prot_H-paniculata_contig77191.15737.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig77191.15737.1
Unique Nameprot_H-paniculata_contig77191.15737.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length75
Homology
BLAST of mRNA_H-paniculata_contig77191.15737.1 vs. uniprot
Match: A0A061F8M9_THECC (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 n=1 Tax=Theobroma cacao TaxID=3641 RepID=A0A061F8M9_THECC)

HSP 1 Score: 70.1 bits (170), Expect = 2.530e-12
Identity = 34/73 (46.58%), Postives = 43/73 (58.90%), Query Frame = 0
Query:    1 MQGLVDNGAWTQVERPKNKLVVGTMMIYKRKIGEDGKVEKYKCRLVAHGNRQIKGIHYQEASSPAPTAASTKM 73
            ++ L DNG W+ V+ P N   VG   +YK K+  DGKVE+YK RLVA G  QI+G  YQE  SP       +M
Sbjct:  180 LKALEDNGTWSIVQLPSNYHAVGCKWVYKVKLNADGKVERYKARLVAKGYNQIEGFDYQETFSPVARQTIVRM 252          
BLAST of mRNA_H-paniculata_contig77191.15737.1 vs. uniprot
Match: UPI0008494023 (uncharacterized mitochondrial protein AtMg00810 n=1 Tax=Theobroma cacao TaxID=3641 RepID=UPI0008494023)

HSP 1 Score: 68.9 bits (167), Expect = 6.190e-12
Identity = 33/73 (45.21%), Postives = 44/73 (60.27%), Query Frame = 0
Query:    1 MQGLVDNGAWTQVERPKNKLVVGTMMIYKRKIGEDGKVEKYKCRLVAHGNRQIKGIHYQEASSPAPTAASTKM 73
            ++ L DNG W+ V+ P N   VG   +YK K+  DGKVE+YK RLVA G  QI+G  YQ+  SP     + +M
Sbjct:    5 LKALEDNGTWSIVQLPSNCHAVGCKWVYKVKLNADGKVERYKARLVAKGYNQIEGFDYQKTFSPVVRQTTVRM 77          
BLAST of mRNA_H-paniculata_contig77191.15737.1 vs. uniprot
Match: A0A2I0HGX5_PUNGR (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Punica granatum TaxID=22663 RepID=A0A2I0HGX5_PUNGR)

HSP 1 Score: 62.4 bits (150), Expect = 2.610e-11
Identity = 28/59 (47.46%), Postives = 40/59 (67.80%), Query Frame = 0
Query:    6 DNGAWTQVERPKNKLVVGTMMIYKRKIGEDGKVEKYKCRLVAHGNRQIKGIHYQEASSP 64
            +N  W  V+ P+  +++G  +++KRKIG DGKVE YK RLVA G RQ + + Y+E  SP
Sbjct:   10 ENQVWDLVDLPEGIVLIGNELVFKRKIGADGKVETYKARLVAKGYRQRQEVDYEETFSP 68          
BLAST of mRNA_H-paniculata_contig77191.15737.1 vs. uniprot
Match: A0A2P6SKU2_ROSCH (Putative RNA-directed DNA polymerase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6SKU2_ROSCH)

HSP 1 Score: 65.9 bits (159), Expect = 7.980e-11
Identity = 31/75 (41.33%), Postives = 44/75 (58.67%), Query Frame = 0
Query:    1 MQGLVDNGAWTQVERPKNKLVVGTMMIYKRKIGEDGKVEKYKCRLVAHGNRQIKGIHYQEASSPAPTAASTKMVL 75
            +  +  NG WT V++P N   +G   ++K K   DGKVE+YK RLVA G  Q +GI Y E  SP  T  + ++V+
Sbjct:  525 LHSMAQNGVWTLVDKPCNAKPIGCKWVFKTKKDADGKVERYKARLVAKGYNQKEGIDYNETFSPVSTKDAFRVVM 599          
BLAST of mRNA_H-paniculata_contig77191.15737.1 vs. uniprot
Match: UPI001CB79F24 (hypothetical protein n=1 Tax=Blastococcus sp. CPCC 205250 TaxID=2732513 RepID=UPI001CB79F24)

HSP 1 Score: 63.2 bits (152), Expect = 2.150e-10
Identity = 31/75 (41.33%), Postives = 43/75 (57.33%), Query Frame = 0
Query:    1 MQGLVDNGAWTQVERPKNKLVVGTMMIYKRKIGEDGKVEKYKCRLVAHGNRQIKGIHYQEASSPAPTAASTKMVL 75
            M+ L  N  W  V+ PK++  +G   ++KRK   +GK+ KYK RLVA G  QI+G+ Y E  SP     S + VL
Sbjct:  101 MKSLDQNHTWNLVKLPKDRKAIGCKWVFKRKQDAEGKIGKYKARLVAKGYAQIEGVDYAEIFSPVAKLTSIRTVL 175          
BLAST of mRNA_H-paniculata_contig77191.15737.1 vs. uniprot
Match: A0A1X7TFD5_AMPQE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7TFD5_AMPQE)

HSP 1 Score: 60.5 bits (145), Expect = 2.910e-10
Identity = 28/51 (54.90%), Postives = 37/51 (72.55%), Query Frame = 0
Query:    2 QGLVDNGAWTQVERPKNKLVVGTMMIYKRKIGEDGKVEKYKCRLVAHGNRQ 52
            + L +N  W  VE PK++ VVG+  ++KRKIGE+GKVE+YK RLVA G  Q
Sbjct:    6 ESLEENQVWDLVELPKDRRVVGSKWVFKRKIGENGKVERYKARLVAQGYSQ 56          
BLAST of mRNA_H-paniculata_contig77191.15737.1 vs. uniprot
Match: A0A151T9B6_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151T9B6_CAJCA)

