prot_H-paniculata_contig74410.15424.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig74410.15424.1
Unique Nameprot_H-paniculata_contig74410.15424.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length119
Homology
BLAST of mRNA_H-paniculata_contig74410.15424.1 vs. uniprot
Match: A0A0J7KFP4_LASNI (Integrase core domain protein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KFP4_LASNI)

HSP 1 Score: 52.0 bits (123), Expect = 2.840e-5
Identity = 33/95 (34.74%), Postives = 54/95 (56.84%), Query Frame = 0
Query:   13 VALTNQNPTINNGNMWVSDSGASNRMTNNLSKMYALRKPVAGEDVVILGNGSTMVVDLMGKLDLMFHSTIDVPAT----IEVSYLPELNFNLFSL 103
            + +T++ PTINN ++W++DSGAS+ MT+       L      E  V LGN    V+  +GK ++ F + +    T     +V Y+P+++ NLFSL
Sbjct:  153 LTVTSEWPTINNKDVWLADSGASDHMTSREEWFTKLESVGDRERPVTLGNNK--VIFAIGKGEIQFEARVADKITKYTMADVLYVPDISRNLFSL 245          
BLAST of mRNA_H-paniculata_contig74410.15424.1 vs. uniprot
Match: A0A6G0X3B5_9STRA (Integrase catalytic domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X3B5_9STRA)

HSP 1 Score: 50.8 bits (120), Expect = 7.210e-5
Identity = 34/103 (33.01%), Postives = 51/103 (49.51%), Query Frame = 0
Query:   12 PVALTNQNPTINNGNMWVSDSGASNRMTNNLSKMYALRKPVAGEDVVILGNGSTMVVDLMGKLDLMFHSTIDVPATI------EVSYLPELNFNLFSLHKIQE 108
            P  + N +  +   N WV DSGAS+   NN S  +   +P  G  VV   NG  M ++  G +    H  ++ P+ I       VSY+P L +NLFSL ++ +
Sbjct:  281 PDIILNASEALEASNEWVIDSGASDHFCNN-SSWFTNLEPSTG--VVRAANGGDMAIEGCGSI----HLEMNTPSGIVEVELQNVSYMPSLQYNLFSLSRVSQ 376          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig74410.15424.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A0J7KFP4_LASNI2.840e-534.74Integrase core domain protein n=1 Tax=Lasius niger... [more]
A0A6G0X3B5_9STRA7.210e-533.01Integrase catalytic domain-containing protein n=1 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig74410contigH-paniculata_contig74410:250..606 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig74410.15424.1mRNA_H-paniculata_contig74410.15424.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig74410 250..606 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig74410.15424.1 ID=prot_H-paniculata_contig74410.15424.1|Name=mRNA_H-paniculata_contig74410.15424.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=119bp
LDDTEDGECGLPVALTNQNPTINNGNMWVSDSGASNRMTNNLSKMYALRK
PVAGEDVVILGNGSTMVVDLMGKLDLMFHSTIDVPATIEVSYLPELNFNL
FSLHKIQEKQSVLLDASDT
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