prot_H-paniculata_contig7642.15638.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7642.15638.1
Unique Nameprot_H-paniculata_contig7642.15638.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length299
Homology
BLAST of mRNA_H-paniculata_contig7642.15638.1 vs. uniprot
Match: H3GB69_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB69_PHYRM)

HSP 1 Score: 186 bits (473), Expect = 9.680e-54
Identity = 109/283 (38.52%), Postives = 160/283 (56.54%), Query Frame = 0
Query:   39 FRVKDLGSLSRVLGIEVRRDRPNGTITISQGSYIRKVLKRYGFDECQGVPTPVEGTVKISAPESADKPSEPKSETSTEYRGMVGSLMYASTGTRSDIAYAVHQAVRRME---------------------DPWFFYLG-------------WAEDVEDRKSTTGYVFKLNGGAISWRSRKQQLVTWSSTEVEYVAAGEAGKETVYLRDLLGSIGFGCRGSTTLFEDNKSAINLSKGSGTYCRTKHIGVRWHGIREGVREGVLALNYVQTGDQLADNITKGLSR 287
            F +K+LG L   LGIE+ R+R + TI ++Q +YI+++ +++G ++C+ V TP +   K+  P S D+   P+      YR +VG+LMY +T TR DIA AV +  +  E                     D    + G             WA D++ R+STTGYVF LNG AISW+S++Q  V  SSTE EY+A   A +E V+LR LL  +G  C G+TT F+DN+  I L+K    + RTKHI +++H +RE V + V+ L Y  T + +AD  TK L+R
Sbjct:   21 FSIKELGELKYCLGIEIHRNRDDKTIVMNQRAYIQRLAEKFGVEKCKAVHTPADSNSKLVKP-SEDEDFVPR----YPYRELVGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDLGLVFNGGTKGELIGYADANWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNATQEAVWLRQLLLDVGCECVGATTFFQDNQGCIALAKNPAYHSRTKHIDLKYHFLREKVEDKVIVLEYKPTDEMIADGFTKALAR 298          
BLAST of mRNA_H-paniculata_contig7642.15638.1 vs. uniprot
Match: A0A2P4YHT5_9STRA (RxLR effector candidate protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YHT5_9STRA)

HSP 1 Score: 184 bits (467), Expect = 1.840e-52
Identity = 106/264 (40.15%), Postives = 160/264 (60.61%), Query Frame = 0
Query:   39 FRVKDLGSLSRVLGIEVRRDRPNGTITISQGSYIRKVLKRYGFDECQGVPTPVEGTVKISAPESADKPSEPKSETST-EYRGMVGSLMYASTGTRSDIAYA-VHQAVRRMEDPWFFYLG-------------WAEDVEDRKSTTGYVFKLNGGAISWRSRKQQLVTWSSTEVEYVAAGEAGKETVYLRDLLGSIGFGCRGSTTLFEDNKSAINLSKGSGTYCRTKHIGVRWHGIREGVREGVLALNYVQTGDQLADNITKGLSR 287
            F +K+LG L   LGIE+ R R    I ++Q +YI+++ +++G D+C+ V TP + + K+       KPSE +   +   YR +VG+LMY +T TR DIAYA V + ++  +D    + G             WA D++ R+STTGYVF LNG AISW+S++Q  V  SSTE EY+A   A +E V+LR LL  +G+  +G+TT+++DN+  I L+K    + RTKHI +++H +RE V    + L Y  T + +AD  TK L+R
Sbjct:   76 FSIKELGDLKYCLGIEIHRKRE--MIVMNQRAYIKRLAEKFGVDKCKDVYTPADSSAKLM------KPSEDEYFVAKYPYRELVGALMYLATSTRPDIAYARVLKYLKTTQDVGLVFNGGIKGELVGYADANWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNAIQEAVWLRQLLKDLGYENKGATTIYQDNQGCIALAKNPAYHTRTKHIDIKFHFLREKVESKTVELEYKPTDEMIADGFTKVLAR 331          
BLAST of mRNA_H-paniculata_contig7642.15638.1 vs. uniprot
Match: H3GB17_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB17_PHYRM)

