mRNA_H-paniculata_contig772.15740.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig772.15740.1
Unique NamemRNA_H-paniculata_contig772.15740.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig772.15740.1 vs. uniprot
Match: D8LS40_ECTSI (Rab50, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS40_ECTSI)

HSP 1 Score: 386 bits (992), Expect = 5.670e-127
Identity = 190/223 (85.20%), Postives = 204/223 (91.48%), Query Frame = 1 
Query:  337 APRSSVEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKKITSTDGTVCKMQIWDTAGQERFRAMAPMYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACNKTDMESQRVVSRARAEQFATDVGGLLCETSAKENWGVQELFLKVCDRVMETRGPELRGETTGTHGGAGARSGAKHKFGLSPAAHAAGFGAEGSGESGGGCC 1005
            AP++SVEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTK+IT+TDGT+CKMQIWDTAGQERFRAMAP+YYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIAC KTDMES+RVVSRARAE FAT+VGG++CETSAKENWGV ELF +VCDR METRGPELRG+ +G   G G R   K KFGLSPAAHAAGFG +   ESGGGCC
Sbjct:    6 APKTSVEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACTKTDMESKRVVSRARAEHFATEVGGIICETSAKENWGVNELFARVCDRAMETRGPELRGQASGGAAGTGGR---KSKFGLSPAAHAAGFGGDTGAESGGGCC 225
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BLAST of mRNA_H-paniculata_contig772.15740.1 vs. uniprot
Match: A0A7S2XTR6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XTR6_9STRA)

HSP 1 Score: 291 bits (746), Expect = 7.130e-91
Identity = 141/183 (77.05%), Postives = 159/183 (86.89%), Query Frame = 1 
Query:  322 METGTAPRSSVEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKKITSTDGTVCKMQIWDTAGQERFRAMAPMYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACNKTDMESQRVVSRARAEQFATDVGGLLCETSAKENWGVQELFLKVCDRVMETRGPEL 870
            M T +   + VEFKVVVLGDKGVGKTCLVLRFIEGYF+PKQQSTIGAFFLTKKI +  G  CKMQIWDTAGQERFRAMAPMYYRNAA A+VCFDI DE+SF KMKDWVEEL+TNVPEGKLVLAIACNKTD+ES RVVSRARAEQ++  +  + CETSAKENWGV E+F KV ++V+ETRG ++
Sbjct:    1 MATSSFGGAPVEFKVVVLGDKGVGKTCLVLRFIEGYFSPKQQSTIGAFFLTKKIQTEGGVNCKMQIWDTAGQERFRAMAPMYYRNAAAAIVCFDITDEDSFTKMKDWVEELKTNVPEGKLVLAIACNKTDLESNRVVSRARAEQYSAAIKAIYCETSAKENWGVNEIFEKVSEKVIETRGLQV 183
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BLAST of mRNA_H-paniculata_contig772.15740.1 vs. uniprot
Match: A0A7S3Y4J2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y4J2_HETAK)

HSP 1 Score: 286 bits (732), Expect = 3.750e-88
Identity = 142/197 (72.08%), Postives = 158/197 (80.20%), Query Frame = 1 
Query:  352 VEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKKITSTDGTVCKMQIWDTAGQERFRAMAPMYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACNKTDMESQRVVSRARAEQFATDVGGLLCETSAKENWGVQELFLKVCDRVMETRGPELRGET------TGTHGGAGARSGAK 924
