prot_H-paniculata_contig7413.15396.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7413.15396.1
Unique Nameprot_H-paniculata_contig7413.15396.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length52
Homology
BLAST of mRNA_H-paniculata_contig7413.15396.1 vs. uniprot
Match: A0A6H5JJC0_9PHAE (UBC core domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJC0_9PHAE)

HSP 1 Score: 108 bits (269), Expect = 3.850e-26
Identity = 47/52 (90.38%), Postives = 49/52 (94.23%), Query Frame = 0
Query:    1 QVIISGPDDTPYSGGLFAFDIFFPHNYPNVPPKVKLVTTGGGQHRFNPNLYA 52
            QV+ISGPDDTPYSGGLFAFDIFFPHNYP  PPKVKL+TTGGG HRFNPNLYA
Sbjct:  709 QVMISGPDDTPYSGGLFAFDIFFPHNYPQTPPKVKLMTTGGGTHRFNPNLYA 760          
BLAST of mRNA_H-paniculata_contig7413.15396.1 vs. uniprot
Match: D7FMN8_ECTSI (Survivin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMN8_ECTSI)

HSP 1 Score: 104 bits (260), Expect = 6.340e-25
Identity = 46/52 (88.46%), Postives = 48/52 (92.31%), Query Frame = 0
Query:    1 QVIISGPDDTPYSGGLFAFDIFFPHNYPNVPPKVKLVTTGGGQHRFNPNLYA 52
            QV+ISGPDDTPYSGGLFAFDIFFP NYP  PPKVKL+TTGGG HRFNPNLYA
Sbjct: 1079 QVMISGPDDTPYSGGLFAFDIFFPDNYPQTPPKVKLMTTGGGTHRFNPNLYA 1130          
BLAST of mRNA_H-paniculata_contig7413.15396.1 vs. uniprot
Match: A0A7J7PN66_9CHLO (UBC core domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PN66_9CHLO)

HSP 1 Score: 88.6 bits (218), Expect = 3.040e-19
Identity = 38/51 (74.51%), Postives = 43/51 (84.31%), Query Frame = 0
Query:    1 QVIISGPDDTPYSGGLFAFDIFFPHNYPNVPPKVKLVTTGGGQHRFNPNLY 51
            +V+I+GP+DTPY GG F FD+FFP NYPNVPPKV LVTTG G  RFNPNLY
Sbjct:  749 KVLITGPEDTPYGGGCFIFDMFFPPNYPNVPPKVNLVTTGNGGVRFNPNLY 799          
BLAST of mRNA_H-paniculata_contig7413.15396.1 vs. uniprot
Match: A0A835XSW9_9CHLO (UBC core domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XSW9_9CHLO)

HSP 1 Score: 87.8 bits (216), Expect = 5.660e-19
Identity = 38/52 (73.08%), Postives = 42/52 (80.77%), Query Frame = 0
Query:    1 QVIISGPDDTPYSGGLFAFDIFFPHNYPNVPPKVKLVTTGGGQHRFNPNLYA 52
            + II GP+DTPYSGG F FDI+FPH YPN PP+V L TTGGG  RFNPNLYA
Sbjct:  922 KAIIVGPEDTPYSGGCFVFDIYFPHTYPNQPPQVHLQTTGGGTVRFNPNLYA 973          
BLAST of mRNA_H-paniculata_contig7413.15396.1 vs. uniprot
Match: A7S3W2_NEMVE (Predicted protein (Fragment) n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7S3W2_NEMVE)

HSP 1 Score: 83.2 bits (204), Expect = 6.160e-19
Identity = 36/52 (69.23%), Postives = 41/52 (78.85%), Query Frame = 0
Query:    1 QVIISGPDDTPYSGGLFAFDIFFPHNYPNVPPKVKLVTTGGGQHRFNPNLYA 52
            + +++GP DTPYS G F FDIFFP  YPNVPP VKL+TTG G  RFNPNLYA
Sbjct:   18 RALVTGPVDTPYSRGCFVFDIFFPGTYPNVPPLVKLITTGNGTVRFNPNLYA 69          
BLAST of mRNA_H-paniculata_contig7413.15396.1 vs. uniprot
Match: A0A8J4LPR0_9CHLO (UBC core domain-containing protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4LPR0_9CHLO)

HSP 1 Score: 85.1 bits (209), Expect = 1.040e-18
Identity = 35/52 (67.31%), Postives = 43/52 (82.69%), Query Frame = 0
Query:    1 QVIISGPDDTPYSGGLFAFDIFFPHNYPNVPPKVKLVTTGGGQHRFNPNLYA 52
            + +I GP+DTPYSGG F FD++FP  YPN PP+V L+TTGGG+ RFNPNLYA
Sbjct:   81 KALIVGPEDTPYSGGCFVFDLYFPPQYPNAPPQVHLMTTGGGRVRFNPNLYA 132          
BLAST of mRNA_H-paniculata_contig7413.15396.1 vs. uniprot
Match: A0A5J4T695_9EUKA (UBC core domain-containing protein (Fragment) n=1 Tax=Streblomastix strix TaxID=222440 RepID=A0A5J4T695_9EUKA)

HSP 1 Score: 79.3 bits (194), Expect = 1.430e-18
Identity = 33/49 (67.35%), Postives = 37/49 (75.51%), Query Frame = 0
Query:    3 IISGPDDTPYSGGLFAFDIFFPHNYPNVPPKVKLVTTGGGQHRFNPNLY 51
            ++ GP  TPY GGLF FDI FP  YP  PPKV++VTTGGG  RFNPNLY
Sbjct:    2 LVVGPQSTPYEGGLFEFDILFPQQYPTTPPKVEIVTTGGGAVRFNPNLY 50          
BLAST of mRNA_H-paniculata_contig7413.15396.1 vs. uniprot
Match: A0A383V5Q2_TETOB (UBC core domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383V5Q2_TETOB)

HSP 1 Score: 86.7 bits (213), Expect = 1.440e-18
Identity = 36/51 (70.59%), Postives = 41/51 (80.39%), Query Frame = 0
Query:    1 QVIISGPDDTPYSGGLFAFDIFFPHNYPNVPPKVKLVTTGGGQHRFNPNLY 51
            + +I+GP+DTPY GG F FD+FFP NYPN PPKV LVTTG G  RFNPNLY
Sbjct:  842 KALITGPEDTPYGGGCFVFDMFFPPNYPNAPPKVNLVTTGNGSVRFNPNLY 892          
BLAST of mRNA_H-paniculata_contig7413.15396.1 vs. uniprot
Match: A0A6G0UKE8_9BILA (UBC core domain-containing protein n=1 Tax=Halicephalobus sp. NKZ332 TaxID=2598192 RepID=A0A6G0UKE8_9BILA)

HSP 1 Score: 86.7 bits (213), Expect = 1.440e-18
Identity = 35/52 (67.31%), Postives = 44/52 (84.62%), Query Frame = 0
Query:    1 QVIISGPDDTPYSGGLFAFDIFFPHNYPNVPPKVKLVTTGGGQHRFNPNLYA 52
            +V+I+GP+DTPY+ G+F FD+FFP NYPNVPPK + +TTG G  RFNPNLYA
Sbjct:  405 KVLITGPEDTPYANGIFEFDVFFPSNYPNVPPKCQFLTTGNGTVRFNPNLYA 456          
BLAST of mRNA_H-paniculata_contig7413.15396.1 vs. uniprot
Match: A0A8J4B7U6_9CHLO (UBC core domain-containing protein n=2 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4B7U6_9CHLO)

HSP 1 Score: 86.3 bits (212), Expect = 1.970e-18
Identity = 36/52 (69.23%), Postives = 44/52 (84.62%), Query Frame = 0
Query:    1 QVIISGPDDTPYSGGLFAFDIFFPHNYPNVPPKVKLVTTGGGQHRFNPNLYA 52
            + +I GP+DTPYSGG F FD++FP  YPNVPP+V L+TTGGG+ RFNPNLYA
Sbjct:  779 KALIVGPEDTPYSGGCFVFDMYFPPQYPNVPPQVHLMTTGGGRVRFNPNLYA 830          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7413.15396.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJC0_9PHAE3.850e-2690.38UBC core domain-containing protein n=1 Tax=Ectocar... [more]
D7FMN8_ECTSI6.340e-2588.46Survivin n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
A0A7J7PN66_9CHLO3.040e-1974.51UBC core domain-containing protein n=1 Tax=Scenede... [more]
A0A835XSW9_9CHLO5.660e-1973.08UBC core domain-containing protein n=1 Tax=Edaphoc... [more]
A7S3W2_NEMVE6.160e-1969.23Predicted protein (Fragment) n=1 Tax=Nematostella ... [more]
A0A8J4LPR0_9CHLO1.040e-1867.31UBC core domain-containing protein n=1 Tax=Volvox ... [more]
A0A5J4T695_9EUKA1.430e-1867.35UBC core domain-containing protein (Fragment) n=1 ... [more]
A0A383V5Q2_TETOB1.440e-1870.59UBC core domain-containing protein n=1 Tax=Tetrade... [more]
A0A6G0UKE8_9BILA1.440e-1867.31UBC core domain-containing protein n=1 Tax=Halicep... [more]
A0A8J4B7U6_9CHLO1.970e-1869.23UBC core domain-containing protein n=2 Tax=Volvox ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 1..51
e-value: 3.3E-14
score: 52.7
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBIQUITIN_CONJUGAT_2coord: 1..52
score: 15.656
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10coord: 1..52
e-value: 1.0E-22
score: 82.7
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 2..51
NoneNo IPR availablePANTHERPTHR46116:SF6BACULOVIRAL IAP REPEAT-CONTAINING PROTEIN 6-RELATEDcoord: 2..52
NoneNo IPR availablePANTHERPTHR46116FAMILY NOT NAMEDcoord: 2..52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7413contigH-paniculata_contig7413:323..478 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7413.15396.1mRNA_H-paniculata_contig7413.15396.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7413 323..478 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7413.15396.1 ID=prot_H-paniculata_contig7413.15396.1|Name=mRNA_H-paniculata_contig7413.15396.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=52bp
QVIISGPDDTPYSGGLFAFDIFFPHNYPNVPPKVKLVTTGGGQHRFNPNL
YA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000608UBQ-conjugat_E2
IPR016135UBQ-conjugating_enzyme/RWD