HSP 1 Score: 183 bits (465), Expect = 1.730e-51
Identity = 107/283 (37.81%), Postives = 160/283 (56.54%), Query Frame = 0
Query:   39 FRVKDLGSLSRVLGIEVRRDRPNGTITISQGSYIRKVLKRYGFDECQGVPTPVEGTVKISAPESADKPSEPKSETSTEYRGMVGSLMYASTGTRSDIAYAVHQAVRRME---------------------DPWFFYLG-------------WAEDVEDRKSTTGYVFKLNGGAISWRSRKQQLVTWSSTEVEYVAAGEAGKETVYLRDLLGSIGFGCRGSTTLFEDNKSAINLSKGSGTYCRTKHIGVRWHGIREGVREGVLALNYVQTGDQLADNITKGLSR 287
            F +K+LG L   LGIE+ R+R + TI ++Q +YI+++ +++G ++C+ V TP +   K+  P + D+   P+      YR +VG+LMY +T TR DIA AV +  +  E                     D    + G             WA D++ R+STTGYVF LNG AISW+S++Q  V  SSTE EY+A   A +E V+LR LL  +G  C  +TT+F+DN+  I L+K    + RTKHI +++H +RE V + V+ L Y  T + +AD  TK L+R
Sbjct:  117 FSIKELGELKYCLGIEIHRNRDDKTIVMNQRAYIQRLAEKFGVEKCKAVHTPADSNSKLVKP-AEDEVFVPR----YPYRELVGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDLGLVFNGGTKGELIGYADASWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNATQEAVWLRQLLLDVGCECVAATTIFQDNQGCIALAKNPAYHSRTKHIDLKYHFLREKVEDKVIVLEYKPTDEMIADGFTKALAR 394          
BLAST of mRNA_H-paniculata_contig7642.15638.1 vs. uniprot
Match: A0A7D9D5L2_PARCT (Uncharacterized protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9D5L2_PARCT)

HSP 1 Score: 179 bits (455), Expect = 4.220e-51
Identity = 107/295 (36.27%), Postives = 158/295 (53.56%), Query Frame = 0
Query:   38 RFRVKDLGSLSRVLGIEVRRDRPNGTITISQGSYIRKVLKRYGFDECQGVPTPVEGTVKISAPESADKPSEPKSETSTEYRGMVGSLMYASTGTRSDIAYAVHQAVRRMEDP----W-------------------------------FFYLGWAEDVEDRKSTTGYVFKLNGGAISWRSRKQQLVTWSSTEVEYVAAGEAGKETVYLRDLLGSIGFGCRGSTTLFEDNKSAINLSKGSGTYCRTKHIGVRWHGIREGVREGVLALNYVQTGDQLADNITKGLSRVQSQRLRNLL 297
            +F+V D+G +  VLG+ +RRDR  G +TISQ +Y++ +LKR+G ++C+ V TP+E           + P +     + EY+ ++G L Y +T TR D+A AV    + M  P    W                               +    WA D++ R+ST+GYVF++NG  +SW S++Q  VT S+TE EYVA   A +E V+LR LL  IG      + + EDN+ AI LSK    + RTKHI V +H +RE V +  + +NY  T   LAD +TK L R   Q+ R++L
Sbjct:   12 KFKVDDMGEVKHVLGMVIRRDRRKGKMTISQSTYLQGILKRFGMEQCKPVSTPLEPGKHFQ-----ELPDDENPTNTNEYQKLIGCLTYVTTATRPDLASAVGILSKFMSKPSKEHWHGAKRVLRYIKDTVNYGLVFEGKSTKCSLIGYSDADWANDLDTRRSTSGYVFQINGSTVSWCSKRQPCVTRSTTEAEYVALSHATQEIVWLRRLLNDIGEKQDQPSIMNEDNQGAIELSKNPRFHNRTKHIDVAYHFVREKVGDKSINVNYCSTDKMLADVMTKSLPRQTFQKFRDML 301          
BLAST of mRNA_H-paniculata_contig7642.15638.1 vs. uniprot
Match: A0A4Y9ZY34_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZY34_9AGAM)