            VEFKVVVLGDKGVGK+CLVLRFIEGYF+PKQQSTIGAFFL+K I + DGT CKMQIWDTAGQERFRAMA MYYRNAA A+VCFDI DEESF KMKDWV+EL+ NVPEG+LVLAIA  KTD+E+QR VSR RAEQ+A  +G L CETSAKENWGV E+F     RV+E RGPELR          G +G  G R GA+
Sbjct:   12 VEFKVVVLGDKGVGKSCLVLRFIEGYFSPKQQSTIGAFFLSKTIEAADGTACKMQIWDTAGQERFRAMASMYYRNAAAAIVCFDITDEESFSKMKDWVQELKANVPEGRLVLAIAATKTDLEAQRAVSRGRAEQYAQSIGALCCETSAKENWGVTEVFEAAAARVLELRGPELRAAAQAQARGVGVYGAGGRRPGAQ 208
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BLAST of mRNA_H-paniculata_contig772.15740.1 vs. uniprot
Match: F0XY01_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XY01_AURAN)

HSP 1 Score: 251 bits (642), Expect = 3.940e-75
Identity = 130/208 (62.50%), Postives = 156/208 (75.00%), Query Frame = 1 
Query:  343 RSSVEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKKITSTDGTVCKMQIWDTAGQERFRAMAPMYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACNKTDMESQRVVSRARAEQFATDVGGLLCETSAKENWGVQELFLKVCDRVMETRGPELRGETTGTHGGAGARSGAKHKFGLSPAAHAAGF 966
            + + EFK+V+LGD+GVGKTCLVLRFIEG +  +QQSTIGAFFLTKKI +  G  CK+QIWDTAGQERFRAMAPMYYRNAA A+VCFD+ DE +F  MKDWVEEL+TNV +  LV+AIACNK D+++ R VSRARAEQFA  +  ++ +TSAKEN+GV ELF  V + V++ RG EL        GG G   G     GLS AA AAGF
Sbjct:    6 QKNYEFKIVLLGDRGVGKTCLVLRFIEGLYNSRQQSTIGAFFLTKKIVTAQGDACKIQIWDTAGQERFRAMAPMYYRNAAAAIVCFDVTDESTFNTMKDWVEELKTNVVDKNLVIAIACNKADLDT-RQVSRARAEQFARSISAIVLDTSAKENFGVAELFAAVSEHVIKLRGQELCSTPGAPRGGGGGPGGR----GLSLAARAAGF 208
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BLAST of mRNA_H-paniculata_contig772.15740.1 vs. uniprot
Match: A0A7S3NK22_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NK22_9STRA)

HSP 1 Score: 247 bits (630), Expect = 2.220e-73
Identity = 120/187 (64.17%), Postives = 148/187 (79.14%), Query Frame = 1 
Query:  355 EFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKKITSTDGTVCKMQIWDTAGQERFRAMAPMYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACNKTDMESQRVVSRARAEQFATDVGGLLCETSAKENWGVQELFLKVCDRVMETRGPELRGETTGTHGGAGARS 915
            EFK+V+LGD+GVGKTCLVLRFIEG +  +QQSTIGAFFLTKKI +++G  CK+QIWDTAGQERFRAMAPMYYRNAA A+VCFD+ DE +F  MKDWVEEL+TNV +  LV+AIACNK D+++ R VSRARAE FA  +  ++ +TSAKEN+GV ELF  V ++V+  RG EL  ++    G  GA S
Sbjct:   15 EFKIVLLGDRGVGKTCLVLRFIEGLYNSRQQSTIGAFFLTKKIVTSNGDACKIQIWDTAGQERFRAMAPMYYRNAAAAIVCFDVTDESTFNTMKDWVEELKTNVVDKNLVIAIACNKADLDT-RQVSRARAESFARSIDAIILDTSAKENFGVSELFTAVSEQVITLRGHELEAQSNNNRGKGGATS 200
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BLAST of mRNA_H-paniculata_contig772.15740.1 vs. uniprot
Match: A0A835ZBF8_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBF8_9STRA)

