prot_H-paniculata_contig7709.15726.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7709.15726.1
Unique Nameprot_H-paniculata_contig7709.15726.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length45
Homology
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BLAST of mRNA_H-paniculata_contig7709.15726.1 vs. uniprot
Match: A0A6H5K0Z2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0Z2_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 6.780e-11
Identity = 25/41 (60.98%), Postives = 35/41 (85.37%), Query Frame = 0 
Query:    1 QAVYISGLTTLMIYYVHYRLWAILGPIAVEATCIVYLTSYK 41
            QA+Y++GL TLMIYYVH+ LWA+  P+AVE +C++YLT+ K
Sbjct:   48 QAIYVTGLATLMIYYVHFGLWAVFFPVAVECSCLIYLTALK 88
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BLAST of mRNA_H-paniculata_contig7709.15726.1 vs. uniprot
Match: D8LCW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCW9_ECTSI)

HSP 1 Score: 52.4 bits (124), Expect = 9.600e-7
Identity = 24/42 (57.14%), Postives = 31/42 (73.81%), Query Frame = 0 
Query:    1 QAVYISGLTTLMIYYVHYRLWAILGPIAVEATCIVYLTSYKV 42
            QAVY  GL TLMIYY H+RLWA+  P+A E + ++YLT  K+
Sbjct:   44 QAVYTVGLLTLMIYYFHFRLWAVFYPMAFEFSSLMYLTGLKI 85
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7709.15726.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K0Z2_9PHAE6.780e-1160.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCW9_ECTSI9.600e-757.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..38
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 39..44
NoneNo IPR availableTMHMMTMhelixcoord: 15..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7709contigH-paniculata_contig7709:10985..11119 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7709.15726.1mRNA_H-paniculata_contig7709.15726.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7709 10985..11119 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7709.15726.1 ID=prot_H-paniculata_contig7709.15726.1|Name=mRNA_H-paniculata_contig7709.15726.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=45bp
QAVYISGLTTLMIYYVHYRLWAILGPIAVEATCIVYLTSYKVSQ*
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