prot_H-paniculata_contig775.15771.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig775.15771.1
Unique Nameprot_H-paniculata_contig775.15771.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length124
Homology
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BLAST of mRNA_H-paniculata_contig775.15771.1 vs. uniprot
Match: D8LUB9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUB9_ECTSI)

HSP 1 Score: 62.0 bits (149), Expect = 8.230e-9
Identity = 51/96 (53.12%), Postives = 62/96 (64.58%), Query Frame = 0 
Query:   16 LDEFVPENFCDVIAYDVSDEQVADAIDEMETKLKD---KVKXXXXXXXXXXXXXXX-------KTSCDNVQKNIQETLDRNIDIFDRYVKKNVSVV 101
            L +F  ENFCD + YD  D+ +A+A+ +ME +L     KVK     XXXXXXXXXX       KT CDNVQ  IQ+  DRNIDI DRY+KKNV+ V
Sbjct:   24 LGDFKTENFCDEV-YDYMDDSLAEAMVKMEEELIQAAAKVKGADQGXXXXXXXXXXXDIEASIKTCCDNVQTRIQQEFDRNIDILDRYIKKNVAAV 118
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BLAST of mRNA_H-paniculata_contig775.15771.1 vs. uniprot
Match: A0A6H5KN64_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN64_9PHAE)

HSP 1 Score: 52.8 bits (125), Expect = 1.590e-5
Identity = 23/33 (69.70%), Postives = 26/33 (78.79%), Query Frame = 0 
Query:   69 KTSCDNVQKNIQETLDRNIDIFDRYVKKNVSVV 101
            KT CDNVQ  IQ+  DRNIDI DRY+KKNV+ V
Sbjct:   33 KTCCDNVQTRIQQEFDRNIDILDRYIKKNVAAV 65
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig775.15771.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LUB9_ECTSI8.230e-953.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KN64_9PHAE1.590e-569.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008685Centromere protein Mis12PFAMPF05859Mis12coord: 18..102
e-value: 3.2E-7
score: 30.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig775contigH-paniculata_contig775:5788..7470 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig775.15771.1mRNA_H-paniculata_contig775.15771.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig775 5788..7637 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig775.15771.1 ID=prot_H-paniculata_contig775.15771.1|Name=mRNA_H-paniculata_contig775.15771.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=124bp
MASSAAAAESLQPQQLDEFVPENFCDVIAYDVSDEQVADAIDEMETKLKD
KVKADGVKQQQQDVEDKIKTSCDNVQKNIQETLDRNIDIFDRYVKKNVSV
VKGALSDLSAVAPAAGAMDSAARG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008685Centromere_Mis12