HSP 1 Score: 241 bits (615), Expect = 5.240e-72
Identity = 117/166 (70.48%), Postives = 136/166 (81.93%), Query Frame = 1 
Query:  355 EFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKKITSTDGTVCKMQIWDTAGQERFRAMAPMYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGK--LVLAIACNKTDMESQRVVSRARAEQFATDVGGLLCETSAKENWGVQELFLKVCDRV 846
            EFK+ VLGDKGVGKTCLVLRFIEGYF+  QQSTIGAFFLTK +   +G +CK+QIWDTAGQERFRAMAPMYYRNAA A+VC DI DEESF KMKDWVEE++ NVP G+  L + +A NKTD+E +RVVSRARAE+FA  +G  + ETSA+ENWGV  LF   C+RV
Sbjct:    1 EFKICVLGDKGVGKTCLVLRFIEGYFSQNQQSTIGAFFLTKSLP-VNGVLCKLQIWDTAGQERFRAMAPMYYRNAAAAIVCCDITDEESFDKMKDWVEEIKMNVPVGQQGLAIVLALNKTDLEERRVVSRARAEEFAASIGAAVVETSARENWGVARLFECACERV 165
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BLAST of mRNA_H-paniculata_contig772.15740.1 vs. uniprot
Match: A0A7S2BGJ2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BGJ2_9STRA)

HSP 1 Score: 236 bits (603), Expect = 2.610e-69
Identity = 115/162 (70.99%), Postives = 132/162 (81.48%), Query Frame = 1 
Query:  385 GVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKKITSTDGTVCKMQIWDTAGQERFRAMAPMYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACNKTDMESQRVVSRARAEQFATDVGGLLCETSAKENWGVQELFLKVCDRVMETRGPEL 870
            GVGKTCLVLRFIEG F  KQQSTIGAFFLTKK+   DG++CK+QIWDTAGQERFRAMAPMYYRNAA A+VCFDI DE SF  MKDWV+ELR N  +  L+LAIACNK D+ S RVVSR RAE FA+ +  +L +TSAKEN GV ELF KV +RV+E++G EL
Sbjct:   17 GVGKTCLVLRFIEGTFTQKQQSTIGAFFLTKKVQLEDGSMCKIQIWDTAGQERFRAMAPMYYRNAAAAIVCFDITDENSFSTMKDWVQELRRNCQDRDLILAIACNKADLSSTRVVSRERAESFASSIKAILMDTSAKENEGVNELFQKVTERVIESQGEEL 178
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BLAST of mRNA_H-paniculata_contig772.15740.1 vs. uniprot
Match: A0A7S3ZPM5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZPM5_9STRA)

HSP 1 Score: 229 bits (585), Expect = 6.490e-67
Identity = 116/185 (62.70%), Postives = 143/185 (77.30%), Query Frame = 1 
Query:  319 VMETGTAPRSSVEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKKITSTDGTVCKMQIWDTAGQERFRAMAPMYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACNKTDMESQRVVSRARAEQFATDVG-GLLCETSAKENWGVQELFLKVCDRVMETRGPEL 870
            +  +  AP+S  EFKVV+LGD+GVGKTCLVLRFIEG +  +QQSTIGAFFLTKKI +  G  CK+QIWDTAGQERFRAMAPMYYRNAA AVVCFD  D+ +FQ M+ WVEELR NV + KLV+AIA  K+D++  R  +R +AE+FA+ +   L+ ETSAK + GV+ELF  V +RV+E RG EL
Sbjct:    4 IFNSAAAPKS-YEFKVVLLGDRGVGKTCLVLRFIEGLYNARQQSTIGAFFLTKKIKTARGDDCKIQIWDTAGQERFRAMAPMYYRNAAAAVVCFDGTDQRTFQTMRTWVEELRANVDDKKLVIAIAITKSDLDENRAETRRKAEEFASSINDALVLETSAKNDVGVRELFATVAERVIELRGEEL 187
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BLAST of mRNA_H-paniculata_contig772.15740.1 vs. uniprot
