prot_H-paniculata_contig775.15774.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig775.15774.1
Unique Nameprot_H-paniculata_contig775.15774.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length216
Homology
BLAST of mRNA_H-paniculata_contig775.15774.1 vs. uniprot
Match: D8LUC2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUC2_ECTSI)

HSP 1 Score: 277 bits (708), Expect = 7.110e-92
Identity = 151/215 (70.23%), Postives = 175/215 (81.40%), Query Frame = 0
Query:    1 MKFTAASVLVGFASTQAFMVAPVMKTSGTEASPNTRADFAKKFSAGVAAASVAAAAPVLAKAGTGAKQNLFGVVGADMNLGGGASNYFAESETYSPYSPYGKGEGSLYEKDDGSFMLKVKLDILKDTQKRLQNVPKYIETKKWEEIRSLLTAKAYNVRDAMNTLAGDKQDAANVAKVFFRDIEEITVYSRLKNQEEALKAYNNAQTHLTKYLSLI 215
            MKFTAASVLVG  ++QAFMV P MKT+G +   ++RADFAK  + G  AA+ A AAP LAKAGTGAKQN FGV+GAD  LGGG SNYFAES+TYSPYSPY KG+ +LY+  D +FM KVK+DILKD+QKRLQ VP +IE KKWEEIRSLLTAKAY++RDAMNTLA DK  AA VAKVF+RDIE++TVY+R KN     KAYN+AQ HLTKYLSLI
Sbjct:    1 MKFTAASVLVGLTTSQAFMVQPTMKTAGPDGG-SSRADFAKLVT-GTVAATAAVAAPALAKAGTGAKQNWFGVIGADPELGGGMSNYFAESDTYSPYSPYSKGDDALYKSSDQAFMTKVKIDILKDSQKRLQTVPGFIEGKKWEEIRSLLTAKAYSLRDAMNTLAADKPQAAGVAKVFYRDIEQLTVYARQKNGPACTKAYNDAQEHLTKYLSLI 213          
BLAST of mRNA_H-paniculata_contig775.15774.1 vs. uniprot
Match: A0A6H5KN94_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN94_9PHAE)

HSP 1 Score: 192 bits (488), Expect = 2.680e-59
Identity = 107/153 (69.93%), Postives = 124/153 (81.05%), Query Frame = 0
Query:    1 MKFTAASVLVGFASTQAFMVAPVMKTSGTEASPNTRADFAKKFSAGVAAASVAAAAPVLAKAGTGAKQNLFGVVGADMNLGGGASNYFAESETYSPYSPYGKGEGSLYEKDDGSFMLKVKLDILKDTQKRLQNVPKYIETKKWEEIRSLLTAK 153
            MKFTAASVLVG  ++QAFMV P MKT+G +   ++RADFAK  + G  AA+ A AAP LAKAGTGAKQN FGV+GAD  LGGG SNYFAES+TYSPYSPY KG+ +LY+  D +FM KVK+DILKD+QKRLQ VP +IE KKWEEIRSLLTAK
Sbjct:    1 MKFTAASVLVGLTTSQAFMVQPTMKTAGPDGG-SSRADFAKLVT-GTVAATAAVAAPALAKAGTGAKQNWFGVIGADQELGGGMSNYFAESDTYSPYSPYSKGDEALYKTSDQAFMTKVKIDILKDSQKRLQTVPGFIEGKKWEEIRSLLTAK 151          
BLAST of mRNA_H-paniculata_contig775.15774.1 vs. uniprot
Match: A0A7S3K4S5_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K4S5_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 1.720e-20
Identity = 66/173 (38.15%), Postives = 94/173 (54.34%), Query Frame = 0
Query:   45 AGVAAASVAAAAPVLAKAGTGAKQNLFGVVG-ADMNLGGGASNYFAESETYSPYSPYG-KGEGSLYEKDDGSFMLKVKLDILKDTQKRLQNVPKYIETKKWEEIRSLLTAKAYNVRDAMNTLAGDKQDAANVAKVFFRDIEEITVYSRLKNQEEALKAYNNAQTHLTKYLSLI 215
            AGVA+A  A  +  LA  G   K + FG+ G AD    G A    A   +YSPYSPY  KGE S+Y+K     +   K ++  ++ KR+  V KYIE KKWEE+R+ L  + Y +R AMN LA  K +A    K F+ ++E + + S+ K+ + A K Y +    L  +  LI
Sbjct:   36 AGVASA-FAGVSAALAAEGESPKFSFFGIGGNADTFSEGAAYGIDANRPSYSPYSPYPPKGESSVYKKGSKEEVA-FKKNVFSESAKRVAKVDKYIEAKKWEEVRAELDRQTYEMRGAMNYLASGKPEAEKAKKKFYAELESVNLASKKKDPKAAAKEYGDMMAALDAFTKLI 206          
BLAST of mRNA_H-paniculata_contig775.15774.1 vs. uniprot
Match: A0A7S1U5G8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U5G8_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 7.220e-14
Identity = 43/108 (39.81%), Postives = 59/108 (54.63%), Query Frame = 0
Query:  108 YEKDDGSFMLKVKLDILKDTQKRLQNVPKYIETKKWEEIRSLLTAKAYNVRDAMNTLAGDKQDAANVAKVFFRDIEEITVYSRLKNQEEALKAYNNAQTHLTKYLSLI 215
            Y  D+ +F  K    +  ++ KR+  V KYIE KKWEE+R+ L  + YN+R  MN LA  K DA   AK F+  +E + +YS+ K Q  A +AY      L  Y  LI
Sbjct:    6 YNSDEVAFNKK----MFTESTKRVAKVDKYIEAKKWEEVRAELQRQVYNMRGTMNYLATGKPDAEKAAKDFYLAMEAVDLYSKKKQQAPAAEAYKGMMAALDSYSKLI 109          
BLAST of mRNA_H-paniculata_contig775.15774.1 vs. uniprot
Match: B8BSY9_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BSY9_THAPS)

