prot_H-paniculata_contig7725.15748.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7725.15748.1
Unique Nameprot_H-paniculata_contig7725.15748.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length460
Homology
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BLAST of mRNA_H-paniculata_contig7725.15748.1 vs. uniprot
Match: D7FM39_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM39_ECTSI)

HSP 1 Score: 286 bits (732), Expect = 2.760e-82
Identity = 176/426 (41.31%), Postives = 243/426 (57.04%), Query Frame = 0 
Query:   45 LIENVTEGFLPSINASLVYIATSADLLVSCVSLRGNSTSAN---STDCPADSARELADDARAELDSQLVLAREGLQEYADVFEEYRTSVTAVYASLIVFYEGATSYFDTENIDISGLGSWADIQNTDLILDDVTLPDISGILTDYANVATASEIWEQTHQAYGNFSDSLASV-------VFTLAEALEASTAELLSNISFTLEDYDPPRYANGSSHVESDALLESTVSEFEKTSDTFNSQALALLDDIGPWAPNLSFPAAQLLNYTFGVSKSVAAFLSSVPYHFEEFEKKNVILDSLGVSATALALLLLTVDYLFRCSSSLRLMLQFWSGAGLGIPDADLMAEKPIFDEQGIVASFSTALLKIILHPITTVVFYSTVTAILVYQTTVLYLPWYYDYVAGCVDHTEEGSFLTRAANTFAYNYASDEG 460
            L+ENVT     SI+ SL  I+   D LVSCVSLRG         +  CP +SARELAD AR ELD QL +AR   QEYAD +E Y+ S    Y + I FY G     D   +DI+G G W+ +  +D  +  V +P  SG+L+D+ +  T+SEIWE    AYGN+SD ++S        V  L E   A T   L+NIS                  +S ALL+S  SEF+  +D ++S++LALL+ +GP  PNLSFPA+  LN T  V  +     S V Y F  F   +V  DS  VS   +ALLLL  DY+FR +SSLRL ++FWS  GLG+PDAD+  +K      G  A     ++++++HP TTV+F + V ++++Y    +Y P + DY AGCV+ ++ GSF  +   + AYNYA++EG
Sbjct:  492 LLENVTLEIPESISESLEDISALGDALVSCVSLRGEDDDGXXXAAAPCPVESARELADAAREELDYQLEVARAAFQEYADTYEAYKASAEESYDNWIAFYSGVVLLLDDHRVDITGSGPWSVLTVSDFTIPPVEVPSASGVLSDFGDALTSSEIWETVSGAYGNYSDGVSSRSGQITADVEALREEWRALTNAALANIS-----------------TDSSALLDSAGSEFQAEADGYSSRSLALLEGLGPAGPNLSFPASPSLNSTLLVGGASTVLPSPVDYTFAAFTATDVSFDSWVVSLGNIALLLLAADYIFRTASSLRLFVRFWSRGGLGLPDADVRVDKAAASAGGAAAGLRRGVVRVLIHPATTVLFSAVVLSLVLYNLASVYGPLFADYRAGCVEKSQNGSFFGQNVYSVAYNYAAEEG 900
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7725.15748.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FM39_ECTSI2.760e-8241.31Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..330
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 418..460
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 397..417
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 331..349
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 350..396
NoneNo IPR availableTMHMMTMhelixcoord: 327..349
NoneNo IPR availableTMHMMTMhelixcoord: 405..427

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7725contigH-paniculata_contig7725:1266..3484 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7725.15748.1mRNA_H-paniculata_contig7725.15748.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7725 1266..3484 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7725.15748.1 ID=prot_H-paniculata_contig7725.15748.1|Name=mRNA_H-paniculata_contig7725.15748.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=460bp
MNAGFAANATAAVEGLASYALERSAYDESYVANNTEVKFEDIDYLIENVT
EGFLPSINASLVYIATSADLLVSCVSLRGNSTSANSTDCPADSARELADD
ARAELDSQLVLAREGLQEYADVFEEYRTSVTAVYASLIVFYEGATSYFDT
ENIDISGLGSWADIQNTDLILDDVTLPDISGILTDYANVATASEIWEQTH
QAYGNFSDSLASVVFTLAEALEASTAELLSNISFTLEDYDPPRYANGSSH
VESDALLESTVSEFEKTSDTFNSQALALLDDIGPWAPNLSFPAAQLLNYT
FGVSKSVAAFLSSVPYHFEEFEKKNVILDSLGVSATALALLLLTVDYLFR
CSSSLRLMLQFWSGAGLGIPDADLMAEKPIFDEQGIVASFSTALLKIILH
PITTVVFYSTVTAILVYQTTVLYLPWYYDYVAGCVDHTEEGSFLTRAANT
FAYNYASDEG
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