prot_H-paniculata_contig7860.15882.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7860.15882.1
Unique Nameprot_H-paniculata_contig7860.15882.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length149
Homology
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BLAST of mRNA_H-paniculata_contig7860.15882.1 vs. uniprot
Match: D7FT29_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT29_ECTSI)

HSP 1 Score: 68.6 bits (166), Expect = 9.840e-11
Identity = 46/118 (38.98%), Postives = 57/118 (48.31%), Query Frame = 0 
Query:    1 MDFFLLLDASDSAITLCWDRHTEKDGCPVIEEVQMKKQTTSTSLSPAPAAGIAEAGSVDQQRDPEDSEAPG---------------WKTLSNSLKTGALRKKNLEAATGYVFRRRARQ 103
            M  FLLLDA+D AITLCW+R  +      +EEVQMK +TT  +        + +   V  +  P                      W TLS SL + ALRKK L   T YVFRRRAR+
Sbjct:    1 MATFLLLDATDQAITLCWERGPDVS----VEEVQMKMKTTPANDQQRQQQEVKDGSEVGNEVAPSSGSXXXXXXXXXXXXXXXXXDWVTLSKSLGSSALRKKKLAPGTEYVFRRRARK 114
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7860.15882.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FT29_ECTSI9.840e-1138.98Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7860contigH-paniculata_contig7860:4294..5659 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7860.15882.1mRNA_H-paniculata_contig7860.15882.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7860 4294..6654 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7860.15882.1 ID=prot_H-paniculata_contig7860.15882.1|Name=mRNA_H-paniculata_contig7860.15882.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=149bp
MDFFLLLDASDSAITLCWDRHTEKDGCPVIEEVQMKKQTTSTSLSPAPAA
GIAEAGSVDQQRDPEDSEAPGWKTLSNSLKTGALRKKNLEAATGYVFRRR
ARQDGRSSTAERAPVGQVDLDTVAHEIEVYLDTHTFCISKFFLLKCKG*
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