prot_H-paniculata_contig73863.15357.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig73863.15357.1
Unique Name	prot_H-paniculata_contig73863.15357.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	44

Homology

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BLAST of mRNA_H-paniculata_contig73863.15357.1 vs. uniprot
Match: A0A835YVZ5_9STRA (tRNA-5-taurinomethyluridine 2-sulfurtransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVZ5_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 7.800e-6
Identity = 24/39 (61.54%), Postives = 27/39 (69.23%), Query Frame = 0

Query:    1 MRNWDRSDEEGEEACPADNDLKDAQKVGEHLGIPVKTVS 39
            MRNWDRSDEEG EAC AD D  D Q+V   L IP  +V+
Sbjct:   26 MRNWDRSDEEGREACTADADWADVQRVCRQLQIPCHSVN 64

[Close]

BLAST of mRNA_H-paniculata_contig73863.15357.1 vs. uniprot
Match: A0A2D4C2Y6_PYTIN (tRNA-5-taurinomethyluridine 2-sulfurtransferase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C2Y6_PYTIN)

HSP 1 Score: 50.1 bits (118), Expect = 7.820e-6
Identity = 22/39 (56.41%), Postives = 28/39 (71.79%), Query Frame = 0

Query:    1 MRNWDRSDEEGEEACPADNDLKDAQKVGEHLGIPVKTVS 39
            M+NWD SDE GE+ACP D + +D QKV  HLGI  + V+
Sbjct:  335 MKNWDASDEIGEQACPQDLEFQDVQKVCRHLGIEARRVN 373

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig73863.15357.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig73863.15357.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A835YVZ5_9STRA	7.800e-6	61.54	tRNA-5-taurinomethyluridine 2-sulfurtransferase n=...	[more]
A0A2D4C2Y6_PYTIN	7.820e-6	56.41	tRNA-5-taurinomethyluridine 2-sulfurtransferase n=...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	3.40.50.620		coord: 1..40 e-value: 6.4E-6 score: 27.8
None	No IPR available	PFAM	PF03054	tRNA_Me_trans	coord: 1..39 e-value: 1.7E-6 score: 27.1

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig73863	contig	H-paniculata_contig73863:256..387 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig73863.15357.1	mRNA_H-paniculata_contig73863.15357.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig73863 256..414 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig73863.15357.1 ID=prot_H-paniculata_contig73863.15357.1|Name=mRNA_H-paniculata_contig73863.15357.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=44bp
MRNWDRSDEEGEEACPADNDLKDAQKVGEHLGIPVKTVSGWVS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR014729	Rossmann-like_a/b/a_fold