HSP 1 Score: 191 bits (484), Expect = 4.360e-51
Identity = 114/291 (39.18%), Postives = 155/291 (53.26%), Query Frame = 0
Query:   39 FRVKDLGSLSRVLGIEVRRDRPNGTITISQGSYIRKVLKRYGFDECQGVPTPV---EGTVKISAPESADKPSEPKSETSTEYRGMVGSLMYASTGTRSDIAYAV------------------------------HQAVRRMEDPW----FFYLGWAEDVEDRKSTTGYVFKLNGGAISWRSRKQQLVTWSSTEVEYVAAGEAGKETVYLRDLLGSIGFGCRGSTTLFEDNKSAINLSKGSGTYCRTKHIGVRWHGIREGVREGVLALNYVQTGDQLADNITKGLSRVQSQR 292
            F + DLG +  VLG+EV RDR   TI +SQ  Y+ ++L+R G+ + + + TP    E   K+ APE  D            Y+  +GSLMYA  GTR D+AY V                              +Q V   + PW    +    WA DV DR+S +GY F L GGA+SW S+KQ     SSTE EY+AA  A KE  +LR  LG IG  C+ +T L  DN+SA+ +++    + RTKHI VR+H +RE V  G + L YV TGDQ+AD +TKGL + +  +
Sbjct:  847 FNMSDLGEVHWVLGLEVIRDRNARTIALSQRRYVEEILERAGYSDARPIATPALANEHMAKVDAPE-VDV---------LTYQSGIGSLMYAMLGTRPDLAYTVGVLSQHTAKPGEAHQRALVRAFKYLRGTADYQLVFDGKKPWELTGYVDADWAGDVNDRRSISGYTFLLAGGAVSWSSKKQNTTALSSTEAEYIAAAHAAKEATWLRTFLGEIGRPCKTATLLLMDNQSAMAIARNPAFHARTKHIDVRYHFLREKVEAGAINLQYVPTGDQVADVLTKGLVKAKHDK 1127          
BLAST of mRNA_H-paniculata_contig7642.15638.1 vs. uniprot
Match: A0A4Y9ZSL8_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZSL8_9AGAM)

HSP 1 Score: 180 bits (456), Expect = 5.680e-51
Identity = 112/291 (38.49%), Postives = 150/291 (51.55%), Query Frame = 0
Query:   39 FRVKDLGSLSRVLGIEVRRDRPNGTITISQGSYIRKVLKRYGFDECQGVPTPV---EGTVKISAPESADKPSEPKSETSTEYRGMVGSLMYASTGTRSDIAYAV------------------------------HQAVRRMEDPW----FFYLGWAEDVEDRKSTTGYVFKLNGGAISWRSRKQQLVTWSSTEVEYVAAGEAGKETVYLRDLLGSIGFGCRGSTTLFEDNKSAINLSKGSGTYCRTKHIGVRWHGIREGVREGVLALNYVQTGDQLADNITKGLSRVQSQR 292
            F + DLG +  VLG+EV  DR   TIT+SQ  Y+ ++LK  G+ +   + TPV   E   K+ APE  D            Y+  +GSLMYA  GTR D+AY V                              +Q V   + PW    +    WA DV DR+S +GY F L GGAISW S+KQ     SSTE EY+ A  A KE  +LR  L  IG  C+ +T L  DN+SA+ ++     + RTKHI +R+H +RE V  G + L YV TGDQ+AD + KGL + +  +
Sbjct:   41 FNMSDLGEVHWVLGLEVIHDRNARTITLSQCRYVEEILKCAGYSDACPIATPVLANEHMAKVDAPE-VDV---------LTYQSGIGSLMYAMLGTRPDLAYTVGVLSQHTAKPGEAHQHALVHAFKYLRGTADYQLVFDGKKPWELTGYVDADWAGDVNDRRSISGYTFLLAGGAISWSSKKQNTTALSSTEAEYIVATHAAKEATWLRTFLSKIGRPCKAATLLLMDNQSAMAIAWNPAFHARTKHIDMRYHFLREKVEAGAINLQYVPTGDQVADVLMKGLVKAKHNK 321          
BLAST of mRNA_H-paniculata_contig7642.15638.1 vs. uniprot
Match: A0A401H2X4_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H2X4_9APHY)

HSP 1 Score: 179 bits (454), Expect = 6.630e-51
Identity = 110/294 (37.41%), Postives = 153/294 (52.04%), Query Frame = 0
Query:   38 RFRVKDLGSLSRVLGIEVRRDRPNGTITISQGSYIRKVLKRYGFDECQGVPTPV---EGTVKISAPESADKPSEPKSETSTEYRGMVGSLMYASTGTRSDIAYAV---------------------HQAVRRMEDPWFFYLG---------------WAEDVEDRKSTTGYVFKLNGGAISWRSRKQQLVTWSSTEVEYVAAGEAGKETVYLRDLLGSIGFGCRGSTTLFEDNKSAINLSKGSGTYCRTKHIGVRWHGIREGVREGVLALNYVQTGDQLADNITKGLSRVQSQR 292
            RF + DLG    +LG+E+ RDRP   + +SQ  Y+ K L +YG  +C+ V TP+   +  VK+S  E   KP          Y+  +GSLMYA  GT  D+A+ V                     ++ +R   D    Y G               WA ++ DR+S TG+VF ++ GA+SW S++Q     SSTE EY+A     KE V+LR  L  IG   +G T L  DN+SAI LSK +  + RTKHI VR+H IRE    G +   YV TG+Q+AD +TKGL R + ++
Sbjct:   21 RFEMTDLGEARWLLGMEITRDRPRRVLELSQHQYVEKCLAQYGMADCRPVSTPMAQNQKLVKLSEAEIDPKP----------YQSALGSLMYAMIGTHPDLAFTVSALSQHAATPGKEHWIALMRVYRYLRGTADKKLVYCGTTKEKEPLLGYVDADWAANINDRRSVTGFVFLISEGAVSWSSKRQHSTAQSSTEAEYMAGAHGTKEAVWLRTFLSEIGQVQKGPTPLLIDNQSAIALSKNAAFHERTKHIAVRYHFIREKYDSGEIEPEYVPTGNQVADVLTKGLPREKHEK 304          
BLAST of mRNA_H-paniculata_contig7642.15638.1 vs. uniprot
Match: A0A0S7JP25_9TELE (POLX n=2 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7JP25_9TELE)

