prot_H-paniculata_contig77199.15738.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig77199.15738.1
Unique Nameprot_H-paniculata_contig77199.15738.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length72
Homology
BLAST of mRNA_H-paniculata_contig77199.15738.1 vs. uniprot
Match: D7G4Q8_ECTSI (Geranylgeranyltransferase type 1 beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Q8_ECTSI)

HSP 1 Score: 77.8 bits (190), Expect = 2.760e-15
Identity = 36/58 (62.07%), Postives = 40/58 (68.97%), Query Frame = 0
Query:    1 QECGFQGRVNKAIDTCCSFWVGATLILLGEFHLVDTTRARPFHPSCQNRVIGKWSCQP 58
            Q  GFQGR NK  D+CCSFWVGATL LL    LVD  RAR FH SCQNR+ G ++  P
Sbjct:  238 QGVGFQGRPNKPEDSCCSFWVGATLALLDGLDLVDDGRARQFHVSCQNRICGGFAKAP 295          
BLAST of mRNA_H-paniculata_contig77199.15738.1 vs. uniprot
Match: A0A6H5KFN4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFN4_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 1.770e-13
Identity = 33/55 (60.00%), Postives = 37/55 (67.27%), Query Frame = 0
Query:    4 GFQGRVNKAIDTCCSFWVGATLILLGEFHLVDTTRARPFHPSCQNRVIGKWSCQP 58
            GFQGR NK  D+CCSFWVGATL LL    LVD  RAR FH SC N + G ++  P
Sbjct:  346 GFQGRPNKPEDSCCSFWVGATLALLDGLDLVDEARARQFHVSCHNPICGGFAKAP 400          
BLAST of mRNA_H-paniculata_contig77199.15738.1 vs. uniprot
Match: A0A6B2L8R2_9EUKA (Geranylgeranyl transferase type-1 subunit beta n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L8R2_9EUKA)

HSP 1 Score: 68.6 bits (166), Expect = 6.260e-12
Identity = 34/61 (55.74%), Postives = 39/61 (63.93%), Query Frame = 0
Query:    1 QECGFQGRVNKAIDTCCSFWVGATLILLGEFHLVDTTRARPFHPSCQNRVIG--KWSCQPA 59
            QE GF GR NK  DTC SFWVGA+L +LG +HLVD    R +  SCQ +  G  KWS Q A
Sbjct:  232 QEQGFNGRPNKIQDTCYSFWVGASLKILGAYHLVDEQNTRKYTLSCQKKNGGFAKWSSQSA 292          
BLAST of mRNA_H-paniculata_contig77199.15738.1 vs. uniprot
Match: A0A7J7KDD4_BUGNE (Geranylgeranyl transferase type-1 subunit beta n=1 Tax=Bugula neritina TaxID=10212 RepID=A0A7J7KDD4_BUGNE)

HSP 1 Score: 67.4 bits (163), Expect = 1.920e-11
Identity = 32/58 (55.17%), Postives = 39/58 (67.24%), Query Frame = 0
Query:    1 QECGFQGRVNKAIDTCCSFWVGATLILLGEFHLVDTTRARPFHPSCQNRVIG---KWS 55
            QE GFQGR NK IDTC SFW+GATL +L  F  VDT+  R +  S Q+ V+G   KW+
Sbjct:  243 QESGFQGRPNKPIDTCYSFWIGATLRILDSFQFVDTSANRKWLLSVQDNVVGGFGKWT 300          
BLAST of mRNA_H-paniculata_contig77199.15738.1 vs. uniprot
Match: UPI0014257D88 (geranylgeranyl transferase type-1 subunit beta-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014257D88)

HSP 1 Score: 65.9 bits (159), Expect = 6.160e-11
Identity = 32/58 (55.17%), Postives = 38/58 (65.52%), Query Frame = 0
Query:    1 QECGFQGRVNKAIDTCCSFWVGATLILLGEFHLVDTTRARPFHPSCQNRVIGKWSCQP 58
            Q+ GFQGR NK +DTC SFWVGATL LL  FHLVD    R +  S Q+  +G +S  P
Sbjct:  247 QQSGFQGRPNKPVDTCYSFWVGATLKLLDMFHLVDFNCNRTYILSTQDETMGGFSKWP 304          
BLAST of mRNA_H-paniculata_contig77199.15738.1 vs. uniprot
Match: UPI001ED88C98 (geranylgeranyl transferase type-1 subunit beta n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED88C98)

HSP 1 Score: 65.5 bits (158), Expect = 8.440e-11
Identity = 31/55 (56.36%), Postives = 38/55 (69.09%), Query Frame = 0
Query:    1 QECGFQGRVNKAIDTCCSFWVGATLILLGEFHLVDTTRARPFHPSCQNRVIGKWS 55
            Q  GFQGR NK +DTC SFWVGATL LLG FHLVD  + + +  S Q+ + G +S
Sbjct:  250 QISGFQGRPNKPVDTCYSFWVGATLKLLGIFHLVDYQQNKDYLLSTQDPITGGFS 304          
BLAST of mRNA_H-paniculata_contig77199.15738.1 vs. uniprot
Match: A0A4D5RUZ1_IXOSC (Protein geranylgeranyltransferase type i beta subunit n=1 Tax=Ixodes scapularis TaxID=6945 RepID=A0A4D5RUZ1_IXOSC)

