prot_H-paniculata_contig743.15414.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig743.15414.1
Unique Nameprot_H-paniculata_contig743.15414.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length138
Homology
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BLAST of mRNA_H-paniculata_contig743.15414.1 vs. uniprot
Match: D8LH89_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH89_ECTSI)

HSP 1 Score: 115 bits (287), Expect = 1.350e-30
Identity = 61/93 (65.59%), Postives = 71/93 (76.34%), Query Frame = 0 
Query:   45 SPSTVRPGSFVAQPVRATSAVVAPKTSMNMGLESLVDLVPAVPAEAHNQLLELVNSPLFLSLKADSFGGLIGPIAGCSAVAAFIVVMAPPRVD 137
            +PS V+ GSF    VRATS +VAPK  M MGLE + D++P VP+EAHN   E+ N+PL LS+ ADSFGGLIGPI GC AVA FIVVMAPPRVD
Sbjct:   22 APSAVKSGSFATPAVRATS-MVAPK--MTMGLEQIADVLPLVPSEAHNAGFEMANNPLLLSVSADSFGGLIGPIGGCLAVAIFIVVMAPPRVD 111
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig743.15414.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LH89_ECTSI1.350e-3065.59Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..110
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 111..132
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 133..137
NoneNo IPR availableTMHMMTMhelixcoord: 110..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig743contigH-paniculata_contig743:31043..31456 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig743.15414.1mRNA_H-paniculata_contig743.15414.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig743 30270..31456 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig743.15414.1 ID=prot_H-paniculata_contig743.15414.1|Name=mRNA_H-paniculata_contig743.15414.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=138bp
MSNSGYRQLHQHSKSSHRWRKEFRQFKTILCNRASFHRAPLRSASPSTVR
PGSFVAQPVRATSAVVAPKTSMNMGLESLVDLVPAVPAEAHNQLLELVNS
PLFLSLKADSFGGLIGPIAGCSAVAAFIVVMAPPRVD*
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