prot_H-paniculata_contig783.15856.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig783.15856.1
Unique Nameprot_H-paniculata_contig783.15856.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length247
Homology
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BLAST of mRNA_H-paniculata_contig783.15856.1 vs. uniprot
Match: D7FKK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKK4_ECTSI)

HSP 1 Score: 118 bits (295), Expect = 8.610e-28
Identity = 102/250 (40.80%), Postives = 125/250 (50.00%), Query Frame = 0 
Query:    2 LFNLPKEEIDSIREEARMLVVGGEGGSLSALSDSLPTPPTQVGGPCMGFRYSQCPDTRQMREERRSRTASARRGPA--SIRPSPAAPYVDARFVDALSAP-VVPPLDFSQLRNNGDFFPVAKVFQRHHRPSSEATTTAEKAAGQEDNDRHRHMVQAASSPVTLLLDDSPLAFVDSIGLQRGITKEIATSLQQPGLSQPKPPDIPLPGLRTVVAAGRGPTSSE--RESLSARLARLTGVGNSGRVVPLELV 246
            LFNLPKEEIDSIREEA  L+        S    SLPTPP Q      G   S    T   +++ R+ TA ARRGPA  + R   AAP+VD+RFV   ++P VVPPLDF++L N+   FP   V+        E          +  N R R  VQA + P       S     D   L  G    + +S Q PGL+ P+PP +P       + A     S E  RESLSARLARL      GRVVP+ELV
Sbjct:  118 LFNLPKEEIDSIREEASRLLESEPASDFS----SLPTPPGQQRRVRDGSASSVRRTTDSDQDDHRAMTAPARRGPAYGNGRSPTAAPFVDSRFVHLSTSPAVVPPLDFARLNNDPSKFPPGDVWSYPAAKGGEMLRDRLPTQDRNPNSRQRMRVQARNGPA------SGHTTRDDQELHGG--PAVISSFQAPGLTHPEPPAVPF------LRAKPETESKELGRESLSARLARLAAGRTPGRVVPVELV 349
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig783.15856.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FKK4_ECTSI8.610e-2840.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig783contigH-paniculata_contig783:30018..31180 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig783.15856.1mRNA_H-paniculata_contig783.15856.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig783 30018..31180 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig783.15856.1 ID=prot_H-paniculata_contig783.15856.1|Name=mRNA_H-paniculata_contig783.15856.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=247bp
DLFNLPKEEIDSIREEARMLVVGGEGGSLSALSDSLPTPPTQVGGPCMGF
RYSQCPDTRQMREERRSRTASARRGPASIRPSPAAPYVDARFVDALSAPV
VPPLDFSQLRNNGDFFPVAKVFQRHHRPSSEATTTAEKAAGQEDNDRHRH
MVQAASSPVTLLLDDSPLAFVDSIGLQRGITKEIATSLQQPGLSQPKPPD
IPLPGLRTVVAAGRGPTSSERESLSARLARLTGVGNSGRVVPLELV*
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