HSP 1 Score: 64.3 bits (155), Expect = 9.330e-11
Identity = 31/58 (53.45%), Postives = 38/58 (65.52%), Query Frame = 0
Query:    1 QECGFQGRVNKAIDTCCSFWVGATLILLGEFHLVDTTRARPFHPSCQNRVIGKWSCQP 58
            Q+ GFQGR NK IDTC SFWVGA L LLG F  V++ R   F  S Q++ +G +S  P
Sbjct:   85 QQSGFQGRPNKPIDTCYSFWVGAALELLGAFKFVESGRNLEFLDSTQDQFVGGFSKWP 142          
BLAST of mRNA_H-paniculata_contig77199.15738.1 vs. uniprot
Match: UPI0001CBA22C (geranylgeranyl transferase type-1 subunit beta-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CBA22C)

HSP 1 Score: 65.1 bits (157), Expect = 1.160e-10
Identity = 33/62 (53.23%), Postives = 39/62 (62.90%), Query Frame = 0
Query:    1 QECGFQGRVNKAIDTCCSFWVGATLILLGEFHLVDTTRARPFHPSCQNRVIG---KW-SCQP 58
            Q+ GFQGR NK +DTC SFWVGATL LLG F  +D +  R +  S Q+ V G   KW  C P
Sbjct:  247 QQSGFQGRPNKPVDTCYSFWVGATLKLLGAFEQIDYSSNRNYILSTQDNVTGGFSKWPDCHP 308          
BLAST of mRNA_H-paniculata_contig77199.15738.1 vs. uniprot
Match: A0A6P9AFI5_THRPL (Geranylgeranyl transferase type-1 subunit beta n=1 Tax=Thrips palmi TaxID=161013 RepID=A0A6P9AFI5_THRPL)

HSP 1 Score: 64.7 bits (156), Expect = 1.570e-10
Identity = 27/55 (49.09%), Postives = 37/55 (67.27%), Query Frame = 0
Query:    1 QECGFQGRVNKAIDTCCSFWVGATLILLGEFHLVDTTRARPFHPSCQNRVIGKWS 55
            QE GFQGR NK +DTC SFW+GATL ++  + L+D    R F  + Q+ +IG +S
Sbjct:  243 QESGFQGRPNKPVDTCYSFWIGATLKIIDSYELIDKAENRNFIMATQSNIIGGFS 297          
BLAST of mRNA_H-paniculata_contig77199.15738.1 vs. uniprot
Match: A0A8K0P2M1_LADFU (Uncharacterized protein n=1 Tax=Ladona fulva TaxID=123851 RepID=A0A8K0P2M1_LADFU)

HSP 1 Score: 64.7 bits (156), Expect = 1.590e-10
Identity = 30/55 (54.55%), Postives = 37/55 (67.27%), Query Frame = 0
Query:    1 QECGFQGRVNKAIDTCCSFWVGATLILLGEFHLVDTTRARPFHPSCQNRVIGKWS 55
            Q  GFQGR NK +DTC SFWVGATL LLG +HL+D  + +    S Q+  IG +S
Sbjct:  249 QMSGFQGRPNKPVDTCYSFWVGATLKLLGVYHLIDYDQNKELLLSSQDSTIGGFS 303          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig77199.15738.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4Q8_ECTSI2.760e-1562.07Geranylgeranyltransferase type 1 beta n=1 Tax=Ecto... [more]
A0A6H5KFN4_9PHAE1.770e-1360.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6B2L8R2_9EUKA6.260e-1255.74Geranylgeranyl transferase type-1 subunit beta n=1... [more]
A0A7J7KDD4_BUGNE1.920e-1155.17Geranylgeranyl transferase type-1 subunit beta n=1... [more]
UPI0014257D886.160e-1155.17geranylgeranyl transferase type-1 subunit beta-lik... [more]
UPI001ED88C988.440e-1156.36geranylgeranyl transferase type-1 subunit beta n=1... [more]
A0A4D5RUZ1_IXOSC9.330e-1153.45Protein geranylgeranyltransferase type i beta subu... [more]
UPI0001CBA22C1.160e-1053.23geranylgeranyl transferase type-1 subunit beta-lik... [more]
A0A6P9AFI5_THRPL1.570e-1049.09Geranylgeranyl transferase type-1 subunit beta n=1... [more]
A0A8K0P2M1_LADFU1.590e-1054.55Uncharacterized protein n=1 Tax=Ladona fulva TaxID... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.50.10.20coord: 1..63
e-value: 1.3E-14
score: 55.9
NoneNo IPR availablePANTHERPTHR11774:SF4GERANYLGERANYL TRANSFERASE TYPE-1 SUBUNIT BETAcoord: 3..55
NoneNo IPR availablePANTHERPTHR11774GERANYLGERANYL TRANSFERASE TYPE BETA SUBUNITcoord: 3..55
IPR008930Terpenoid cyclases/protein prenyltransferase alpha-alpha toroidSUPERFAMILY48239Terpenoid cyclases/Protein prenyltransferasescoord: 2..52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig77199contigH-paniculata_contig77199:251..466 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig77199.15738.1mRNA_H-paniculata_contig77199.15738.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig77199 251..466 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig77199.15738.1 ID=prot_H-paniculata_contig77199.15738.1|Name=mRNA_H-paniculata_contig77199.15738.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=72bp
QECGFQGRVNKAIDTCCSFWVGATLILLGEFHLVDTTRARPFHPSCQNRV
IGKWSCQPARCTAVRNIAPRPE
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008930Terpenoid_cyclase/PrenylTrfase