prot_H-paniculata_contig772.15740.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig772.15740.1
Unique Nameprot_H-paniculata_contig772.15740.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length230
Homology
BLAST of mRNA_H-paniculata_contig772.15740.1 vs. uniprot
Match: D8LS40_ECTSI (Rab50, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS40_ECTSI)

HSP 1 Score: 383 bits (983), Expect = 2.630e-133
Identity = 190/223 (85.20%), Postives = 204/223 (91.48%), Query Frame = 0
Query:    6 APRSSVEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKKITSTDGTVCKMQIWDTAGQERFRAMAPMYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACNKTDMESQRVVSRARAEQFATDVGGLLCETSAKENWGVQELFLKVCDRVMETRGPELRGETTGTHGGAGARSGAKHKFGLSPAAHAAGFGAEGSGESGGGCC 228
            AP++SVEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTK+IT+TDGT+CKMQIWDTAGQERFRAMAP+YYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIAC KTDMES+RVVSRARAE FAT+VGG++CETSAKENWGV ELF +VCDR METRGPELRG+ +G   G G R   K KFGLSPAAHAAGFG +   ESGGGCC
Sbjct:    6 APKTSVEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACTKTDMESKRVVSRARAEHFATEVGGIICETSAKENWGVNELFARVCDRAMETRGPELRGQASGGAAGTGGR---KSKFGLSPAAHAAGFGGDTGAESGGGCC 225          
BLAST of mRNA_H-paniculata_contig772.15740.1 vs. uniprot
Match: A0A7S2XTR6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XTR6_9STRA)

HSP 1 Score: 291 bits (746), Expect = 9.170e-98
Identity = 141/183 (77.05%), Postives = 159/183 (86.89%), Query Frame = 0
Query:    1 METGTAPRSSVEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKKITSTDGTVCKMQIWDTAGQERFRAMAPMYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACNKTDMESQRVVSRARAEQFATDVGGLLCETSAKENWGVQELFLKVCDRVMETRGPEL 183
            M T +   + VEFKVVVLGDKGVGKTCLVLRFIEGYF+PKQQSTIGAFFLTKKI +  G  CKMQIWDTAGQERFRAMAPMYYRNAA A+VCFDI DE+SF KMKDWVEEL+TNVPEGKLVLAIACNKTD+ES RVVSRARAEQ++  +  + CETSAKENWGV E+F KV ++V+ETRG ++
Sbjct:    1 MATSSFGGAPVEFKVVVLGDKGVGKTCLVLRFIEGYFSPKQQSTIGAFFLTKKIQTEGGVNCKMQIWDTAGQERFRAMAPMYYRNAAAAIVCFDITDEDSFTKMKDWVEELKTNVPEGKLVLAIACNKTDLESNRVVSRARAEQYSAAIKAIYCETSAKENWGVNEIFEKVSEKVIETRGLQV 183          
BLAST of mRNA_H-paniculata_contig772.15740.1 vs. uniprot
Match: A0A7S3Y4J2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y4J2_HETAK)

HSP 1 Score: 286 bits (732), Expect = 5.570e-95
Identity = 142/197 (72.08%), Postives = 158/197 (80.20%), Query Frame = 0
Query:   11 VEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKKITSTDGTVCKMQIWDTAGQERFRAMAPMYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACNKTDMESQRVVSRARAEQFATDVGGLLCETSAKENWGVQELFLKVCDRVMETRGPELRGET------TGTHGGAGARSGAK 201
            VEFKVVVLGDKGVGK+CLVLRFIEGYF+PKQQSTIGAFFL+K I + DGT CKMQIWDTAGQERFRAMA MYYRNAA A+VCFDI DEESF KMKDWV+EL+ NVPEG+LVLAIA  KTD+E+QR VSR RAEQ+A  +G L CETSAKENWGV E+F     RV+E RGPELR          G +G  G R GA+
Sbjct:   12 VEFKVVVLGDKGVGKSCLVLRFIEGYFSPKQQSTIGAFFLSKTIEAADGTACKMQIWDTAGQERFRAMASMYYRNAAAAIVCFDITDEESFSKMKDWVQELKANVPEGRLVLAIAATKTDLEAQRAVSRGRAEQYAQSIGALCCETSAKENWGVTEVFEAAAARVLELRGPELRAAAQAQARGVGVYGAGGRRPGAQ 208          
BLAST of mRNA_H-paniculata_contig772.15740.1 vs. uniprot
Match: F0XY01_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XY01_AURAN)

