prot_H-paniculata_contig77094.15727.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig77094.15727.1
Unique Nameprot_H-paniculata_contig77094.15727.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length109
Homology
[Close]
BLAST of mRNA_H-paniculata_contig77094.15727.1 vs. uniprot
Match: G0WGC4_NAUDC (Integrase catalytic domain-containing protein n=1 Tax=Naumovozyma dairenensis (strain ATCC 10597 / BCRC 20456 / CBS 421 / NBRC 0211 / NRRL Y-12639) TaxID=1071378 RepID=G0WGC4_NAUDC)

HSP 1 Score: 65.1 bits (157), Expect = 5.590e-10
Identity = 40/109 (36.70%), Postives = 55/109 (50.46%), Query Frame = 0 
Query:    4 VIDDRKTTDNPAVSRE---KEHWNSDTGATDHMTSDETAFEDYTPALPGTMSGWGRLVHLVSQSGGKSRIAMLNRVAYVPELRHNLISTRRATDTSGKSFIYSANKASL 109
             I D  TT++ A S       HW  DTG T HMT   +AF ++   + G++ G G  V +      K     LN V YVP+L  NLIS R+AT TS   F+++  K  +
Sbjct:  170 AISDSATTNSNATSSSALSSNHWIFDTGCTSHMTPHRSAFSEFHTDVSGSVKGAGGSVRIKGHGTVKLNGITLNDVLYVPDLPVNLISIRKATQTSKNKFVFTNEKVDV 278
[Close]
BLAST of mRNA_H-paniculata_contig77094.15727.1 vs. uniprot
Match: G0WG70_NAUDC (Peptidase A1 domain-containing protein n=1 Tax=Naumovozyma dairenensis (strain ATCC 10597 / BCRC 20456 / CBS 421 / NBRC 0211 / NRRL Y-12639) TaxID=1071378 RepID=G0WG70_NAUDC)

HSP 1 Score: 63.5 bits (153), Expect = 1.770e-9
Identity = 39/109 (35.78%), Postives = 54/109 (49.54%), Query Frame = 0 
Query:    4 VIDDRKTTDNPAVSRE---KEHWNSDTGATDHMTSDETAFEDYTPALPGTMSGWGRLVHLVSQSGGKSRIAMLNRVAYVPELRHNLISTRRATDTSGKSFIYSANKASL 109
             I D  TT++ A S       HW  DTG T HMT   + F ++   + G++ G G  V +      K     LN V YVP+L  NLIS R+AT TS   F+++  K  +
Sbjct:  320 AISDSATTNSNATSSSALSSNHWIFDTGCTSHMTPHRSVFSEFHTDVSGSVKGAGGSVRIKGHGTVKLNGITLNDVLYVPDLPVNLISIRKATQTSKNQFVFTNEKVDV 428
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig77094.15727.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
G0WGC4_NAUDC5.590e-1036.70Integrase catalytic domain-containing protein n=1 ... [more]
G0WG70_NAUDC1.770e-935.78Peptidase A1 domain-containing protein n=1 Tax=Nau... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig77094contigH-paniculata_contig77094:171..530 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig77094.15727.1mRNA_H-paniculata_contig77094.15727.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig77094 171..530 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig77094.15727.1 ID=prot_H-paniculata_contig77094.15727.1|Name=mRNA_H-paniculata_contig77094.15727.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=109bp
MTAVIDDRKTTDNPAVSREKEHWNSDTGATDHMTSDETAFEDYTPALPGT
MSGWGRLVHLVSQSGGKSRIAMLNRVAYVPELRHNLISTRRATDTSGKSF
IYSANKASL
back to top