mRNA_H-paniculata_contig7642.15638.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig7642.15638.1 vs. uniprot
Match: H3GB69_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB69_PHYRM) HSP 1 Score: 186 bits (473), Expect = 1.240e-53 Identity = 109/283 (38.52%), Postives = 160/283 (56.54%), Query Frame = 1
Query: 139 FRVKDLGSLSRVLGIEVRRDRPNGTITISQGSYIRKVLKRYGFDECQGVPTPVEGTVKISAPESADKPSEPKSETSTEYRGMVGSLMYASTGTRSDIAYAVHQAVRRME---------------------DPWFFYLG-------------WAEDVEDRKSTTGYVFKLNGGAISWRSRKQQLVTWSSTEVEYVAAGEAGKETVYLRDLLGSIGFGCRGSTTLFEDNKSAINLSKGSGTYCRTKHIGVRWHGIREGVREGVLALNYVQTGDQLADNITKGLSR 885
F +K+LG L LGIE+ R+R + TI ++Q +YI+++ +++G ++C+ V TP + K+ P S D+ P+ YR +VG+LMY +T TR DIA AV + + E D + G WA D++ R+STTGYVF LNG AISW+S++Q V SSTE EY+A A +E V+LR LL +G C G+TT F+DN+ I L+K + RTKHI +++H +RE V + V+ L Y T + +AD TK L+R
Sbjct: 21 FSIKELGELKYCLGIEIHRNRDDKTIVMNQRAYIQRLAEKFGVEKCKAVHTPADSNSKLVKP-SEDEDFVPR----YPYRELVGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDLGLVFNGGTKGELIGYADANWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNATQEAVWLRQLLLDVGCECVGATTFFQDNQGCIALAKNPAYHSRTKHIDLKYHFLREKVEDKVIVLEYKPTDEMIADGFTKALAR 298
BLAST of mRNA_H-paniculata_contig7642.15638.1 vs. uniprot
Match: A0A2P4YHT5_9STRA (RxLR effector candidate protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YHT5_9STRA) HSP 1 Score: 184 bits (467), Expect = 2.360e-52 Identity = 106/264 (40.15%), Postives = 160/264 (60.61%), Query Frame = 1
Query: 139 FRVKDLGSLSRVLGIEVRRDRPNGTITISQGSYIRKVLKRYGFDECQGVPTPVEGTVKISAPESADKPSEPKSETST-EYRGMVGSLMYASTGTRSDIAYA-VHQAVRRMEDPWFFYLG-------------WAEDVEDRKSTTGYVFKLNGGAISWRSRKQQLVTWSSTEVEYVAAGEAGKETVYLRDLLGSIGFGCRGSTTLFEDNKSAINLSKGSGTYCRTKHIGVRWHGIREGVREGVLALNYVQTGDQLADNITKGLSR 885
F +K+LG L LGIE+ R R I ++Q +YI+++ +++G D+C+ V TP + + K+ KPSE + + YR +VG+LMY +T TR DIAYA V + ++ +D + G WA D++ R+STTGYVF LNG AISW+S++Q V SSTE EY+A A +E V+LR LL +G+ +G+TT+++DN+ I L+K + RTKHI +++H +RE V + L Y T + +AD TK L+R
Sbjct: 76 FSIKELGDLKYCLGIEIHRKRE--MIVMNQRAYIKRLAEKFGVDKCKDVYTPADSSAKLM------KPSEDEYFVAKYPYRELVGALMYLATSTRPDIAYARVLKYLKTTQDVGLVFNGGIKGELVGYADANWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNAIQEAVWLRQLLKDLGYENKGATTIYQDNQGCIALAKNPAYHTRTKHIDIKFHFLREKVESKTVELEYKPTDEMIADGFTKVLAR 331
BLAST of mRNA_H-paniculata_contig7642.15638.1 vs. uniprot
Match: H3GB17_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB17_PHYRM) HSP 1 Score: 183 bits (465), Expect = 2.210e-51 Identity = 107/283 (37.81%), Postives = 160/283 (56.54%), Query Frame = 1
