prot_H-paniculata_contig76169.15610.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig76169.15610.1
Unique Nameprot_H-paniculata_contig76169.15610.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length51
Homology
BLAST of mRNA_H-paniculata_contig76169.15610.1 vs. uniprot
Match: D8LTM6_ECTSI (Phosphodiesterase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTM6_ECTSI)

HSP 1 Score: 84.7 bits (208), Expect = 6.550e-18
Identity = 35/45 (77.78%), Postives = 38/45 (84.44%), Query Frame = 0
Query:    2 EEFHRQGDLEASTGVPISPLCGWEGRNPAKSQCDFIDFVVRPCAV 46
            EEFHRQGDLEA  GVP+SPLC  EG N AKSQCDF++FVVRPCA 
Sbjct:  552 EEFHRQGDLEAEKGVPVSPLCSREGHNQAKSQCDFVNFVVRPCAT 596          
BLAST of mRNA_H-paniculata_contig76169.15610.1 vs. uniprot
Match: A0A7S3XSI7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XSI7_HETAK)

HSP 1 Score: 69.7 bits (169), Expect = 1.070e-12
Identity = 33/46 (71.74%), Postives = 34/46 (73.91%), Query Frame = 0
Query:    2 EEFHRQGDLEASTGVPISPLCGWE-GRNPAKSQCDFIDFVVRPCAV 46
            EEF RQGD E   GVPISPLC    G N AKSQCDF+DFVVRPC V
Sbjct:  275 EEFWRQGDAERRRGVPISPLCDRHAGGNFAKSQCDFVDFVVRPCLV 320          
BLAST of mRNA_H-paniculata_contig76169.15610.1 vs. uniprot
Match: A0A835Z5P1_9STRA (Phosphodiesterase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5P1_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 8.230e-12
Identity = 29/45 (64.44%), Postives = 32/45 (71.11%), Query Frame = 0
Query:    2 EEFHRQGDLEASTGVPISPLCGWEGRNPAKSQCDFIDFVVRPCAV 46
            EEF +QGDLE   G+ ISPLC     N AKSQCDFIDF+VRPC  
Sbjct: 1754 EEFFKQGDLERGQGLQISPLCDRAQGNLAKSQCDFIDFIVRPCVT 1798          
BLAST of mRNA_H-paniculata_contig76169.15610.1 vs. uniprot
Match: D7G4U4_ECTSI (Phosphodiesterase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4U4_ECTSI)

HSP 1 Score: 67.0 bits (162), Expect = 1.120e-11
Identity = 27/45 (60.00%), Postives = 33/45 (73.33%), Query Frame = 0
Query:    2 EEFHRQGDLEASTGVPISPLCGWEGRNPAKSQCDFIDFVVRPCAV 46
            EEF +QGD EA+ G+ +SPLC    +N  KSQCDFIDF+VRPC  
Sbjct:  676 EEFFKQGDKEAARGLAVSPLCDRRDQNLPKSQCDFIDFIVRPCVT 720          
BLAST of mRNA_H-paniculata_contig76169.15610.1 vs. uniprot
Match: A0A7E4VQG2_PANRE (PDEase domain-containing protein n=1 Tax=Panagrellus redivivus TaxID=6233 RepID=A0A7E4VQG2_PANRE)

HSP 1 Score: 60.5 bits (145), Expect = 4.120e-10
Identity = 28/46 (60.87%), Postives = 32/46 (69.57%), Query Frame = 0
Query:    1 LEEFHRQGDLEASTGVPISPLCGWEGRNPAKSQCDFIDFVVRPCAV 46
            LEEF RQGDLEAS G+P SPLC     + A+SQ  FIDF+V P  V
Sbjct:   64 LEEFFRQGDLEASMGLPYSPLCDRHTVHVAESQIGFIDFIVEPTMV 109          
BLAST of mRNA_H-paniculata_contig76169.15610.1 vs. uniprot
Match: A0A2G9TT39_TELCI (3'5'-cyclic nucleotide phosphodiesterase (Fragment) n=1 Tax=Teladorsagia circumcincta TaxID=45464 RepID=A0A2G9TT39_TELCI)

HSP 1 Score: 59.7 bits (143), Expect = 4.330e-10
Identity = 28/46 (60.87%), Postives = 31/46 (67.39%), Query Frame = 0
Query:    1 LEEFHRQGDLEASTGVPISPLCGWEGRNPAKSQCDFIDFVVRPCAV 46
            LEEF RQGDLEAS G+P SPLC     + A SQ  FIDF+V P  V
Sbjct:   34 LEEFFRQGDLEASMGLPYSPLCDRHTVHVADSQIGFIDFIVEPTMV 79          
BLAST of mRNA_H-paniculata_contig76169.15610.1 vs. uniprot
Match: A0A0R3QGT8_9BILA (PDEase domain-containing protein n=2 Tax=Brugia timori TaxID=42155 RepID=A0A0R3QGT8_9BILA)