HSP 1 Score: 178 bits (452), Expect = 5.710e-50
Identity = 107/291 (36.77%), Postives = 155/291 (53.26%), Query Frame = 0
Query:   38 RFRVKDLGSLSRVLGIEVRRDRPNGTITISQGSYIRKVLKRYGFDECQGVPTPVEGTVKISAPESADKPSEPKSETSTEYRGMVGSLMYASTGTRSDIAYAVHQAVRRMEDPWFFYL----------------------------------GWAEDVEDRKSTTGYVFKLNGGAISWRSRKQQLVTWSSTEVEYVAAGEAGKETVYLRDLLGSIGFGCRGSTTLFEDNKSAINLSKGSGTYCRTKHIGVRWHGIREGVREGVLALNYVQTGDQLADNITKGLSRVQSQRLR 294
            R+++KDLG LS +LGI V +D+    I + Q  YI  +LK+YG D+   V TP + +VK+   +    P +P +     Y+ MVGSL+YA+  TR DIA AV    +   +P   +L                                   WA D++DR STTG +F L+GGA+SW S+KQ  V  S+ E EYVA  +A +E  +LR LL  +G   +  T + EDN+ AI ++K    + RTKHI +R+H IRE V++G + L Y  T    AD +TK L+R + +  R
Sbjct:   77 RYKMKDLGELSYILGISVIQDKEKNCICLHQKQYIETILKKYGMDKANPVATPADISVKLKKDDGVSNPVDPST-----YQSMVGSLLYAAMTTRPDIAQAVSAVSKFNANPNTAHLTAVKRILRYLKGTVNLALKFDCAGNKDLIGFSDADWAGDLDDRHSTTGNIFLLSGGAVSWLSKKQATVALSTAEAEYVALSQAAQEGTWLRRLLNDLGMVTK-PTVILEDNQGAIAIAKNPVDHSRTKHIDIRYHYIRECVQDGEVKLEYCPTDKMKADILTKPLARQKFENFR 361          
BLAST of mRNA_H-paniculata_contig7642.15638.1 vs. uniprot
Match: A0A7D9M6E1_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9M6E1_PARCT)

HSP 1 Score: 179 bits (453), Expect = 5.840e-50
Identity = 106/294 (36.05%), Postives = 164/294 (55.78%), Query Frame = 0
Query:   38 RFRVKDLGSLSRVLGIEVRRDRPNGTITISQGSYIRKVLKRYGFDECQGVPTPVEGTVK-ISAPESADKPSEPKSETSTEYRGMVGSLMYASTGTRSDIAYAVHQAVRRM----EDPW------FFYL------------------------GWAEDVEDRKSTTGYVFKLNGGAISWRSRKQQLVTWSSTEVEYVAAGEAGKETVYLRDLLGSIGFGCRGSTTLFEDNKSAINLSKGSGTYCRTKHIGVRWHGIREGVREGVLALNYVQTGDQLADNITKGLSRVQSQRLRNL 296
            RF+VKD+G L  +LG++V ++  +G + I Q +Y   ++K+YG + C+ V TPV+ + K +SA E ++  ++       EY+  VGSL+Y S+ TR DI +AV+   +       + W      F YL                         WA D+ DRKST+GY F++NG A+SWRS+KQ  V  S+ E EYVA   A +E +++R LL  +        T++EDN+SAI +SK    + R+KHI +++H +R+ V +  L + Y  TG  LAD  TKG+ + Q ++LR L
Sbjct:   91 RFQVKDMGELKYILGLQVIQE--DGKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAMEDSELFNK------EEYQSAVGSLLYLSSATRPDITFAVNNVAKFSANFTNEHWTAVKRIFRYLKKTVNYGLLYSENANPDCVGFSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQTCVALSTAEAEYVALSAAAQEALWMRQLLTDLNVNIDKPMTIYEDNQSAIAMSKNPQFHGRSKHIDIKYHFVRDQVEKKTLTVLYCPTGSMLADLFTKGIPKEQFKKLREL 376          
BLAST of mRNA_H-paniculata_contig7642.15638.1 vs. uniprot
Match: A0A090BBM5_HYAAE (RxLR effector candidate protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=A0A090BBM5_HYAAE)