HSP 1 Score: 75.1 bits (183), Expect = 4.900e-13
Identity = 58/170 (34.12%), Postives = 95/170 (55.88%), Query Frame = 0
Query:   36 RADFAKKFSAGVAAASVAAAAPVLAKAGTGAKQ--NLFGVVGADMNLGGGASNYFAES-ETYSPYSPYGK--GEGSLYEKDDGSFMLKVKLDILKDTQKRLQNVPKYIETKKWEEIRSLLTAKAYNVRDAMNTLAGDKQDAANVAKVFFRDIEEITVYSRLKNQEEALKA 200
            +A+ +++ +    AA+ AA  P  A A  G     ++FGV+G   +   GA+    +S ETYSPYS YGK   + +L+E  +   + + K  I+ ++QKRL+N+P Y+E K+W  ++  LT   Y  R A+  LA    +   +AK FF+ IEE ++ + LKN ++   A
Sbjct:   29 QAENSRREALSTIAAATAAILPAAANAAAGESPRFSVFGVIGDGTSYSEGAAYGSDQSAETYSPYSVYGKVGSKDALFEAGNAGEIARKKGYIV-ESQKRLKNLPGYVEKKQWFNVKDELTRYMYETRGAVRGLA-QTPEQKKLAKAFFQAIEEASLQATLKNGDKCAAA 196          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig775.15774.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LUC2_ECTSI7.110e-9270.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KN94_9PHAE2.680e-5969.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3K4S5_9STRA1.720e-2038.15Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S1U5G8_9STRA7.220e-1439.81Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
B8BSY9_THAPS4.900e-1334.12Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023222PsbQ-like domain superfamilyGENE3D1.20.120.290coord: 108..215
e-value: 5.0E-19
score: 70.3
IPR023222PsbQ-like domain superfamilySUPERFAMILY101112Oxygen-evolving enhancer protein 3,coord: 120..215
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..215
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..31
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..31

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig775contigH-paniculata_contig775:17706..20676 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig775.15774.1mRNA_H-paniculata_contig775.15774.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig775 17706..21559 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig775.15774.1 ID=prot_H-paniculata_contig775.15774.1|Name=mRNA_H-paniculata_contig775.15774.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=216bp
MKFTAASVLVGFASTQAFMVAPVMKTSGTEASPNTRADFAKKFSAGVAAA
SVAAAAPVLAKAGTGAKQNLFGVVGADMNLGGGASNYFAESETYSPYSPY
GKGEGSLYEKDDGSFMLKVKLDILKDTQKRLQNVPKYIETKKWEEIRSLL
TAKAYNVRDAMNTLAGDKQDAANVAKVFFRDIEEITVYSRLKNQEEALKA
YNNAQTHLTKYLSLI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023222PsbQ-like_dom_sf