HSP 1 Score: 251 bits (642), Expect = 1.700e-81
Identity = 130/208 (62.50%), Postives = 156/208 (75.00%), Query Frame = 0
Query:    8 RSSVEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKKITSTDGTVCKMQIWDTAGQERFRAMAPMYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACNKTDMESQRVVSRARAEQFATDVGGLLCETSAKENWGVQELFLKVCDRVMETRGPELRGETTGTHGGAGARSGAKHKFGLSPAAHAAGF 215
            + + EFK+V+LGD+GVGKTCLVLRFIEG +  +QQSTIGAFFLTKKI +  G  CK+QIWDTAGQERFRAMAPMYYRNAA A+VCFD+ DE +F  MKDWVEEL+TNV +  LV+AIACNK D+++ R VSRARAEQFA  +  ++ +TSAKEN+GV ELF  V + V++ RG EL        GG G   G     GLS AA AAGF
Sbjct:    6 QKNYEFKIVLLGDRGVGKTCLVLRFIEGLYNSRQQSTIGAFFLTKKIVTAQGDACKIQIWDTAGQERFRAMAPMYYRNAAAAIVCFDVTDESTFNTMKDWVEELKTNVVDKNLVIAIACNKADLDT-RQVSRARAEQFARSISAIVLDTSAKENFGVAELFAAVSEHVIKLRGQELCSTPGAPRGGGGGPGGR----GLSLAARAAGF 208          
BLAST of mRNA_H-paniculata_contig772.15740.1 vs. uniprot
Match: A0A7S3NK22_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NK22_9STRA)

HSP 1 Score: 247 bits (630), Expect = 1.130e-79
Identity = 120/187 (64.17%), Postives = 148/187 (79.14%), Query Frame = 0
Query:   12 EFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKKITSTDGTVCKMQIWDTAGQERFRAMAPMYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACNKTDMESQRVVSRARAEQFATDVGGLLCETSAKENWGVQELFLKVCDRVMETRGPELRGETTGTHGGAGARS 198
            EFK+V+LGD+GVGKTCLVLRFIEG +  +QQSTIGAFFLTKKI +++G  CK+QIWDTAGQERFRAMAPMYYRNAA A+VCFD+ DE +F  MKDWVEEL+TNV +  LV+AIACNK D+++ R VSRARAE FA  +  ++ +TSAKEN+GV ELF  V ++V+  RG EL  ++    G  GA S
Sbjct:   15 EFKIVLLGDRGVGKTCLVLRFIEGLYNSRQQSTIGAFFLTKKIVTSNGDACKIQIWDTAGQERFRAMAPMYYRNAAAAIVCFDVTDESTFNTMKDWVEELKTNVVDKNLVIAIACNKADLDT-RQVSRARAESFARSIDAIILDTSAKENFGVSELFTAVSEQVITLRGHELEAQSNNNRGKGGATS 200          
BLAST of mRNA_H-paniculata_contig772.15740.1 vs. uniprot
Match: A0A835ZBF8_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBF8_9STRA)

HSP 1 Score: 241 bits (615), Expect = 3.300e-78
Identity = 117/166 (70.48%), Postives = 136/166 (81.93%), Query Frame = 0
Query:   12 EFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKKITSTDGTVCKMQIWDTAGQERFRAMAPMYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGK--LVLAIACNKTDMESQRVVSRARAEQFATDVGGLLCETSAKENWGVQELFLKVCDRV 175
            EFK+ VLGDKGVGKTCLVLRFIEGYF+  QQSTIGAFFLTK +   +G +CK+QIWDTAGQERFRAMAPMYYRNAA A+VC DI DEESF KMKDWVEE++ NVP G+  L + +A NKTD+E +RVVSRARAE+FA  +G  + ETSA+ENWGV  LF   C+RV
Sbjct:    1 EFKICVLGDKGVGKTCLVLRFIEGYFSQNQQSTIGAFFLTKSLP-VNGVLCKLQIWDTAGQERFRAMAPMYYRNAAAAIVCCDITDEESFDKMKDWVEEIKMNVPVGQQGLAIVLALNKTDLEERRVVSRARAEEFAASIGAAVVETSARENWGVARLFECACERV 165          
BLAST of mRNA_H-paniculata_contig772.15740.1 vs. uniprot
Match: A0A7S2BGJ2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BGJ2_9STRA)