Query: 139 FRVKDLGSLSRVLGIEVRRDRPNGTITISQGSYIRKVLKRYGFDECQGVPTPVEGTVKISAPESADKPSEPKSETSTEYRGMVGSLMYASTGTRSDIAYAVHQAVRRME---------------------DPWFFYLG-------------WAEDVEDRKSTTGYVFKLNGGAISWRSRKQQLVTWSSTEVEYVAAGEAGKETVYLRDLLGSIGFGCRGSTTLFEDNKSAINLSKGSGTYCRTKHIGVRWHGIREGVREGVLALNYVQTGDQLADNITKGLSR 885
F +K+LG L LGIE+ R+R + TI ++Q +YI+++ +++G ++C+ V TP + K+ P + D+ P+ YR +VG+LMY +T TR DIA AV + + E D + G WA D++ R+STTGYVF LNG AISW+S++Q V SSTE EY+A A +E V+LR LL +G C +TT+F+DN+ I L+K + RTKHI +++H +RE V + V+ L Y T + +AD TK L+R
Sbjct: 117 FSIKELGELKYCLGIEIHRNRDDKTIVMNQRAYIQRLAEKFGVEKCKAVHTPADSNSKLVKP-AEDEVFVPR----YPYRELVGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDLGLVFNGGTKGELIGYADASWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNATQEAVWLRQLLLDVGCECVAATTIFQDNQGCIALAKNPAYHSRTKHIDLKYHFLREKVEDKVIVLEYKPTDEMIADGFTKALAR 394
BLAST of mRNA_H-paniculata_contig7642.15638.1 vs. uniprot
Match: A0A7D9D5L2_PARCT (Uncharacterized protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9D5L2_PARCT) HSP 1 Score: 179 bits (455), Expect = 5.390e-51 Identity = 107/295 (36.27%), Postives = 158/295 (53.56%), Query Frame = 1
Query: 136 RFRVKDLGSLSRVLGIEVRRDRPNGTITISQGSYIRKVLKRYGFDECQGVPTPVEGTVKISAPESADKPSEPKSETSTEYRGMVGSLMYASTGTRSDIAYAVHQAVRRMEDP----W-------------------------------FFYLGWAEDVEDRKSTTGYVFKLNGGAISWRSRKQQLVTWSSTEVEYVAAGEAGKETVYLRDLLGSIGFGCRGSTTLFEDNKSAINLSKGSGTYCRTKHIGVRWHGIREGVREGVLALNYVQTGDQLADNITKGLSRVQSQRLRNLL 915
+F+V D+G + VLG+ +RRDR G +TISQ +Y++ +LKR+G ++C+ V TP+E + P + + EY+ ++G L Y +T TR D+A AV + M P W + WA D++ R+ST+GYVF++NG +SW S++Q VT S+TE EYVA A +E V+LR LL IG + + EDN+ AI LSK + RTKHI V +H +RE V + + +NY T LAD +TK L R Q+ R++L
Sbjct: 12 KFKVDDMGEVKHVLGMVIRRDRRKGKMTISQSTYLQGILKRFGMEQCKPVSTPLEPGKHFQ-----ELPDDENPTNTNEYQKLIGCLTYVTTATRPDLASAVGILSKFMSKPSKEHWHGAKRVLRYIKDTVNYGLVFEGKSTKCSLIGYSDADWANDLDTRRSTSGYVFQINGSTVSWCSKRQPCVTRSTTEAEYVALSHATQEIVWLRRLLNDIGEKQDQPSIMNEDNQGAIELSKNPRFHNRTKHIDVAYHFVREKVGDKSINVNYCSTDKMLADVMTKSLPRQTFQKFRDML 301
BLAST of mRNA_H-paniculata_contig7642.15638.1 vs. uniprot
Match: A0A4Y9ZY34_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZY34_9AGAM) HSP 1 Score: 191 bits (484), Expect = 5.630e-51 Identity = 114/291 (39.18%), Postives = 155/291 (53.26%), Query Frame = 1
Query: 139 FRVKDLGSLSRVLGIEVRRDRPNGTITISQGSYIRKVLKRYGFDECQGVPTPV---EGTVKISAPESADKPSEPKSETSTEYRGMVGSLMYASTGTRSDIAYAV------------------------------HQAVRRMEDPW----FFYLGWAEDVEDRKSTTGYVFKLNGGAISWRSRKQQLVTWSSTEVEYVAAGEAGKETVYLRDLLGSIGFGCRGSTTLFEDNKSAINLSKGSGTYCRTKHIGVRWHGIREGVREGVLALNYVQTGDQLADNITKGLSRVQSQR 900
