mRNA_H-paniculata_contig775.15774.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig775.15774.1 vs. uniprot
Match: D8LUC2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUC2_ECTSI) HSP 1 Score: 277 bits (709), Expect = 1.000e-87 Identity = 151/215 (70.23%), Postives = 175/215 (81.40%), Query Frame = 1
Query: 1 MKFTAASVLVGFASTQAFMVAPVMKTSGTEASPNTRADFAKKFSAGVAAASVAAAAPVLAKAGTGAKQNLFGVVGADMNLGGGASNYFAESETYSPYSPYGKGEGSLYEKDDGSFMLKVKLDILKDTQKRLQNVPKYIETKKWEEIRSLLTAKAYNVRDAMNTLAGDKQDAANVAKVFFRDIEEITVYSRLKNQEEALKAYNNAQTHLTKYLSLI 645
MKFTAASVLVG ++QAFMV P MKT+G + ++RADFAK + G AA+ A AAP LAKAGTGAKQN FGV+GAD LGGG SNYFAES+TYSPYSPY KG+ +LY+ D +FM KVK+DILKD+QKRLQ VP +IE KKWEEIRSLLTAKAY++RDAMNTLA DK AA VAKVF+RDIE++TVY+R KN KAYN+AQ HLTKYLSLI
Sbjct: 1 MKFTAASVLVGLTTSQAFMVQPTMKTAGPDGG-SSRADFAKLVT-GTVAATAAVAAPALAKAGTGAKQNWFGVIGADPELGGGMSNYFAESDTYSPYSPYSKGDDALYKSSDQAFMTKVKIDILKDSQKRLQTVPGFIEGKKWEEIRSLLTAKAYSLRDAMNTLAADKPQAAGVAKVFYRDIEQLTVYARQKNGPACTKAYNDAQEHLTKYLSLI 213
BLAST of mRNA_H-paniculata_contig775.15774.1 vs. uniprot
Match: A0A6H5KN94_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN94_9PHAE) HSP 1 Score: 192 bits (488), Expect = 1.270e-55 Identity = 107/153 (69.93%), Postives = 124/153 (81.05%), Query Frame = 1
Query: 1 MKFTAASVLVGFASTQAFMVAPVMKTSGTEASPNTRADFAKKFSAGVAAASVAAAAPVLAKAGTGAKQNLFGVVGADMNLGGGASNYFAESETYSPYSPYGKGEGSLYEKDDGSFMLKVKLDILKDTQKRLQNVPKYIETKKWEEIRSLLTAK 459
MKFTAASVLVG ++QAFMV P MKT+G + ++RADFAK + G AA+ A AAP LAKAGTGAKQN FGV+GAD LGGG SNYFAES+TYSPYSPY KG+ +LY+ D +FM KVK+DILKD+QKRLQ VP +IE KKWEEIRSLLTAK
Sbjct: 1 MKFTAASVLVGLTTSQAFMVQPTMKTAGPDGG-SSRADFAKLVT-GTVAATAAVAAPALAKAGTGAKQNWFGVIGADQELGGGMSNYFAESDTYSPYSPYSKGDEALYKTSDQAFMTKVKIDILKDSQKRLQTVPGFIEGKKWEEIRSLLTAK 151
BLAST of mRNA_H-paniculata_contig775.15774.1 vs. uniprot
Match: A0A7S3K4S5_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K4S5_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 7.900e-19 Identity = 66/173 (38.15%), Postives = 94/173 (54.34%), Query Frame = 1
Query: 133 AGVAAASVAAAAPVLAKAGTGAKQNLFGVVG-ADMNLGGGASNYFAESETYSPYSPYG-KGEGSLYEKDDGSFMLKVKLDILKDTQKRLQNVPKYIETKKWEEIRSLLTAKAYNVRDAMNTLAGDKQDAANVAKVFFRDIEEITVYSRLKNQEEALKAYNNAQTHLTKYLSLI 645
AGVA+A A + LA G K + FG+ G AD G A A +YSPYSPY KGE S+Y+K + K ++ ++ KR+ V KYIE KKWEE+R+ L + Y +R AMN LA K +A K F+ ++E + + S+ K+ + A K Y + L + LI
Sbjct: 36 AGVASA-FAGVSAALAAEGESPKFSFFGIGGNADTFSEGAAYGIDANRPSYSPYSPYPPKGESSVYKKGSKEEVA-FKKNVFSESAKRVAKVDKYIEAKKWEEVRAELDRQTYEMRGAMNYLASGKPEAEKAKKKFYAELESVNLASKKKDPKAAAKEYGDMMAALDAFTKLI 206
