prot_H-paniculata_contig7599.15590.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7599.15590.1
Unique Nameprot_H-paniculata_contig7599.15590.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length184
Homology
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BLAST of mRNA_H-paniculata_contig7599.15590.1 vs. uniprot
Match: D7FP86_ECTSI (Cnd1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP86_ECTSI)

HSP 1 Score: 160 bits (405), Expect = 3.550e-42
Identity = 89/166 (53.61%), Postives = 107/166 (64.46%), Query Frame = 0 
Query:    1 AVLASLDVNEQDAVKALKPWLDCLGKWARLKAPSR---EELWPIMTQPASVVLSKTSDDDESDIDTNNKTQPTPRSSSSTLPLPAHRALLPTLFRLMLLGGAEDVQDSPHRQPAPAAWLAARAYLLMLSLPGAGAYGVLQPAAVGLVLTNLRSWCRNSSVHRGAGG 163
            A LA LD+N+ DA+KAL PW+ CL  W+R    ++   E  W  +TQP + VLS+     E           TP     T PL AH+AL   LFR+MLLG  E+ + SPHR P+PAAW AARAYLLMLSLPGA  YGVLQ A +G+VLTNLRSWCRNS V+R  GG
Sbjct:   38 AALALLDINDDDAIKALGPWIKCLEAWSRKTNAAQGGEEGPWTTVTQPCTAVLSRADPSSE-----------TPXXXXGTPPLAAHKALTVILFRVMLLG--EETEGSPHRNPSPAAWAAARAYLLMLSLPGAAPYGVLQSAVLGMVLTNLRSWCRNSGVYRPGGG 190
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BLAST of mRNA_H-paniculata_contig7599.15590.1 vs. uniprot
Match: A0A6H5JQJ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQJ4_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 1.890e-21
Identity = 50/70 (71.43%), Postives = 57/70 (81.43%), Query Frame = 0 
Query:   94 MLLGGAEDVQDSPHRQPAPAAWLAARAYLLMLSLPGAGAYGVLQPAAVGLVLTNLRSWCRNSSVHRGAGG 163
            MLLG  ++ + SPHR P+PAAW AARAYLLMLSLPGA  YGVLQ A +G+VLTNLRSWCRNS V+R  GG
Sbjct:    1 MLLG--KETEGSPHRNPSPAAWAAARAYLLMLSLPGAAPYGVLQSAVLGMVLTNLRSWCRNSGVYRPGGG 68
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7599.15590.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FP86_ECTSI3.550e-4253.61Cnd1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JQJ4_9PHAE1.890e-2171.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7599contigH-paniculata_contig7599:2595..5543 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7599.15590.1mRNA_H-paniculata_contig7599.15590.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7599 2595..5544 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7599.15590.1 ID=prot_H-paniculata_contig7599.15590.1|Name=mRNA_H-paniculata_contig7599.15590.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=184bp
AVLASLDVNEQDAVKALKPWLDCLGKWARLKAPSREELWPIMTQPASVVL
SKTSDDDESDIDTNNKTQPTPRSSSSTLPLPAHRALLPTLFRLMLLGGAE
DVQDSPHRQPAPAAWLAARAYLLMLSLPGAGAYGVLQPAAVGLVLTNLRS
WCRNSSVHRGAGGSNGGGGGGGGLMAAAKGSQKR
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