F + DLG + VLG+EV RDR TI +SQ Y+ ++L+R G+ + + + TP E K+ APE D Y+ +GSLMYA GTR D+AY V +Q V + PW + WA DV DR+S +GY F L GGA+SW S+KQ SSTE EY+AA A KE +LR LG IG C+ +T L DN+SA+ +++ + RTKHI VR+H +RE V G + L YV TGDQ+AD +TKGL + + +
Sbjct: 847 FNMSDLGEVHWVLGLEVIRDRNARTIALSQRRYVEEILERAGYSDARPIATPALANEHMAKVDAPE-VDV---------LTYQSGIGSLMYAMLGTRPDLAYTVGVLSQHTAKPGEAHQRALVRAFKYLRGTADYQLVFDGKKPWELTGYVDADWAGDVNDRRSISGYTFLLAGGAVSWSSKKQNTTALSSTEAEYIAAAHAAKEATWLRTFLGEIGRPCKTATLLLMDNQSAMAIARNPAFHARTKHIDVRYHFLREKVEAGAINLQYVPTGDQVADVLTKGLVKAKHDK 1127
BLAST of mRNA_H-paniculata_contig7642.15638.1 vs. uniprot
Match: A0A4Y9ZSL8_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZSL8_9AGAM) HSP 1 Score: 180 bits (456), Expect = 7.270e-51 Identity = 112/291 (38.49%), Postives = 150/291 (51.55%), Query Frame = 1
Query: 139 FRVKDLGSLSRVLGIEVRRDRPNGTITISQGSYIRKVLKRYGFDECQGVPTPV---EGTVKISAPESADKPSEPKSETSTEYRGMVGSLMYASTGTRSDIAYAV------------------------------HQAVRRMEDPW----FFYLGWAEDVEDRKSTTGYVFKLNGGAISWRSRKQQLVTWSSTEVEYVAAGEAGKETVYLRDLLGSIGFGCRGSTTLFEDNKSAINLSKGSGTYCRTKHIGVRWHGIREGVREGVLALNYVQTGDQLADNITKGLSRVQSQR 900
F + DLG + VLG+EV DR TIT+SQ Y+ ++LK G+ + + TPV E K+ APE D Y+ +GSLMYA GTR D+AY V +Q V + PW + WA DV DR+S +GY F L GGAISW S+KQ SSTE EY+ A A KE +LR L IG C+ +T L DN+SA+ ++ + RTKHI +R+H +RE V G + L YV TGDQ+AD + KGL + + +
Sbjct: 41 FNMSDLGEVHWVLGLEVIHDRNARTITLSQCRYVEEILKCAGYSDACPIATPVLANEHMAKVDAPE-VDV---------LTYQSGIGSLMYAMLGTRPDLAYTVGVLSQHTAKPGEAHQHALVHAFKYLRGTADYQLVFDGKKPWELTGYVDADWAGDVNDRRSISGYTFLLAGGAISWSSKKQNTTALSSTEAEYIVATHAAKEATWLRTFLSKIGRPCKAATLLLMDNQSAMAIAWNPAFHARTKHIDMRYHFLREKVEAGAINLQYVPTGDQVADVLMKGLVKAKHNK 321
BLAST of mRNA_H-paniculata_contig7642.15638.1 vs. uniprot
Match: A0A401H2X4_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H2X4_9APHY) HSP 1 Score: 179 bits (454), Expect = 8.470e-51 Identity = 110/294 (37.41%), Postives = 153/294 (52.04%), Query Frame = 1
Query: 136 RFRVKDLGSLSRVLGIEVRRDRPNGTITISQGSYIRKVLKRYGFDECQGVPTPV---EGTVKISAPESADKPSEPKSETSTEYRGMVGSLMYASTGTRSDIAYAV---------------------HQAVRRMEDPWFFYLG---------------WAEDVEDRKSTTGYVFKLNGGAISWRSRKQQLVTWSSTEVEYVAAGEAGKETVYLRDLLGSIGFGCRGSTTLFEDNKSAINLSKGSGTYCRTKHIGVRWHGIREGVREGVLALNYVQTGDQLADNITKGLSRVQSQR 900
