prot_H-paniculata_contig7720.15742.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7720.15742.1
Unique Nameprot_H-paniculata_contig7720.15742.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length734
Homology
[Close]
BLAST of mRNA_H-paniculata_contig7720.15742.1 vs. uniprot
Match: D8LC94_ECTSI (SET domain and mariner transposase fusion n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC94_ECTSI)

HSP 1 Score: 119 bits (297), Expect = 4.910e-24
Identity = 59/99 (59.60%), Postives = 68/99 (68.69%), Query Frame = 0 
Query:  636 PDRPPGASAVKTVARAETVAIVEYAHDPDRGVDLRSCGTQAVGSVAAVQANISVPGMIGTHSALDTDLLRARDGAWTAGVGYRPGEAYAKWGRFPCETP 734
            P   P  + VK + R E +A VEYAHDP+RG+DLRSCGTQ VG+ AA QANI+V GM GTHSA+         G  T GVGY+PGE YAKWGRF CE P
Sbjct:  472 PSIEPQENMVKVLVRTEALASVEYAHDPERGLDLRSCGTQIVGNSAATQANIAVAGMSGTHSAVGNGF--GAQGPRTPGVGYQPGEPYAKWGRFACEMP 568
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7720.15742.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LC94_ECTSI4.910e-2459.60SET domain and mariner transposase fusion n=1 Tax=... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7720contigH-paniculata_contig7720:6691..10541 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7720.15742.1mRNA_H-paniculata_contig7720.15742.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7720 6691..10541 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7720.15742.1 ID=prot_H-paniculata_contig7720.15742.1|Name=mRNA_H-paniculata_contig7720.15742.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=734bp
MFARDGKGASDDPYNFDIAADDRRYGVDTKTSSGNSQTKLGSSKSLNSGL
RVALPSDAIDHVGSSMATSSTQHIIPASETTSFRASAPAGIPSALDKAMG
FLNKYKEGGSVRNSDASTPTTTANTPIGAFRHSSGRVNKVRDKPNNGYED
DDDIDISLSSEDAGIGVTTQKKLMTTSELVSGLPKRVDPDVDKEHGMVAT
SRSLTGIRSSAPFLTARDLGIRVDEGLGKCVTAPKAAVSPIGLGRNINPA
LSMVNSSIKEYTEATKTSSGLRLSMNIPGSPRSDALKDRGKGHRSTNEGD
SHDASNVGSSGSRARSNSRGTMFQELDTTSDQRSLGTSPEGGSPFRRDQS
LGRCGHPGSGGTMGNVVSFNDLAAITGHLAVPAADTVKSAISGGKGGGAQ
VFQKEKEKEEKEEHDDDGDDDYEDDDFEELEATIESGDCSGSLPGQAKSN
GKLSDSTNGIRDIMLLTMAIQPSTIQTAPEDGYDSPMDDRGQGTNKRDPS
QAWNEPADDSIIRRPHLSSEKVDRGIRPDQNVSRSANSPTYIRTSPSRKI
ANEVHDGDGDASGEETKAATVATMTNASVNNQMSKEHNSLARIKGPEKSR
APVSRGRETTSNCGTNITVLTNEGVVIDRSSEVRLPDRPPGASAVKTVAR
AETVAIVEYAHDPDRGVDLRSCGTQAVGSVAAVQANISVPGMIGTHSALD
TDLLRARDGAWTAGVGYRPGEAYAKWGRFPCETP
back to top