASGNSLNSNSKDGN-GSAEGLDVVEEVSEGTGIERRRERRPVGARGDRDG--ATHGRG--GHVTGTSG---------------GASGNNVFDRLRNKLTESEQ-RRQAEAMAA-----------SGRHPFNSRRASQDKEAV 394
            MPESMQLVAR+NAEAGGK+SVFDRLASTTTESRRQKVNDRDQL ENLRRKA+QDA RKKKDFK++P  LPG+ NG P    +G+ G                                     GG S+   S+ D+        +E   + T+   GG+    G A    KELSVFERLQ    RR   SSGD                                          +TP+  + S     K  +SPS       +QAP NH+K  G  HKKY+    K+G G  T+A+RL  Q  AE             SS SGSPPRA++A         SG+   S+ KD +  S + L VV+E   G G  R RE++  G    RD   A H  G  G  TG SG               GA  N+VFDRL    TESE+ RRQ EA  A           +GR PF+ RR+SQDKEAV
Sbjct: 1602 MPESMQLVARVNAEAGGKVSVFDRLASTTTESRRQKVNDRDQLHENLRRKAKQDAFRKKKDFKVVPGHLPGA-NGLPTGT-MGAPGG------------------------------------GGSSSGHVSVADAIAS-----LEGGKSATYPGAGGIDGSSGSAATGPKELSVFERLQNSYIRRRSSSSGDPHSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMTPSSGSVSVAPHRKTAKSPSPAFYSPVRQAPANHAKLSGGTHKKYV----KVG-GPTTVASRLFMQQHAEXXXXXXXXXXXXXSSNSGSPPRAMSAT--------SGSQAGSDEKDRSVNSDDALGVVDEEGLGLGGRRDREKKQFGTSIHRDSGAAAHATGQRGSYTGASGSGXXXXXXXXXXXAAGAGDNSVFDRLPYSYTESERKRRQPEAAPAPPAIPASSNPSTGRQPFSIRRSSQDKEAV 2027          
BLAST of mRNA_H-paniculata_contig7865.15885.1 vs. uniprot
Match: D8LNZ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNZ6_ECTSI)

HSP 1 Score: 149 bits (375), Expect = 2.040e-35
Identity = 175/464 (37.72%), Postives = 211/464 (45.47%), Query Frame = 0
Query:    1 MPESMQLVARLNAEAGGKLSVFDRLASTTTESRRQKVNDRDQLQENLRRKARQDAIRKKKDFKILP--LPGSSNGQPPAV--GLGSTGSSISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGHDGGRSNA-----------TTSLRD----SRPGTGRGGVEETTAPTWAAG-------------------GGLSQHRG-AVEPIKELSVFERLQAPSTRRSSGDHVTPTRSTFSKNIPSKKPRSPSSQNQKQAPPNHSKAGGVAHKKYMNNINKMGPGNATLAAR--LQAEAELSRVPNTH----SSSGSGSPPRAIAAQSGADDSSASGNSLNSNSKDGN-GSAEGLDVVEEVSEGTGIERRRERRPVGARGDRDGATHGRG--GHVTGTSGGA--------------SGNNVFDRLRNKLTESEQ-RRQAEAMAASGRHPFNSRRASQDKEAVPNGGGSS 401
            MPESMQLVAR+NAEAGGK+SVFDRLASTTTESRRQKVNDRDQL ENLRRKA+QDA RKKKDFK++P  LPG+ NG P     G G  GSS                                  +GGRS             +  LRD    + P TGR  +EE                            GG+    G A    KELSVFERLQAP+                                      NH+K  G  HKKY+    K+G G  T+A+R  +Q  AE            +SS SGSPPRA++A         SG+   S+ KD +  S E L VV+E + G G  R RE++ +G R D     H  G  G  TG SG                  N+VF+RL    TESE+ RRQ EA  A    P +S  ++   E + NGGG S
Sbjct:  535 MPESMQLVARVNAEAGGKVSVFDRLASTTTESRRQKVNDRDQLHENLRRKAKQDAFRKKKDFKVVPGHLPGA-NGLPTGTTGGPGGGGSSSGHVSVADAIASL---------------------EGGRSATYPASSESSRLLSNYLRDGTGNAAPTTGRWSIEEGXXXXXXXXXXXXXXXXXXXXXXXXXXRGGIDGSSGSAATGPKELSVFERLQAPA--------------------------------------NHAKLSGGTHKKYV----KVG-GPTTVASRSFMQQHAEAXXXXXXXXXXXASSNSGSPPRAMSAT--------SGSQAGSDEKDRSVNSDEALGVVDEEALGLGGRRDREKKQLGTR-DSGATAHAAGQRGSYTGASGXXXXXXXXXXXXXXXXGDNSVFNRLPYSYTESERKRRQPEAAPAPPAIPASSNPSTSSVE-LENGGGRS 923          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7865.15885.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KW93_9PHAE2.910e-4239.21Kinesin motor domain-containing protein n=1 Tax=Ec... [more]
D8LNZ6_ECTSI2.040e-3537.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 33..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7865contigH-paniculata_contig7865:2276..10715 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7865.15885.1mRNA_H-paniculata_contig7865.15885.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7865 375..10735 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7865.15885.1 ID=prot_H-paniculata_contig7865.15885.1|Name=mRNA_H-paniculata_contig7865.15885.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=404bp
MPESMQLVARLNAEAGGKLSVFDRLASTTTESRRQKVNDRDQLQENLRRK
ARQDAIRKKKDFKILPLPGSSNGQPPAVGLGSTGSSISSSLSSTMGSTMS
VAEAVANLEKNSSTSNSEGHDGGRSNATTSLRDSRPGTGRGGVEETTAPT
WAAGGGLSQHRGAVEPIKELSVFERLQAPSTRRSSGDHVTPTRSTFSKNI
PSKKPRSPSSQNQKQAPPNHSKAGGVAHKKYMNNINKMGPGNATLAARLQ
AEAELSRVPNTHSSSGSGSPPRAIAAQSGADDSSASGNSLNSNSKDGNGS
AEGLDVVEEVSEGTGIERRRERRPVGARGDRDGATHGRGGHVTGTSGGAS
GNNVFDRLRNKLTESEQRRQAEAMAASGRHPFNSRRASQDKEAVPNGGGS
SHT*
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