Match: A0A7R9U6V0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6V0_9STRA)

HSP 1 Score: 196 bits (497), Expect = 3.630e-54
Identity = 95/176 (53.98%), Postives = 123/176 (69.89%), Query Frame = 1 
Query:  355 EFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKKITSTDGTVCKMQIWDTAGQERFRAMAPMYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACNKTDMESQRVVSRARAEQFATDVGGLLCETSAKENWGVQELFLKVCDRVMETRGPELRGET 882
            EFKVVV+G+K VGKT LVLRFI+G F P+QQ TIGAFF +K +    G  C +Q+WDTAGQERFRA+ PMYYR A  A+VCFD+  E SF+ M+ WV+ELR N   G +V+AIA  K D+E+ RVV +     +A  +G L  ETSAK N GVQ+LF+ +  R++E +  + R ET
Sbjct:    8 EFKVVVVGEKSVGKTSLVLRFIDGCFQPQQQPTIGAFFFSKHLVLAGGAACVLQVWDTAGQERFRAITPMYYRQAMGAIVCFDVTSEASFETMQGWVKELRENTEPGSIVIAIAATKADLEAARVVDQEGPRLYAASIGALYAETSAKANVGVQDLFVTLGQRMLEKQLQKQRMET 183
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BLAST of mRNA_H-paniculata_contig772.15740.1 vs. uniprot
Match: A0A6S9BP90_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9BP90_9STRA)

HSP 1 Score: 190 bits (482), Expect = 3.900e-51
Identity = 97/187 (51.87%), Postives = 129/187 (68.98%), Query Frame = 1 
Query:  355 EFKVVVLGDKGVGKTCLVLRFIEGYF--APKQQSTIGAFFLTKKITSTDGTVCKMQIWDTAGQERFRAMAPMYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACNKTDM----ESQRVVSRARAEQFATDVGGLLCETSAKENWGVQELFLKVCDRVMETRGPELRGETTGTHG 897
            EFKVV+LGD   GKT LVLRF EGY+  AP+  ST+GAFF+TK+I ++ G  CK+QIWDTAGQ +FRAMAPMYYRNAA A+VC+D+ D +SF  M++W++EL  NVP G +V+AIA  KTD+    ++  +V    A+  A  +G +  +TSAK N  VQ LF +V +RV++ R    R    GT G
Sbjct:   10 EFKVVMLGDTNAGKTSLVLRFAEGYYRDAPRS-STVGAFFITKRIQTSSGITCKIQIWDTAGQSQFRAMAPMYYRNAAAAIVCYDVTDPQSFTVMREWLDELHRNVPAGSIVIAIAATKTDLSQTADATTLVPPNEAQDVANALGAIFVDTSAKSNSNVQVLFQRVAERVLQFRENARREGMNGTPG 195
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig772.15740.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LS40_ECTSI5.670e-12785.20Rab50, RAB family GTPase n=2 Tax=Ectocarpus TaxID=... [more]
A0A7S2XTR6_9STRA7.130e-9177.05Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S3Y4J2_HETAK3.750e-8872.08Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
F0XY01_AURAN3.940e-7562.50Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S3NK22_9STRA2.220e-7364.17Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A835ZBF8_9STRA5.240e-7270.48P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S2BGJ2_9STRA2.610e-6970.99Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S3ZPM5_9STRA6.490e-6762.70Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7R9U6V0_9STRA3.630e-5453.98Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A6S9BP90_9STRA3.900e-5151.87Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig772contigH-paniculata_contig772:1314..5755 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score387.1