RF + DLG +LG+E+ RDRP + +SQ Y+ K L +YG +C+ V TP+ + VK+S E KP Y+ +GSLMYA GT D+A+ V ++ +R D Y G WA ++ DR+S TG+VF ++ GA+SW S++Q SSTE EY+A KE V+LR L IG +G T L DN+SAI LSK + + RTKHI VR+H IRE G + YV TG+Q+AD +TKGL R + ++
Sbjct: 21 RFEMTDLGEARWLLGMEITRDRPRRVLELSQHQYVEKCLAQYGMADCRPVSTPMAQNQKLVKLSEAEIDPKP----------YQSALGSLMYAMIGTHPDLAFTVSALSQHAATPGKEHWIALMRVYRYLRGTADKKLVYCGTTKEKEPLLGYVDADWAANINDRRSVTGFVFLISEGAVSWSSKRQHSTAQSSTEAEYMAGAHGTKEAVWLRTFLSEIGQVQKGPTPLLIDNQSAIALSKNAAFHERTKHIAVRYHFIREKYDSGEIEPEYVPTGNQVADVLTKGLPREKHEK 304
BLAST of mRNA_H-paniculata_contig7642.15638.1 vs. uniprot
Match: A0A0S7JP25_9TELE (POLX n=2 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7JP25_9TELE) HSP 1 Score: 178 bits (452), Expect = 7.290e-50 Identity = 107/291 (36.77%), Postives = 155/291 (53.26%), Query Frame = 1
Query: 136 RFRVKDLGSLSRVLGIEVRRDRPNGTITISQGSYIRKVLKRYGFDECQGVPTPVEGTVKISAPESADKPSEPKSETSTEYRGMVGSLMYASTGTRSDIAYAVHQAVRRMEDPWFFYL----------------------------------GWAEDVEDRKSTTGYVFKLNGGAISWRSRKQQLVTWSSTEVEYVAAGEAGKETVYLRDLLGSIGFGCRGSTTLFEDNKSAINLSKGSGTYCRTKHIGVRWHGIREGVREGVLALNYVQTGDQLADNITKGLSRVQSQRLR 906
R+++KDLG LS +LGI V +D+ I + Q YI +LK+YG D+ V TP + +VK+ + P +P + Y+ MVGSL+YA+ TR DIA AV + +P +L WA D++DR STTG +F L+GGA+SW S+KQ V S+ E EYVA +A +E +LR LL +G + T + EDN+ AI ++K + RTKHI +R+H IRE V++G + L Y T AD +TK L+R + + R
Sbjct: 77 RYKMKDLGELSYILGISVIQDKEKNCICLHQKQYIETILKKYGMDKANPVATPADISVKLKKDDGVSNPVDPST-----YQSMVGSLLYAAMTTRPDIAQAVSAVSKFNANPNTAHLTAVKRILRYLKGTVNLALKFDCAGNKDLIGFSDADWAGDLDDRHSTTGNIFLLSGGAVSWLSKKQATVALSTAEAEYVALSQAAQEGTWLRRLLNDLGMVTK-PTVILEDNQGAIAIAKNPVDHSRTKHIDIRYHYIRECVQDGEVKLEYCPTDKMKADILTKPLARQKFENFR 361
BLAST of mRNA_H-paniculata_contig7642.15638.1 vs. uniprot
Match: A0A7D9M6E1_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9M6E1_PARCT) HSP 1 Score: 179 bits (453), Expect = 7.460e-50 Identity = 106/294 (36.05%), Postives = 164/294 (55.78%), Query Frame = 1
Query: 136 RFRVKDLGSLSRVLGIEVRRDRPNGTITISQGSYIRKVLKRYGFDECQGVPTPVEGTVK-ISAPESADKPSEPKSETSTEYRGMVGSLMYASTGTRSDIAYAVHQAVRRM----EDPW------FFYL------------------------GWAEDVEDRKSTTGYVFKLNGGAISWRSRKQQLVTWSSTEVEYVAAGEAGKETVYLRDLLGSIGFGCRGSTTLFEDNKSAINLSKGSGTYCRTKHIGVRWHGIREGVREGVLALNYVQTGDQLADNITKGLSRVQSQRLRNL 912
RF+VKD+G L +LG++V ++ +G + I Q +Y ++K+YG + C+ V TPV+ + K +SA E ++ ++ EY+ VGSL+Y S+ TR DI +AV+ + + W F YL WA D+ DRKST+GY F++NG A+SWRS+KQ V S+ E EYVA A +E +++R LL + T++EDN+SAI +SK + R+KHI +++H +R+ V + L + Y TG LAD TKG+ + Q ++LR L