HSP 1 Score: 63.9 bits (154), Expect = 3.790e-10
Identity = 29/75 (38.67%), Postives = 43/75 (57.33%), Query Frame = 0
Query:    1 MQGLVDNGAWTQVERPKNKLVVGTMMIYKRKIGEDGKVEKYKCRLVAHGNRQIKGIHYQEASSPAPTAASTKMVL 75
            ++ +  NG W  ++RPK   VVG   +YK K+ E GKV+K+K RLV  G  Q  GI Y E  +P     + ++V+
Sbjct:  809 IEAIEKNGTWELIDRPKGAKVVGVKWVYKTKLNEKGKVDKFKARLVVKGYAQQYGIDYTEVFAPVACMETVRLVI 883          
BLAST of mRNA_H-paniculata_contig77191.15737.1 vs. uniprot
Match: A0A151T5R4_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Cajanus cajan TaxID=3821 RepID=A0A151T5R4_CAJCA)

HSP 1 Score: 63.9 bits (154), Expect = 3.830e-10
Identity = 31/75 (41.33%), Postives = 44/75 (58.67%), Query Frame = 0
Query:    1 MQGLVDNGAWTQVERPKNKLVVGTMMIYKRKIGEDGKVEKYKCRLVAHGNRQIKGIHYQEASSPAPTAASTKMVL 75
            M  L +N  W  V+ PK K VVG   I+  K+G DGK+++YK RLVA G  Q  GI Y+E  +P     S ++++
Sbjct:  872 MAALEENKTWDIVKLPKEKKVVGCRWIFTTKMGADGKIDRYKARLVAQGYTQTHGIDYEETFAPVAKLNSIRILI 946          
BLAST of mRNA_H-paniculata_contig77191.15737.1 vs. uniprot
Match: UPI00090104FD (uncharacterized protein LOC104779870 isoform X1 n=1 Tax=Camelina sativa TaxID=90675 RepID=UPI00090104FD)

HSP 1 Score: 63.5 bits (153), Expect = 5.080e-10
Identity = 29/72 (40.28%), Postives = 43/72 (59.72%), Query Frame = 0
Query:    4 LVDNGAWTQVERPKNKLVVGTMMIYKRKIGEDGKVEKYKCRLVAHGNRQIKGIHYQEASSPAPTAASTKMVL 75
            L+  G W  V RPKN  ++ +M +YK K   +G++ +YK RLVA+GN Q+ G+   E  SP    A+ + VL
Sbjct:  431 LIKMGTWCLVPRPKNTNIIRSMWLYKHKFDSNGRLSRYKARLVANGNSQLPGVDCDETFSPVVKPATIRAVL 502          
BLAST of mRNA_H-paniculata_contig77191.15737.1 vs. uniprot
Match: A0A540NMU0_MALBA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Malus baccata TaxID=106549 RepID=A0A540NMU0_MALBA)

HSP 1 Score: 61.6 bits (148), Expect = 5.220e-10
Identity = 30/74 (40.54%), Postives = 42/74 (56.76%), Query Frame = 0
Query:    2 QGLVDNGAWTQVERPKNKLVVGTMMIYKRKIGEDGKVEKYKCRLVAHGNRQIKGIHYQEASSPAPTAASTKMVL 75
            + L   G W  V  P+N+ V+G+  +YK K  +DGKV +YK RLVA G  Q  G+ Y E  SP     + ++VL
Sbjct:   74 EALQKQGTWELVPVPQNRNVIGSKWVYKLKKDQDGKVSRYKARLVAQGFSQEHGLEYDETFSPVVRHTTVRLVL 147          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig77191.15737.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A061F8M9_THECC2.530e-1246.58Cysteine-rich RLK (RECEPTOR-like protein kinase) 8... [more]
UPI00084940236.190e-1245.21uncharacterized mitochondrial protein AtMg00810 n=... [more]
A0A2I0HGX5_PUNGR2.610e-1147.46Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2P6SKU2_ROSCH7.980e-1141.33Putative RNA-directed DNA polymerase n=1 Tax=Rosa ... [more]
UPI001CB79F242.150e-1041.33hypothetical protein n=1 Tax=Blastococcus sp. CPCC... [more]
A0A1X7TFD5_AMPQE2.910e-1054.90Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A151T9B6_CAJCA3.790e-1038.67Retrovirus-related Pol polyprotein from transposon... [more]
A0A151T5R4_CAJCA3.830e-1041.33Retrovirus-related Pol polyprotein from transposon... [more]
UPI00090104FD5.080e-1040.28uncharacterized protein LOC104779870 isoform X1 n=... [more]
A0A540NMU0_MALBA5.220e-1040.54Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 9..73
e-value: 5.1E-12
score: 46.0
NoneNo IPR availablePANTHERPTHR11439:SF264coord: 3..64
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 3..64

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig77191contigH-paniculata_contig77191:29..253 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig77191.15737.1mRNA_H-paniculata_contig77191.15737.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig77191 29..283 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig77191.15737.1 ID=prot_H-paniculata_contig77191.15737.1|Name=mRNA_H-paniculata_contig77191.15737.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=75bp
MQGLVDNGAWTQVERPKNKLVVGTMMIYKRKIGEDGKVEKYKCRLVAHGN
RQIKGIHYQEASSPAPTAASTKMVL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like