prot_H-paniculata_contig7717.15735.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7717.15735.1
Unique Nameprot_H-paniculata_contig7717.15735.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length288
Homology
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BLAST of mRNA_H-paniculata_contig7717.15735.1 vs. uniprot
Match: D7FLM3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLM3_ECTSI)

HSP 1 Score: 270 bits (691), Expect = 7.800e-87
Identity = 154/300 (51.33%), Postives = 195/300 (65.00%), Query Frame = 0 
Query:    1 MGGAERKCMMADDGHPQLAHAKRCVDGSPGPGAYGTGDAAVMGHRGGTFAAADERRGVEVALEVTVAQLKTLEWRIGYIRRGIRDPDNVRTGQGLVIKEQPGGELERLEAKALSLTRQVQILSAAAAAARLSRDPLPGACLVT--RMGVEESRGREYRSRRPATMSRGGESGQ--RRASVQLTDRFYDPLWSKASFLDSPGPGSYTVNDNEDALGRGSMWRSPSFGLMEPRAVGERALAARSLASLHLHTTKIGGEK-EGHAL-------APFHAYISELGPGEFTPDMCAPLLPDKSRR 288
            MG   RKCM     HPQL HAKR     PGPGAY TGD+AVMGH GGTFAAAD RR    ALE+ V +LKTLEWRI +IRRG R+P+ +R GQ LV++ Q G EL R+E KA  L  +++ L   AA+   +RDPLPGA +    R G  E        RRPAT +    +G+  R  + Q  DRFYDP+ S A+FL+SPGPG+Y++   E A GR S+ RSP+F LM+ R +G++A A RSLASLHLH+ + GG    G++        APFHAY+SE G G +TPDM AP LP+++RR
Sbjct:    1 MGCGARKCMTPGKDHPQLPHAKRRDGAGPGPGAYATGDSAVMGHHGGTFAAADNRRAATAALEMVVGRLKTLEWRIEFIRRGEREPEKLRPGQSLVVRTQSGQELMRMEEKASRLRSEIKRLGKLAASEASTRDPLPGASIGRGGRAGGNE--------RRPATTAADCSTGRDKRGPAGQGKDRFYDPISSTATFLESPGPGAYSLTSGEGAFGRASISRSPAFDLMQRRVIGDQAAAGRSLASLHLHSAENGGGSGSGNSRGGRDGLGAPFHAYLSETGTGHYTPDMSAPPLPNEARR 292
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7717.15735.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FLM3_ECTSI7.800e-8751.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 105..125

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7717contigH-paniculata_contig7717:1840..4635 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7717.15735.1mRNA_H-paniculata_contig7717.15735.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7717 1840..4635 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7717.15735.1 ID=prot_H-paniculata_contig7717.15735.1|Name=mRNA_H-paniculata_contig7717.15735.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=288bp
MGGAERKCMMADDGHPQLAHAKRCVDGSPGPGAYGTGDAAVMGHRGGTFA
AADERRGVEVALEVTVAQLKTLEWRIGYIRRGIRDPDNVRTGQGLVIKEQ
PGGELERLEAKALSLTRQVQILSAAAAAARLSRDPLPGACLVTRMGVEES
RGREYRSRRPATMSRGGESGQRRASVQLTDRFYDPLWSKASFLDSPGPGS
YTVNDNEDALGRGSMWRSPSFGLMEPRAVGERALAARSLASLHLHTTKIG
GEKEGHALAPFHAYISELGPGEFTPDMCAPLLPDKSRR
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