Seed ortholog evalue5.7e-105
Seed eggNOG ortholog2880.D8LS40
KEGG koko:K07893,ko:K07976
Hectar predicted targeting categoryother localisation
EggNOG free text desc.GTPase activity
EggNOG OGsKOG0092@1,KOG0092@2759
Ec32 ortholog descriptionRab50, RAB family GTPase
Ec32 orthologEc-12_004900.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04031,ko04131,ko04147
Exons4
Model size2270
Cds size690
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig772.15740.1prot_H-paniculata_contig772.15740.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig772 2573..5434 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930957.43121-UTR-H-paniculata_contig772:1313..25721622930957.43121-UTR-H-paniculata_contig772:1313..2572Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig772 1314..2572 -
1691481527.2509823-UTR-H-paniculata_contig772:1313..25721691481527.2509823-UTR-H-paniculata_contig772:1313..2572Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig772 1314..2572 -
1622930957.5304706-UTR-H-paniculata_contig772:5434..57551622930957.5304706-UTR-H-paniculata_contig772:5434..5755Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig772 5435..5755 -
1691481527.3006961-UTR-H-paniculata_contig772:5434..57551691481527.3006961-UTR-H-paniculata_contig772:5434..5755Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig772 5435..5755 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930957.4639695-CDS-H-paniculata_contig772:2572..28781622930957.4639695-CDS-H-paniculata_contig772:2572..2878Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig772 2573..2878 -
1691481527.2666786-CDS-H-paniculata_contig772:2572..28781691481527.2666786-CDS-H-paniculata_contig772:2572..2878Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig772 2573..2878 -
1622930957.4767613-CDS-H-paniculata_contig772:3374..35941622930957.4767613-CDS-H-paniculata_contig772:3374..3594Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig772 3375..3594 -
1691481527.2747602-CDS-H-paniculata_contig772:3374..35941691481527.2747602-CDS-H-paniculata_contig772:3374..3594Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig772 3375..3594 -
1622930957.4938145-CDS-H-paniculata_contig772:3974..40961622930957.4938145-CDS-H-paniculata_contig772:3974..4096Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig772 3975..4096 -