Sbjct: 91 RFQVKDMGELKYILGLQVIQE--DGKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAMEDSELFNK------EEYQSAVGSLLYLSSATRPDITFAVNNVAKFSANFTNEHWTAVKRIFRYLKKTVNYGLLYSENANPDCVGFSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQTCVALSTAEAEYVALSAAAQEALWMRQLLTDLNVNIDKPMTIYEDNQSAIAMSKNPQFHGRSKHIDIKYHFVRDQVEKKTLTVLYCPTGSMLADLFTKGIPKEQFKKLREL 376
BLAST of mRNA_H-paniculata_contig7642.15638.1 vs. uniprot
Match: A0A090BBM5_HYAAE (RxLR effector candidate protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=A0A090BBM5_HYAAE) HSP 1 Score: 176 bits (445), Expect = 1.850e-49 Identity = 104/283 (36.75%), Postives = 151/283 (53.36%), Query Frame = 1
Query: 139 FRVKDLGSLSRVLGIEVRRDRPNGTITISQGSYIRKVLKRYGFDECQGVPTPVEGTVKISAPESADKPSEPKSETSTEYRGMVGSLMYASTGTRSDIAYAVHQAVRRME----DPW------------------------------FFYLGWAEDVEDRKSTTGYVFKLNGGAISWRSRKQQLVTWSSTEVEYVAAGEAGKETVYLRDLLGSIGFGCRGSTTLFEDNKSAINLSKGSGTYCRTKHIGVRWHGIREGVREGVLALNYVQTGDQLADNITKGLSR 885
F +KDLG L LGIE+ R R I ++Q +YI+++ +++G D C+ V TP + K+ A P E YR +VG+LMY +T TR DIA+AV + + E W F WA D++ R+STTGYVF LNG AISW S++Q V SSTE EY++ A +E ++LR LL + + +TT+F+DN+ I L+K + RTKHI +++H +RE V V+AL + T + +AD TK LS+
Sbjct: 21 FSIKDLGDLKYCLGIEIHRKRDERIIKMNQRAYIKRLAEKFGVDNCKDVHTPADSNAKL-----AKMPDEEVFVPKFPYRELVGALMYITTCTRPDIAHAVGEVAKYCERYNKSHWTAAKRIIKYLKTTQDMSIVFSGFNKGELLRFADANWAGDLDTRRSTTGYVFFLNGSAISWNSKRQSTVATSSTEAEYMSLYSATQEAIWLRCLLKDLQYCAEVATTIFQDNQGCIALAKNPVYHSRTKHIDIKFHFLREKVASEVIALEFKPTEEMIADGFTKALSK 298 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7642.15638.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig7642.15638.1 >prot_H-paniculata_contig7642.15638.1 ID=prot_H-paniculata_contig7642.15638.1|Name=mRNA_H-paniculata_contig7642.15638.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=299bp MGVAAVYLNASVEEEFFLKQSPSFPLSPVTYRLCAACRFRVKDLGSLSRVback to top mRNA from alignment at H-paniculata_contig7642:580..1884+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig7642.15638.1 ID=mRNA_H-paniculata_contig7642.15638.1|Name=mRNA_H-paniculata_contig7642.15638.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1305bp|location=Sequence derived from alignment at H-paniculata_contig7642:580..1884+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig7642:580..1884+ >mRNA_H-paniculata_contig7642.15638.1 ID=mRNA_H-paniculata_contig7642.15638.1|Name=mRNA_H-paniculata_contig7642.15638.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1794bp|location=Sequence derived from alignment at H-paniculata_contig7642:580..1884+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |