prot_H-paniculata_contig7594.15584.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7594.15584.1
Unique Nameprot_H-paniculata_contig7594.15584.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length285
Homology
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BLAST of mRNA_H-paniculata_contig7594.15584.1 vs. uniprot
Match: D8LKX3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKX3_ECTSI)

HSP 1 Score: 162 bits (409), Expect = 1.770e-45
Identity = 108/227 (47.58%), Postives = 139/227 (61.23%), Query Frame = 0 
Query:   63 VHLHRIDLRVEAKVLGGMALGLGSAMAFGAIMGAAVVSFSADEGCRIPLLATVYISAPLSIGDFIAALTFTCLRAQLLRLDSEHFRQHQKRNRP---------DAWESSGDDQFGRVYDVFIFLALAFSVLEMLMFHLGRRRLVETSFYERGLRG---AAVAGGGNLRAGPLRSLLDEEDLREAAWESRGMQNETVQQNCLRQQRYDQLQRLQLEKTKAVLAQHARG 277
            +HL+RI L  E K+LG +AL LGS MA GA+ GAA   FSADEG R+PLL  VY+SAPLS+ D IA +TF   R+++LRLD EH +    R  P         D  ES  D  F R+YD F+ +ALAFSVLE LMF LG RR+   +   R  +G   + V G G      + SLLDEED+R   WE    + +TVQQ  + +QRY+QL+R  LEK + +L +H RG
Sbjct:    1 MHLNRIGLEGEGKLLGSIALVLGSMMAIGALCGAAGTMFSADEGGRLPLLGAVYLSAPLSLADLIAGVTFIVKRSEVLRLDLEHEQSRGGRPHPGPPSPVPGGDDPESQADS-FRRLYDAFLCMALAFSVLEALMFRLGSRRIAANAERHRRAQGFGESLVYGSG------MESLLDEEDVRRNGWED--WRGDTVQQGLMMEQRYEQLRRSNLEKNEGLL-EHTRG 217
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7594.15584.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LKX3_ECTSI1.770e-4547.58Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 192..284
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 66..76
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 45..65
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 173..191
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 133..172
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 100..110
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 111..132
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..44
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 77..99
NoneNo IPR availableTMHMMTMhelixcoord: 170..192
NoneNo IPR availableTMHMMTMhelixcoord: 43..65
NoneNo IPR availableTMHMMTMhelixcoord: 80..102
NoneNo IPR availableTMHMMTMhelixcoord: 109..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7594contigH-paniculata_contig7594:4499..8685 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7594.15584.1mRNA_H-paniculata_contig7594.15584.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7594 2998..8769 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7594.15584.1 ID=prot_H-paniculata_contig7594.15584.1|Name=mRNA_H-paniculata_contig7594.15584.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=285bp
MRSSHFSLLRTPWANNLENNGGRRQIVRFNNSITSHSPTFVPLTVLRGLA
GVAFLCLGEFFWVHLHRIDLRVEAKVLGGMALGLGSAMAFGAIMGAAVVS
FSADEGCRIPLLATVYISAPLSIGDFIAALTFTCLRAQLLRLDSEHFRQH
QKRNRPDAWESSGDDQFGRVYDVFIFLALAFSVLEMLMFHLGRRRLVETS
FYERGLRGAAVAGGGNLRAGPLRSLLDEEDLREAAWESRGMQNETVQQNC
LRQQRYDQLQRLQLEKTKAVLAQHARGGPRNNSL*
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