HSP 1 Score: 59.3 bits (142), Expect = 1.130e-9
Identity = 27/46 (58.70%), Postives = 31/46 (67.39%), Query Frame = 0
Query:    1 LEEFHRQGDLEASTGVPISPLCGWEGRNPAKSQCDFIDFVVRPCAV 46
            LEEF RQGDLEAS G+P SPLC     + A SQ  FIDF+V P  +
Sbjct:   63 LEEFFRQGDLEASMGLPYSPLCDRNTVHVADSQIGFIDFIVEPTMI 108          
BLAST of mRNA_H-paniculata_contig76169.15610.1 vs. uniprot
Match: A0A6V7TMV6_9BILA (Phosphodiesterase n=2 Tax=Meloidogyne TaxID=189290 RepID=A0A6V7TMV6_9BILA)

HSP 1 Score: 61.2 bits (147), Expect = 1.220e-9
Identity = 28/46 (60.87%), Postives = 32/46 (69.57%), Query Frame = 0
Query:    1 LEEFHRQGDLEASTGVPISPLCGWEGRNPAKSQCDFIDFVVRPCAV 46
            LEEF RQGDLEAS G+P SPLC     + A+SQ  FIDF+V P  V
Sbjct:  368 LEEFFRQGDLEASMGLPYSPLCDRHTTHVAESQIGFIDFIVEPTMV 413          
BLAST of mRNA_H-paniculata_contig76169.15610.1 vs. uniprot
Match: A0A6V7W380_9BILA (Phosphodiesterase n=1 Tax=Meloidogyne enterolobii TaxID=390850 RepID=A0A6V7W380_9BILA)

HSP 1 Score: 61.2 bits (147), Expect = 1.220e-9
Identity = 28/46 (60.87%), Postives = 32/46 (69.57%), Query Frame = 0
Query:    1 LEEFHRQGDLEASTGVPISPLCGWEGRNPAKSQCDFIDFVVRPCAV 46
            LEEF RQGDLEAS G+P SPLC     + A+SQ  FIDF+V P  V
Sbjct:  676 LEEFFRQGDLEASMGLPYSPLCDRHTTHVAESQIGFIDFIVEPTMV 721          
BLAST of mRNA_H-paniculata_contig76169.15610.1 vs. uniprot
Match: A0A183GLA2_HELPZ (PDEase domain-containing protein n=2 Tax=Heligmosomoides polygyrus TaxID=6339 RepID=A0A183GLA2_HELPZ)

HSP 1 Score: 60.5 bits (145), Expect = 1.580e-9
Identity = 28/46 (60.87%), Postives = 32/46 (69.57%), Query Frame = 0
Query:    1 LEEFHRQGDLEASTGVPISPLCGWEGRNPAKSQCDFIDFVVRPCAV 46
            LEEF RQGDLEAS G+P SPLC     + A+SQ  FIDF+V P  V
Sbjct:  105 LEEFFRQGDLEASMGLPYSPLCDRHTVHVAESQIGFIDFIVEPTMV 150          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig76169.15610.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTM6_ECTSI6.550e-1877.78Phosphodiesterase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A7S3XSI7_HETAK1.070e-1271.74Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A835Z5P1_9STRA8.230e-1264.44Phosphodiesterase n=1 Tax=Tribonema minus TaxID=30... [more]
D7G4U4_ECTSI1.120e-1160.00Phosphodiesterase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A7E4VQG2_PANRE4.120e-1060.87PDEase domain-containing protein n=1 Tax=Panagrell... [more]
A0A2G9TT39_TELCI4.330e-1060.873'5'-cyclic nucleotide phosphodiesterase (Fragment... [more]
A0A0R3QGT8_9BILA1.130e-958.70PDEase domain-containing protein n=2 Tax=Brugia ti... [more]
A0A6V7TMV6_9BILA1.220e-960.87Phosphodiesterase n=2 Tax=Meloidogyne TaxID=189290... [more]
A0A6V7W380_9BILA1.220e-960.87Phosphodiesterase n=1 Tax=Meloidogyne enterolobii ... [more]
A0A183GLA2_HELPZ1.580e-960.87PDEase domain-containing protein n=2 Tax=Heligmoso... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0020733'5'-cyclic nucleotide phosphodiesterase, catalytic domainPFAMPF00233PDEase_Icoord: 2..44
e-value: 3.6E-9
score: 36.7
IPR0020733'5'-cyclic nucleotide phosphodiesterase, catalytic domainPROSITEPS51845PDEASE_I_2coord: 1..50
score: 14.99
IPR0369713'5'-cyclic nucleotide phosphodiesterase, catalytic domain superfamilyGENE3D1.10.1300.10coord: 1..49
e-value: 1.7E-12
score: 49.2
NoneNo IPR availableSUPERFAMILY109604HD-domain/PDEase-likecoord: 1..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig76169contigH-paniculata_contig76169:335..487 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig76169.15610.1mRNA_H-paniculata_contig76169.15610.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig76169 335..487 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig76169.15610.1 ID=prot_H-paniculata_contig76169.15610.1|Name=mRNA_H-paniculata_contig76169.15610.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=51bp
LEEFHRQGDLEASTGVPISPLCGWEGRNPAKSQCDFIDFVVRPCAVSKYE
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002073PDEase_catalytic_dom
IPR036971PDEase_catalytic_dom_sf