1691481527.2824287-CDS-H-paniculata_contig772:3974..40961691481527.2824287-CDS-H-paniculata_contig772:3974..4096Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig772 3975..4096 -
1622930957.5121942-CDS-H-paniculata_contig772:5392..54341622930957.5121942-CDS-H-paniculata_contig772:5392..5434Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig772 5393..5434 -
1691481527.290207-CDS-H-paniculata_contig772:5392..54341691481527.290207-CDS-H-paniculata_contig772:5392..5434Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig772 5393..5434 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig772.15740.1

>prot_H-paniculata_contig772.15740.1 ID=prot_H-paniculata_contig772.15740.1|Name=mRNA_H-paniculata_contig772.15740.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=230bp
METGTAPRSSVEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFL
TKKITSTDGTVCKMQIWDTAGQERFRAMAPMYYRNAAVAVVCFDIMDEES
FQKMKDWVEELRTNVPEGKLVLAIACNKTDMESQRVVSRARAEQFATDVG
GLLCETSAKENWGVQELFLKVCDRVMETRGPELRGETTGTHGGAGARSGA
KHKFGLSPAAHAAGFGAEGSGESGGGCCS*
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mRNA from alignment at H-paniculata_contig772:1314..5755-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig772.15740.1 ID=mRNA_H-paniculata_contig772.15740.1|Name=mRNA_H-paniculata_contig772.15740.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4442bp|location=Sequence derived from alignment at H-paniculata_contig772:1314..5755- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGAGTTGCATACCAACTCCCTTTGCTCCATACGTCATGTACCACAGGTT
TTGGGTGTCTTCTGCGGTGCTTCTTTCTTGAGTTTTCATAGCTCCAAGAG
CCATAGTAACTAGAGCACTAGTCTGCTGCTCAGTCAGTCTAGTATACTGC
TCTCCTAGTGGTGTTCATTGCGCAATACACCTTGAGCACAGTACATATTA
CACCACAAAAAGCAAAGAAGGAAGTCTTCCTCTTGTCAGCGGCAGGAGGT
CTTCCTGCGACTAGCACGATTTGGGTGAAAAAGGGCGAGAGGCCGCTTCC
AGGCGAGTGGGGGCGGGCGTGATGGAGACGGGCACGGCTCCAAGGAGCTC
GGTAGAGTTCAAGGTGAGAGGTAGAGGCAGGTTGAGGCATGATTTCAGGT
GGTTTGCCCTTTTGCATGGGGTGAAAGTGGTTTACCTAGCACAGGCATCA
CTTCTAGACAACACAGTAGTGTCGTTCCTGGTGTGTAGAAGTACGGTGCA
CTCTGTGCATCGGAGTTACGGACTACCAGCTATTGCAGTACAGTAGTGAA
GGGTGAATCGTTGATTTTCCTTCCTTTCCGTGCTTGGATTTGCGAGGCAT
CACACGATATATGACATGGCTAGAACTAGGGTGCAGACTTCATTTCATGA
TAGTGGCTCCTTTGCAGACCAACACGTGTAATCTCTCCCCGCTGTCAACT
TGGAACCCTTAGCTTATACTTGTAGTTACATAAACTGGAGGCTTTTCGCA
ACTTGCCATTTTTGGGCCGAATTTAGAATTTACCAACACGTTCTTTCCAT
CTGGAAAAAAGCTTACGCCTATTGAAGATTGGATTTACAGTCCGTCCGCA
AATTGGCCTTTCATACCACTCCCTACCACTGATTAAATGGGTGTAATATT
CGTCTGTCTGTAAATAGTAAAATAGTGTAAATCTACACTCAGCACAAACC
GTACCAAACTGACTGCAAGACAGCCTCACGGTTTGTAGAGCTGTTGAAGA
GTGACGGAGTCGGGTGTGATTATTGCGACTACACAACATGTTGCTTTATC
TTTCTTTCGGGTGCAACCTACAGTTCCGCCTTTGGTGCCGCAGGCCATTT
CGCAACAAAAAAATGCGTCTGGCAATAAATATCGAGGGCTGTAGTCGTTG
AGTAGAGAAACATGCCGACTCCCTGACTGCTGGATATAACGTCTACGTTG
