prot_H-paniculata_contig7406.15382.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7406.15382.1
Unique Nameprot_H-paniculata_contig7406.15382.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length82
Homology
BLAST of mRNA_H-paniculata_contig7406.15382.1 vs. uniprot
Match: A0A6H5KL34_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL34_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 5.750e-19
Identity = 37/51 (72.55%), Postives = 41/51 (80.39%), Query Frame = 0
Query:   17 LGFTGVVSSADVTRIKWDCCPCSVARSYTGKEGFATIAYQATVDHSGRVLA 67
            LGFTG + S DVT I+W CCP S AR YTGKEGF +IAYQA VDH+GRVLA
Sbjct:   15 LGFTGAIGSTDVTHIRWACCPYSWARQYTGKEGFPSIAYQAIVDHTGRVLA 65          
BLAST of mRNA_H-paniculata_contig7406.15382.1 vs. uniprot
Match: A0A6H5JBS8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBS8_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 4.420e-17
Identity = 34/54 (62.96%), Postives = 41/54 (75.93%), Query Frame = 0
Query:   17 LGFTGVVSSADVTRIKWDCCPCSVARSYTGKEGFATIAYQATVDHSGRVLAVTT 70
            LG TG + S DVT I W  CP ++ RSYTGKEGF TIAYQ TVDH+GR +A+T+
Sbjct:   27 LGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITS 80          
BLAST of mRNA_H-paniculata_contig7406.15382.1 vs. uniprot
Match: A0A6H5J792_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J792_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 6.340e-17
Identity = 36/53 (67.92%), Postives = 41/53 (77.36%), Query Frame = 0
Query:   17 LGFTGVVSSADVTRIKWDCCPCSVARSYTGKEGFATIAYQATVDHSGRVLAVT 69
            LGFTG + S DVT I+W  CP S AR YTGKEG  +IAYQA VDH+GR+LAVT
Sbjct:    7 LGFTGAIGSTDVTHIRWAFCPYSWARQYTGKEGLPSIAYQAIVDHTGRILAVT 59          
BLAST of mRNA_H-paniculata_contig7406.15382.1 vs. uniprot
Match: A0A6H5JG32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG32_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 7.740e-17
Identity = 34/54 (62.96%), Postives = 41/54 (75.93%), Query Frame = 0
Query:   17 LGFTGVVSSADVTRIKWDCCPCSVARSYTGKEGFATIAYQATVDHSGRVLAVTT 70
            LG TG + S DVT I W  CP ++ RSYTGKEGF TIAYQ TVDH+GR +A+T+
Sbjct:    7 LGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITS 60          
BLAST of mRNA_H-paniculata_contig7406.15382.1 vs. uniprot
Match: A0A6H5KVT5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVT5_9PHAE)

HSP 1 Score: 77.4 bits (189), Expect = 2.310e-16
Identity = 36/53 (67.92%), Postives = 41/53 (77.36%), Query Frame = 0
Query:   17 LGFTGVVSSADVTRIKWDCCPCSVARSYTGKEGFATIAYQATVDHSGRVLAVT 69
            LGFTG + S DVT I+W CCP S AR YTGKEGF +IAYQA V+ +G VLAVT
Sbjct:    7 LGFTGAIGSTDVTHIRWACCPYSWARQYTGKEGFPSIAYQAIVNDTGLVLAVT 59          
BLAST of mRNA_H-paniculata_contig7406.15382.1 vs. uniprot
Match: A0A6H5K6N4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6N4_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 2.640e-16
Identity = 34/54 (62.96%), Postives = 41/54 (75.93%), Query Frame = 0
Query:   17 LGFTGVVSSADVTRIKWDCCPCSVARSYTGKEGFATIAYQATVDHSGRVLAVTT 70
            LG TG + S DVT I W  CP ++ RSYTGKEGF TIAYQ TVDH+GR +A+T+
Sbjct:   69 LGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITS 122          
BLAST of mRNA_H-paniculata_contig7406.15382.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 3.470e-16
Identity = 38/53 (71.70%), Postives = 41/53 (77.36%), Query Frame = 0
Query:   17 LGFTGVVSSADVTRIKWDCCPCSVARSYTGKEGFATIAYQATVDHSGRVLAVT 69
            LGFTG V S DVT I W  CP + ARSYTGKEGF TIAYQ TVDH+GR +AVT
Sbjct:  153 LGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVT 205          
BLAST of mRNA_H-paniculata_contig7406.15382.1 vs. uniprot
Match: A0A6H5KQK3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQK3_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 8.820e-16
Identity = 35/53 (66.04%), Postives = 39/53 (73.58%), Query Frame = 0
Query:   17 LGFTGVVSSADVTRIKWDCCPCSVARSYTGKEGFATIAYQATVDHSGRVLAVT 69
            L F G + S DVT I+W CCP S AR Y GKEGF +IAYQA VDH+G VLAVT
Sbjct:    8 LEFAGAIRSTDVTHIRWACCPYSWARQYMGKEGFPSIAYQAIVDHTGHVLAVT 60          
BLAST of mRNA_H-paniculata_contig7406.15382.1 vs. uniprot
Match: A0A6H5KH50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH50_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 1.130e-15
Identity = 34/54 (62.96%), Postives = 41/54 (75.93%), Query Frame = 0
Query:   17 LGFTGVVSSADVTRIKWDCCPCSVARSYTGKEGFATIAYQATVDHSGRVLAVTT 70
            LG TG + S DVT I W  CP ++ RSYTGKEGF TIAYQ TVDH+GR +A+T+
Sbjct:   69 LGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITS 122          
BLAST of mRNA_H-paniculata_contig7406.15382.1 vs. uniprot
Match: A0A6H5KEF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEF0_9PHAE)

HSP 1 Score: 77.4 bits (189), Expect = 2.380e-15
Identity = 34/53 (64.15%), Postives = 41/53 (77.36%), Query Frame = 0
Query:   17 LGFTGVVSSADVTRIKWDCCPCSVARSYTGKEGFATIAYQATVDHSGRVLAVT 69
            LG+TG   S DVT I W+ CP ++ RS+TGKEGF TIAY+ TVDH+GR LAVT
Sbjct:  130 LGYTGACGSTDVTHIDWNMCPFTLGRSFTGKEGFPTIAYEVTVDHAGRALAVT 182          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7406.15382.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KL34_9PHAE5.750e-1972.55Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JBS8_9PHAE4.420e-1762.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J792_9PHAE6.340e-1767.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JG32_9PHAE7.740e-1762.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KVT5_9PHAE2.310e-1667.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K6N4_9PHAE2.640e-1662.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNX4_9PHAE3.470e-1671.70DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KQK3_9PHAE8.820e-1666.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KH50_9PHAE1.130e-1562.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KEF0_9PHAE2.380e-1564.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 15..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..26
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..82
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7406contigH-paniculata_contig7406:10365..10610 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7406.15382.1mRNA_H-paniculata_contig7406.15382.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7406 10335..10610 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7406.15382.1 ID=prot_H-paniculata_contig7406.15382.1|Name=mRNA_H-paniculata_contig7406.15382.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=82bp
MSISSCRRGRLSRRLCLGFTGVVSSADVTRIKWDCCPCSVARSYTGKEGF
ATIAYQATVDHSGRVLAVTTWRCRWFVRIPCI
back to top