HSP 1 Score: 176 bits (445), Expect = 1.450e-49
Identity = 104/283 (36.75%), Postives = 151/283 (53.36%), Query Frame = 0
Query:   39 FRVKDLGSLSRVLGIEVRRDRPNGTITISQGSYIRKVLKRYGFDECQGVPTPVEGTVKISAPESADKPSEPKSETSTEYRGMVGSLMYASTGTRSDIAYAVHQAVRRME----DPW------------------------------FFYLGWAEDVEDRKSTTGYVFKLNGGAISWRSRKQQLVTWSSTEVEYVAAGEAGKETVYLRDLLGSIGFGCRGSTTLFEDNKSAINLSKGSGTYCRTKHIGVRWHGIREGVREGVLALNYVQTGDQLADNITKGLSR 287
            F +KDLG L   LGIE+ R R    I ++Q +YI+++ +++G D C+ V TP +   K+     A  P E        YR +VG+LMY +T TR DIA+AV +  +  E      W                              F    WA D++ R+STTGYVF LNG AISW S++Q  V  SSTE EY++   A +E ++LR LL  + +    +TT+F+DN+  I L+K    + RTKHI +++H +RE V   V+AL +  T + +AD  TK LS+
Sbjct:   21 FSIKDLGDLKYCLGIEIHRKRDERIIKMNQRAYIKRLAEKFGVDNCKDVHTPADSNAKL-----AKMPDEEVFVPKFPYRELVGALMYITTCTRPDIAHAVGEVAKYCERYNKSHWTAAKRIIKYLKTTQDMSIVFSGFNKGELLRFADANWAGDLDTRRSTTGYVFFLNGSAISWNSKRQSTVATSSTEAEYMSLYSATQEAIWLRCLLKDLQYCAEVATTIFQDNQGCIALAKNPVYHSRTKHIDIKFHFLREKVASEVIALEFKPTEEMIADGFTKALSK 298          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7642.15638.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
H3GB69_PHYRM9.680e-5438.52Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2P4YHT5_9STRA1.840e-5240.15RxLR effector candidate protein n=1 Tax=Phytophtho... [more]
H3GB17_PHYRM1.730e-5137.81Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A7D9D5L2_PARCT4.220e-5136.27Uncharacterized protein n=1 Tax=Paramuricea clavat... [more]
A0A4Y9ZY34_9AGAM4.360e-5139.18Integrase catalytic domain-containing protein n=1 ... [more]
A0A4Y9ZSL8_9AGAM5.680e-5138.49Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A401H2X4_9APHY6.630e-5137.41Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A0S7JP25_9TELE5.710e-5036.77POLX n=2 Tax=Poeciliopsis prolifica TaxID=188132 R... [more]
A0A7D9M6E1_PARCT5.840e-5036.05Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A090BBM5_HYAAE1.450e-4936.75RxLR effector candidate protein n=1 Tax=Hyaloperon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 36..91
e-value: 2.7E-7
score: 30.5
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 156..265
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 156..265

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7642contigH-paniculata_contig7642:604..1884 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7642.15638.1mRNA_H-paniculata_contig7642.15638.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7642 580..1884 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7642.15638.1 ID=prot_H-paniculata_contig7642.15638.1|Name=mRNA_H-paniculata_contig7642.15638.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=299bp
MGVAAVYLNASVEEEFFLKQSPSFPLSPVTYRLCAACRFRVKDLGSLSRV
LGIEVRRDRPNGTITISQGSYIRKVLKRYGFDECQGVPTPVEGTVKISAP
ESADKPSEPKSETSTEYRGMVGSLMYASTGTRSDIAYAVHQAVRRMEDPW
FFYLGWAEDVEDRKSTTGYVFKLNGGAISWRSRKQQLVTWSSTEVEYVAA
GEAGKETVYLRDLLGSIGFGCRGSTTLFEDNKSAINLSKGSGTYCRTKHI
GVRWHGIREGVREGVLALNYVQTGDQLADNITKGLSRVQSQRLRNLLM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like