GATCGGCTGTCTAAACGACGGCAGCCCCCTACCTATCCATAGACGTCGTT
CTCCCCTGGATTTTACGCAGGGATTATATGAGGGAACTGGCACTAAAGCC
ATATATTATAAGCCGGAATCAGAAGTCAAAATCGGGGGCGATTCTAAACT
ATCACAACATAATTGGTACCGTGCAGATAGATTCCACATCCTCGTGACTC
GCCTCACAGAACCCAGGCTGTTTGTGCTTGTTAACTCCAAACAGAAACAA
CGCTAAAAAGTGAAGAACAAGTTTTTTTTGGTGCCTGCTGCCGCTACGGA
TAGTGCATTAAATAAAACATGAAAACGCTGTGAATGTCAACGTCTAGCTC
GTCCAGCGTTGCAAGCTAACCTCCCAGTGTTGTATATATGATGGGCTTCC
TGTTACACTACTGTAACTGTACGATACGCATCAATGTGTCATGTCGACTT
CTGGAGCAGGTGGTCGTGCTGGGAGACAAGGGAGTAGGCAAGACGTGTCT
CGTGCTGCGATTCATCGAGGGCTACTTCGCCCCCAAGCAGCAGAGCACTA
TCGGGGCGTTTTTCCTCACAAAGAAAATCACGTGAGTCAAGGTATTGCGT
GGAGCAGCTTTCCCGAAGCAAATTCTGAGCAAGTGACTGGATGGGTGAAT
GAATTTTCGACTTGACACCCCTAGACCGGAAGTCGGCGTATGCCGCACGG
AGTCTTCGTGTTCGTCAGCCTTTTCGCCTAGACTGCAGAAAGGCTGAAAA
GTGCGCATAAGTACATACCAAGCGGGTCTCTTAATCGGGTAAAAAATGTC
TCAACAATAGTTCCAGGGTAACTTGCAAGTCAAAGGTGTTCATATCAGAT
GTTTCGCAAATTATGGTGATAATACTGACGCTTGAAGAAAAAGTCGCAAG
TATCAGGTTTGCTTTCCGCGCTCTGCTCGTTGACTTCCGCACCATTGCCG
CCGATCCATAGATCTACTGATGGTACTGTGTGCAAGATGCAAATATGGGA
CACGGCGGGGCAGGAGCGATTTCGCGCCATGGCTCCGATGTACTACCGCA
ACGCGGCAGTAGCTGTCGTTTGTTTTGATATAATGGATGAAGAGTCGTTC
CAAAAAATGAAGGACTGGGTGGAGGAGCTGCGAACGAACGTACCGGAGGG
CAAGCTTGTACTCGCGATTGCTTGTAACAAGGTAAGGTGATGTTTTTTTA
CTCCCCTAAGCGACGAGAGTTTTCAGCATGCAGAGAATAGCGGAAACTCA
TGGGCGTGTTTCGATTGGGGGAATGGGGTTATTCAAATGTACACATGTAC
ACCCGTCCGCCTGATAAGCTGAAGTGTCAGCTGCTGCGGTCTTGTAGTCA
ACATATTTGCTCACAATATCGGGCTATGATTTAGCATTGTGGGCATTCGA
GGTATCAAAAGAATGCGGGAGCATGGAGGGGTGATTTTCGGCTGATAAAT
CATACTCCCCCGCCCTCCGCCCCCCACGCGCGCGCTTAAACCGTAGAGGA
AAGGTTGTACCAAGTTTGATGTCCTCTAAATGTTGCACATATTTATGCAG
TATGTGCAACATCAATCTCATAAGAGAACAAAAATATTATTCTGATTAGT
CACTTGTTTTCTTTCCATCTCCTTGCTATGTGTGAACCCAAACACAAACC
TTCACCGTACTAATATTCCACCACCAGACGGATATGGAGAGCCAGCGGGT
AGTGTCGCGGGCGCGGGCGGAGCAGTTCGCAACTGACGTAGGGGGCCTCC
TGTGCGAGACCAGCGCCAAGGAGAACTGGGGCGTGCAGGAGCTATTCTTG
AAAGTTTGCGATAGGGTAATGGAGACAAGGGGGCCCGAGCTGAGAGGGGA
AACAACGGGGACACACGGCGGAGCGGGGGCACGGTCGGGAGCGAAACACA
AATTCGGGCTCTCGCCCGCAGCACATGCCGCGGGCTTCGGCGCAGAAGGT
AGTGGAGAAAGTGGGGGCGGATGCTGCAGCTAGTAGCCCCGTGAAACATG
AGTGGAATGGTGACTGGTGGATGGTGGTGGTGATGATGGTCATGGTGGTG
GCGGAAGATCGGTGGACAAATCTTATTTTTTGGTATTGAAACAAAGCGGA
GTTCTCGCTCGCTTTTTGTCCCGCCGGAAGAATTGGCGCGGGCGCGGGCT
ACATTGTAAGCCACCCCCATCACCACCACTGTCATCACTACGCGTGCGTG
GCATGTGGGAAAAGTGCGACAGGTCCAGGCGTCGTGTCCATGCGGGAGAG
GGGGGCGGGAGTACGGGGCAGTACCCGCCACACGATAAGACCAGGAAGGA
GTCTGAGTGTTGAAGTACTGTTTCACTGTTACAGTTTTCACTTTTCCTCC
CTATAGGCGGCCAACTTTTCAGTTCTCGTTTTTTTTTTAATAAGAATTGT
TGGTCATGTTTCTGGACAATTCCCAAAACCCCAATTTTCCGCCAAGATTT
GCACCAAAATGAGTGCAAATTCACGAGGCAAAATCAAGTTTTTGCCAGCT
ATGAAAAAGCAAGGTGTGCAAATATGGCGGCCTATAGGGGGAGGGATGCG