HSP 1 Score: 236 bits (603), Expect = 1.960e-75
Identity = 115/162 (70.99%), Postives = 132/162 (81.48%), Query Frame = 0
Query:   22 GVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKKITSTDGTVCKMQIWDTAGQERFRAMAPMYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACNKTDMESQRVVSRARAEQFATDVGGLLCETSAKENWGVQELFLKVCDRVMETRGPEL 183
            GVGKTCLVLRFIEG F  KQQSTIGAFFLTKK+   DG++CK+QIWDTAGQERFRAMAPMYYRNAA A+VCFDI DE SF  MKDWV+ELR N  +  L+LAIACNK D+ S RVVSR RAE FA+ +  +L +TSAKEN GV ELF KV +RV+E++G EL
Sbjct:   17 GVGKTCLVLRFIEGTFTQKQQSTIGAFFLTKKVQLEDGSMCKIQIWDTAGQERFRAMAPMYYRNAAAAIVCFDITDENSFSTMKDWVQELRRNCQDRDLILAIACNKADLSSTRVVSRERAESFASSIKAILMDTSAKENEGVNELFQKVTERVIESQGEEL 178          
BLAST of mRNA_H-paniculata_contig772.15740.1 vs. uniprot
Match: A0A7S3ZPM5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZPM5_9STRA)

HSP 1 Score: 228 bits (582), Expect = 1.840e-72
Identity = 116/182 (63.74%), Postives = 142/182 (78.02%), Query Frame = 0
Query:    3 TGTAPRSSVEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKKITSTDGTVCKMQIWDTAGQERFRAMAPMYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACNKTDMESQRVVSRARAEQFATDVG-GLLCETSAKENWGVQELFLKVCDRVMETRGPEL 183
            +  AP+S  EFKVV+LGD+GVGKTCLVLRFIEG +  +QQSTIGAFFLTKKI +  G  CK+QIWDTAGQERFRAMAPMYYRNAA AVVCFD  D+ +FQ M+ WVEELR NV + KLV+AIA  K+D++  R  +R +AE+FA+ +   L+ ETSAK + GV+ELF  V +RV+E RG EL
Sbjct:    7 SAAAPKS-YEFKVVLLGDRGVGKTCLVLRFIEGLYNARQQSTIGAFFLTKKIKTARGDDCKIQIWDTAGQERFRAMAPMYYRNAAAAVVCFDGTDQRTFQTMRTWVEELRANVDDKKLVIAIAITKSDLDENRAETRRKAEEFASSINDALVLETSAKNDVGVRELFATVAERVIELRGEEL 187          
BLAST of mRNA_H-paniculata_contig772.15740.1 vs. uniprot
Match: A0A7R9U6V0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6V0_9STRA)

HSP 1 Score: 196 bits (497), Expect = 1.830e-59
Identity = 95/176 (53.98%), Postives = 123/176 (69.89%), Query Frame = 0
Query:   12 EFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKKITSTDGTVCKMQIWDTAGQERFRAMAPMYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACNKTDMESQRVVSRARAEQFATDVGGLLCETSAKENWGVQELFLKVCDRVMETRGPELRGET 187
            EFKVVV+G+K VGKT LVLRFI+G F P+QQ TIGAFF +K +    G  C +Q+WDTAGQERFRA+ PMYYR A  A+VCFD+  E SF+ M+ WV+ELR N   G +V+AIA  K D+E+ RVV +     +A  +G L  ETSAK N GVQ+LF+ +  R++E +  + R ET
Sbjct:    8 EFKVVVVGEKSVGKTSLVLRFIDGCFQPQQQPTIGAFFFSKHLVLAGGAACVLQVWDTAGQERFRAITPMYYRQAMGAIVCFDVTSEASFETMQGWVKELRENTEPGSIVIAIAATKADLEAARVVDQEGPRLYAASIGALYAETSAKANVGVQDLFVTLGQRMLEKQLQKQRMET 183          
BLAST of mRNA_H-paniculata_contig772.15740.1 vs. uniprot
Match: A0A6S9BP90_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9BP90_9STRA)

