prot_H-paniculata_contig775.15773.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig775.15773.1
Unique Nameprot_H-paniculata_contig775.15773.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length412
Homology
[Close]
BLAST of mRNA_H-paniculata_contig775.15773.1 vs. uniprot
Match: D8LUC1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUC1_ECTSI)

HSP 1 Score: 173 bits (438), Expect = 3.010e-46
Identity = 92/164 (56.10%), Postives = 119/164 (72.56%), Query Frame = 0 
Query:   56 PALSDSGGERV--TPDEVLTLGVLALAGLWPGTWVGIAAIIVKQVDRLAHNDCADIAFRRCAMSLVDMLLKSPGDPTVAVETWRHLAAAQARLPEDLSQVLGLACSLLQSRTMEAADIRARKKRRRIASADTVAAISAAPAPLTPPCATALVVMVSDMGREEDE 217
            P  + + GE    TPDEVL LGVLALAGLW G W GIA +IV +V++L  +   D+ FRRCA SLVD+LL+SPG+ ++  +TWR L++ QARLP  L QVLG+ACSLLQ + +EAAD RA++KRRR  S+ ++AA+   P PL PPC T LV MV D+ REE+E
Sbjct:   55 PPRNHANGEAAAATPDEVLALGVLALAGLWSGCWSGIATVIVHKVEKLIRSGSVDVPFRRCAQSLVDLLLQSPGESSLGEDTWRQLSSTQARLPHKLGQVLGIACSLLQRKAVEAADTRAKRKRRRCLSS-SMAALKV-PTPLPPPCTTGLVTMVGDIAREEEE 216
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig775.15773.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LUC1_ECTSI3.010e-4656.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig775contigH-paniculata_contig775:14515..15750 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig775.15773.1mRNA_H-paniculata_contig775.15773.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig775 14059..17475 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig775.15773.1 ID=prot_H-paniculata_contig775.15773.1|Name=mRNA_H-paniculata_contig775.15773.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=412bp
MDAAAATPSNHSNGMNVPAVQARQRYVPILPRPSVPEPLPPPPPPPPLMV
DQRLAPALSDSGGERVTPDEVLTLGVLALAGLWPGTWVGIAAIIVKQVDR
LAHNDCADIAFRRCAMSLVDMLLKSPGDPTVAVETWRHLAAAQARLPEDL
SQVLGLACSLLQSRTMEAADIRARKKRRRIASADTVAAISAAPAPLTPPC
ATALVVMVSDMGREEDEARRREQAKEEDERGEEGRVGLELENEPGLLTPP
HQLLSLSMPLTPEAPGPEVHISHHISPPPPPPPPPLPHSHSYNSALQRIP
LASPGHVQNGVAVWGVRSIVGNGISVDLDAAGAPAGGCAPSPIAPTGLVP
DPTHSQRPFVWDVNAGSQMEYYSTPDGQFSPQRQGEGGGGSPRRSPVGAS
SIDGDLGSTIP*
back to top