CGTGTATGATGTTCGTCCCGTTCTTATGAGTCTTCATCGTGTTTCGTGTT
CTTTCTCTTGTCCACTTTTCCCTCTTGTTGGCAGCGTTGGATCGTTTCTT
CTCCGCTCGCGTTGGACCCTGTGTAATCCCCCGTATCCTTTGCCACAGAT
ATGGCTTGTTTTTCTTCCCAACTCTTGCCATACAAACTTGCGCGTTTTTG
GTGCCTTTTTTGTCGTTTTGTTTGTACCATGATAGTGCATATGCAATCAG
GGCTATTTTTCTGTATCACTCAACGACGTACAGAATAAATGAAAAAGATG
TTTTGTCTTCGCTATCGTAATTTAGTTTTTTCCCGCAGTAGGTCTTGTGA
GCGTGTTTTTTCCTTTAACGTCTATTCTTCATTTTGTATCATCCTTTTGT
CTTCTGCTTTTAAGTGGAGTTACTCCTTGGCCTGTCTATATTTTGCTGAG
CAACCGACAACTCATGTCTTCTATCAGACCCGAGTGGGGCGTCTGTACTT
CTGTGTGCTGTGCTTTGTAATGACACAACGTTTTTGTCCGCGTGTTATTT
TAAACGACCGCCATCTTGAGGTGCTTCTTACCGACCCAATAGTCTCTAGC
GTCTGTGCTTGAGGCATCCGGTGAAGGAGGCGGGATGTCAGCGAGACCAT
GCCACCTTGATCCAGCACTCTCTGTGCGTTCTATTTGGGGCG
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Coding sequence (CDS) from alignment at H-paniculata_contig772:1314..5755-

>mRNA_H-paniculata_contig772.15740.1 ID=mRNA_H-paniculata_contig772.15740.1|Name=mRNA_H-paniculata_contig772.15740.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1380bp|location=Sequence derived from alignment at H-paniculata_contig772:1314..5755- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAGACGGGCACGGCTCCAAGGAGCTCGGTAGAGTTCAAGATGGAGAC
GGGCACGGCTCCAAGGAGCTCGGTAGAGTTCAAGGTGGTCGTGCTGGGAG
ACAAGGGAGTAGGCAAGACGTGTCTCGTGCTGCGATTCATCGAGGGCTAC
TTCGCCCCCAAGCAGCAGAGCACTATCGGGGCGTTTTTCCTCACAAAGAA
AATCACGTGGTCGTGCTGGGAGACAAGGGAGTAGGCAAGACGTGTCTCGT
GCTGCGATTCATCGAGGGCTACTTCGCCCCCAAGCAGCAGAGCACTATCG
GGGCGTTTTTCCTCACAAAGAAAATCACATCTACTGATGGTACTGTGTGC
AAGATGCAAATATGGGACACGGCGGGGCAGGAGCGATTTCGCGCCATGGC
TCCGATGTACTACCGCAACGCGGCAGTAGCTGTCGTTTGTTTTGATATAA
TGGATGAAGAGTCGTTCCAAAAAATGAAGGACTGGGTGGAGGAGCTGCGA
ACGAACGTACCGGAGGGCAAGCTTGTACTCGCGATTGCTTGTAACAAGAT
CTACTGATGGTACTGTGTGCAAGATGCAAATATGGGACACGGCGGGGCAG
GAGCGATTTCGCGCCATGGCTCCGATGTACTACCGCAACGCGGCAGTAGC
TGTCGTTTGTTTTGATATAATGGATGAAGAGTCGTTCCAAAAAATGAAGG
ACTGGGTGGAGGAGCTGCGAACGAACGTACCGGAGGGCAAGCTTGTACTC
GCGATTGCTTGTAACAAGACGGATATGGAGAGCCAGCGGGTAGTGTCGCG
GGCGCGGGCGGAGCAGTTCGCAACTGACGTAGGGGGCCTCCTGTGCGAGA
CCAGCGCCAAGGAGAACTGGGGCGTGCAGGAGCTATTCTTGAAAGTTTGC
GATAGGGTAATGGAGACAAGGGGGCCCGAGCTGAGAGGGGAAACAACGGG
GACACACGGCGGAGCGGGGGCACGGTCGGGAGCGAAACACAAATTCGGGC
TCTCGCCCGCAGCACATGCCGCGGGCTTCGGCGCAGAAGGTAGTGGAGAA
AGTGGGGGCGGATGCTGCAGCTAGACGGATATGGAGAGCCAGCGGGTAGT
GTCGCGGGCGCGGGCGGAGCAGTTCGCAACTGACGTAGGGGGCCTCCTGT
GCGAGACCAGCGCCAAGGAGAACTGGGGCGTGCAGGAGCTATTCTTGAAA
GTTTGCGATAGGGTAATGGAGACAAGGGGGCCCGAGCTGAGAGGGGAAAC
AACGGGGACACACGGCGGAGCGGGGGCACGGTCGGGAGCGAAACACAAAT
TCGGGCTCTCGCCCGCAGCACATGCCGCGGGCTTCGGCGCAGAAGGTAGT
GGAGAAAGTGGGGGCGGATGCTGCAGCTAG
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