HSP 1 Score: 190 bits (482), Expect = 2.710e-56
Identity = 97/187 (51.87%), Postives = 129/187 (68.98%), Query Frame = 0
Query:   12 EFKVVVLGDKGVGKTCLVLRFIEGYF--APKQQSTIGAFFLTKKITSTDGTVCKMQIWDTAGQERFRAMAPMYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACNKTDM----ESQRVVSRARAEQFATDVGGLLCETSAKENWGVQELFLKVCDRVMETRGPELRGETTGTHG 192
            EFKVV+LGD   GKT LVLRF EGY+  AP+  ST+GAFF+TK+I ++ G  CK+QIWDTAGQ +FRAMAPMYYRNAA A+VC+D+ D +SF  M++W++EL  NVP G +V+AIA  KTD+    ++  +V    A+  A  +G +  +TSAK N  VQ LF +V +RV++ R    R    GT G
Sbjct:   10 EFKVVMLGDTNAGKTSLVLRFAEGYYRDAPRS-STVGAFFITKRIQTSSGITCKIQIWDTAGQSQFRAMAPMYYRNAAAAIVCYDVTDPQSFTVMREWLDELHRNVPAGSIVIAIAATKTDLSQTADATTLVPPNEAQDVANALGAIFVDTSAKSNSNVQVLFQRVAERVLQFRENARREGMNGTPG 195          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig772.15740.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LS40_ECTSI2.630e-13385.20Rab50, RAB family GTPase n=2 Tax=Ectocarpus TaxID=... [more]
A0A7S2XTR6_9STRA9.170e-9877.05Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S3Y4J2_HETAK5.570e-9572.08Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
F0XY01_AURAN1.700e-8162.50Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S3NK22_9STRA1.130e-7964.17Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A835ZBF8_9STRA3.300e-7870.48P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S2BGJ2_9STRA1.960e-7570.99Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S3ZPM5_9STRA1.840e-7263.74Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7R9U6V0_9STRA1.830e-5953.98Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A6S9BP90_9STRA2.710e-5651.87Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 13..34
score: 50.62
coord: 36..52
score: 29.94
coord: 153..175
score: 32.09
coord: 118..131
score: 24.3
coord: 55..77
score: 49.82
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 13..178
e-value: 2.2E-69
score: 246.5
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 18..222
e-value: 8.1E-4
score: 5.9
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 15..178
e-value: 1.6E-10
score: 15.6
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 10..178
e-value: 2.6E-26
score: 103.4
NoneNo IPR availableGENE3D3.40.50.300coord: 4..190
e-value: 8.8E-59
score: 200.1
NoneNo IPR availablePANTHERPTHR24073:SF366RAS-RELATED PROTEIN RAB-5Ccoord: 10..180
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 10..180
NoneNo IPR availablePROSITEPS51419RABcoord: 8..228
score: 29.07
IPR001806Small GTPasePFAMPF00071Rascoord: 14..176
e-value: 3.7E-52
score: 176.2
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 12..168
e-value: 5.8E-24
score: 82.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 10..180

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig772contigH-paniculata_contig772:2573..5434 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig772.15740.1mRNA_H-paniculata_contig772.15740.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig772 1314..5755 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig772.15740.1 ID=prot_H-paniculata_contig772.15740.1|Name=mRNA_H-paniculata_contig772.15740.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=230bp
METGTAPRSSVEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFL
TKKITSTDGTVCKMQIWDTAGQERFRAMAPMYYRNAAVAVVCFDIMDEES
FQKMKDWVEELRTNVPEGKLVLAIACNKTDMESQRVVSRARAEQFATDVG
GLLCETSAKENWGVQELFLKVCDRVMETRGPELRGETTGTHGGAGARSGA
KHKFGLSPAAHAAGFGAEGSGESGGGCCS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase