prot_H-paniculata_contig7455.15436.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7455.15436.1
Unique Nameprot_H-paniculata_contig7455.15436.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length59
Homology
BLAST of mRNA_H-paniculata_contig7455.15436.1 vs. uniprot
Match: B8CGQ2_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CGQ2_THAPS)

HSP 1 Score: 63.5 bits (153), Expect = 2.640e-10
Identity = 34/57 (59.65%), Postives = 39/57 (68.42%), Query Frame = 0
Query:    3 QFDQERPYHVDCTTSRSLCEVKRRRARLVLRWGTTWEALVLFL--FFIFPHQSRVSS 57
            + D ERPYH D T SR L EVK  RARLVLRWGTT E+LVLF   F +F   +R S+
Sbjct:  516 KLDSERPYHSDNTASRLLSEVKHCRARLVLRWGTTLESLVLFFCFFLVFSWGARSSN 572          
BLAST of mRNA_H-paniculata_contig7455.15436.1 vs. uniprot
Match: A0A1D1VIF1_RAMVA (Uncharacterized protein n=1 Tax=Ramazzottius varieornatus TaxID=947166 RepID=A0A1D1VIF1_RAMVA)

HSP 1 Score: 58.5 bits (140), Expect = 1.020e-9
Identity = 28/50 (56.00%), Postives = 33/50 (66.00%), Query Frame = 0
Query:    8 RPYHVDCTTSRSLCEVKRRRARLVLRWGTTWEALVLFLFFIFPHQSRVSS 57
            RPYHV+C+ SRS+ E K RRARLVLRW T WE  VL   F   ++ R  S
Sbjct:   32 RPYHVECSRSRSISEDKLRRARLVLRWVTAWEHRVLQALFFARYRQRTCS 81          
BLAST of mRNA_H-paniculata_contig7455.15436.1 vs. uniprot
Match: A0A0N4TUI9_BRUPA (Uncharacterized protein n=3 Tax=Brugia TaxID=6278 RepID=A0A0N4TUI9_BRUPA)

HSP 1 Score: 46.6 bits (109), Expect = 1.250e-5
Identity = 22/36 (61.11%), Postives = 27/36 (75.00%), Query Frame = 0
Query:    8 RPYHVDCTTSRSLCEVKRRRARLVLRWGTTWEALVL 43
            RPYHV+ TTSR +C+VK+R A LVL   T WE+ VL
Sbjct:    2 RPYHVESTTSRPICQVKQRWAWLVLGSETAWESQVL 37          
BLAST of mRNA_H-paniculata_contig7455.15436.1 vs. uniprot
Match: A0A0N4TUH7_BRUPA (Uncharacterized protein n=1 Tax=Brugia pahangi TaxID=6280 RepID=A0A0N4TUH7_BRUPA)

HSP 1 Score: 46.6 bits (109), Expect = 1.400e-5
Identity = 22/36 (61.11%), Postives = 27/36 (75.00%), Query Frame = 0
Query:    8 RPYHVDCTTSRSLCEVKRRRARLVLRWGTTWEALVL 43
            RPYHV+ TTSR +C+VK+R A LVL   T WE+ VL
Sbjct:    8 RPYHVESTTSRPICQVKQRWAWLVLGSETAWESQVL 43          
BLAST of mRNA_H-paniculata_contig7455.15436.1 vs. uniprot
Match: A8NMS7_BRUMA (Uncharacterized protein n=3 Tax=Brugia TaxID=6278 RepID=A8NMS7_BRUMA)

HSP 1 Score: 46.6 bits (109), Expect = 1.480e-5
Identity = 22/36 (61.11%), Postives = 27/36 (75.00%), Query Frame = 0
Query:    8 RPYHVDCTTSRSLCEVKRRRARLVLRWGTTWEALVL 43
            RPYHV+ TTSR +C+VK+R A LVL   T WE+ VL
Sbjct:   11 RPYHVESTTSRPICQVKQRWAWLVLGSETAWESQVL 46          
BLAST of mRNA_H-paniculata_contig7455.15436.1 vs. uniprot
Match: A0A0N4THB6_BRUPA (Uncharacterized protein n=1 Tax=Brugia pahangi TaxID=6280 RepID=A0A0N4THB6_BRUPA)

HSP 1 Score: 46.6 bits (109), Expect = 1.610e-5
Identity = 21/36 (58.33%), Postives = 27/36 (75.00%), Query Frame = 0
Query:    8 RPYHVDCTTSRSLCEVKRRRARLVLRWGTTWEALVL 43
            RPYHV+ TTSR +C+V++R A LVL   T WE+ VL
Sbjct:   15 RPYHVESTTSRPICQVRQRSAGLVLGSETAWESQVL 50          
BLAST of mRNA_H-paniculata_contig7455.15436.1 vs. uniprot
Match: A0A3P7FTV6_WUCBA (Uncharacterized protein n=1 Tax=Wuchereria bancrofti TaxID=6293 RepID=A0A3P7FTV6_WUCBA)

HSP 1 Score: 45.1 bits (105), Expect = 7.470e-5
Identity = 21/36 (58.33%), Postives = 26/36 (72.22%), Query Frame = 0
Query:    5 DQERPYHVDCTTSRSLCEVKRRRARLVLRWGTTWEA 40
            D  RPYHV+ TTSR +C+VK+R A LVL   T WE+
Sbjct:   15 DSLRPYHVESTTSRPICQVKQRWAWLVLGSETAWES 50          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7455.15436.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
B8CGQ2_THAPS2.640e-1059.65Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A1D1VIF1_RAMVA1.020e-956.00Uncharacterized protein n=1 Tax=Ramazzottius varie... [more]
A0A0N4TUI9_BRUPA1.250e-561.11Uncharacterized protein n=3 Tax=Brugia TaxID=6278 ... [more]
A0A0N4TUH7_BRUPA1.400e-561.11Uncharacterized protein n=1 Tax=Brugia pahangi Tax... [more]
A8NMS7_BRUMA1.480e-561.11Uncharacterized protein n=3 Tax=Brugia TaxID=6278 ... [more]
A0A0N4THB6_BRUPA1.610e-558.33Uncharacterized protein n=1 Tax=Brugia pahangi Tax... [more]
A0A3P7FTV6_WUCBA7.470e-558.33Uncharacterized protein n=1 Tax=Wuchereria bancrof... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013636Domain of unknown function DUF1741PFAMPF08427DUF1741coord: 16..57
e-value: 1.2E-4
score: 21.9
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..29
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 30..49
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 50..59
NoneNo IPR availableTMHMMTMhelixcoord: 30..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7455contigH-paniculata_contig7455:2630..2806 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7455.15436.1mRNA_H-paniculata_contig7455.15436.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7455 2630..2806 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7455.15436.1 ID=prot_H-paniculata_contig7455.15436.1|Name=mRNA_H-paniculata_contig7455.15436.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=59bp
MAQFDQERPYHVDCTTSRSLCEVKRRRARLVLRWGTTWEALVLFLFFIFP
HQSRVSSPL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013636DUF1741