prot_H-paniculata_contig763.15623.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig763.15623.1
Unique Nameprot_H-paniculata_contig763.15623.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length147
Homology
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BLAST of mRNA_H-paniculata_contig763.15623.1 vs. uniprot
Match: D7G6Z9_ECTSI (Dynein light chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6Z9_ECTSI)

HSP 1 Score: 99.8 bits (247), Expect = 9.090e-23
Identity = 64/151 (42.38%), Postives = 90/151 (59.60%), Query Frame = 0 
Query:    1 MLPMLSAVDGLPQIQASPAHDAEKASVDAITARNRLP----ILKYDDPVLAQPHPGFNMGLGHDSLPQYIALYSLNDERRQQKPPLAAGRFVGSGITGPPGMQ--CKRPHGHSKDETSAILKAIIPNKEWKTKEGNWVQTVSKKLGTDGDI 145
            M+P  SA+  LP    + A  AE A+    ++ + +     ILKY+DPVLA+P   F+M +GHDSLPQYI+LY+ +DERR   P  A  R  G G   P   +   +RP G   D+ +A+LKAI+PNKE+    G WVQTVS  + + G++
Sbjct:   19 MIPEPSALGDLPLGALTEAVSAESAAGPTCSSADEVDDDFSILKYEDPVLARPDIAFDMRMGHDSLPQYISLYA-SDERR---PDEATQRLAGVGAAAPGSTRNTTRRPRGGG-DDITAVLKAILPNKEYADAAGEWVQTVSGTVRSRGEL 164
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig763.15623.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G6Z9_ECTSI9.090e-2342.38Dynein light chain n=1 Tax=Ectocarpus siliculosus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig763contigH-paniculata_contig763:16098..17711 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig763.15623.1mRNA_H-paniculata_contig763.15623.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig763 16056..18101 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig763.15623.1 ID=prot_H-paniculata_contig763.15623.1|Name=mRNA_H-paniculata_contig763.15623.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=147bp
MLPMLSAVDGLPQIQASPAHDAEKASVDAITARNRLPILKYDDPVLAQPH
PGFNMGLGHDSLPQYIALYSLNDERRQQKPPLAAGRFVGSGITGPPGMQC
KRPHGHSKDETSAILKAIIPNKEWKTKEGNWVQTVSKKLGTDGDIG*
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