BLAST of mRNA_H-paniculata_contig775.15774.1 vs. uniprot
Match: A0A7S1U5G8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U5G8_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 7.400e-13 Identity = 43/108 (39.81%), Postives = 59/108 (54.63%), Query Frame = 1
Query: 322 YEKDDGSFMLKVKLDILKDTQKRLQNVPKYIETKKWEEIRSLLTAKAYNVRDAMNTLAGDKQDAANVAKVFFRDIEEITVYSRLKNQEEALKAYNNAQTHLTKYLSLI 645
Y D+ +F K + ++ KR+ V KYIE KKWEE+R+ L + YN+R MN LA K DA AK F+ +E + +YS+ K Q A +AY L Y LI
Sbjct: 6 YNSDEVAFNKK----MFTESTKRVAKVDKYIEAKKWEEVRAELQRQVYNMRGTMNYLATGKPDAEKAAKDFYLAMEAVDLYSKKKQQAPAAEAYKGMMAALDSYSKLI 109
BLAST of mRNA_H-paniculata_contig775.15774.1 vs. uniprot
Match: B8BSY9_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BSY9_THAPS) HSP 1 Score: 75.1 bits (183), Expect = 7.940e-12 Identity = 58/170 (34.12%), Postives = 95/170 (55.88%), Query Frame = 1
Query: 106 RADFAKKFSAGVAAASVAAAAPVLAKAGTGAKQ--NLFGVVGADMNLGGGASNYFAES-ETYSPYSPYGK--GEGSLYEKDDGSFMLKVKLDILKDTQKRLQNVPKYIETKKWEEIRSLLTAKAYNVRDAMNTLAGDKQDAANVAKVFFRDIEEITVYSRLKNQEEALKA 600
+A+ +++ + AA+ AA P A A G ++FGV+G + GA+ +S ETYSPYS YGK + +L+E + + + K I+ ++QKRL+N+P Y+E K+W ++ LT Y R A+ LA + +AK FF+ IEE ++ + LKN ++ A
Sbjct: 29 QAENSRREALSTIAAATAAILPAAANAAAGESPRFSVFGVIGDGTSYSEGAAYGSDQSAETYSPYSVYGKVGSKDALFEAGNAGEIARKKGYIV-ESQKRLKNLPGYVEKKQWFNVKDELTRYMYETRGAVRGLA-QTPEQKKLAKAFFQAIEEASLQATLKNGDKCAAA 196 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig775.15774.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig775.15774.1 >prot_H-paniculata_contig775.15774.1 ID=prot_H-paniculata_contig775.15774.1|Name=mRNA_H-paniculata_contig775.15774.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=216bp MKFTAASVLVGFASTQAFMVAPVMKTSGTEASPNTRADFAKKFSAGVAAAback to top mRNA from alignment at H-paniculata_contig775:17706..21559+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig775.15774.1 ID=mRNA_H-paniculata_contig775.15774.1|Name=mRNA_H-paniculata_contig775.15774.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3854bp|location=Sequence derived from alignment at H-paniculata_contig775:17706..21559+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig775:17706..21559+ >mRNA_H-paniculata_contig775.15774.1 ID=mRNA_H-paniculata_contig775.15774.1|Name=mRNA_H-paniculata_contig775.15774.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1296bp|location=Sequence derived from alignment at H-paniculata_contig775:17706..21559+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |