mRNA_H-paniculata_contig73863.15357.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig73863.15357.1 vs. uniprot
Match: I0YQI7_COCSC (tRNA-5-taurinomethyluridine 2-sulfurtransferase n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YQI7_COCSC) HSP 1 Score: 71.2 bits (173), Expect = 3.710e-13 Identity = 30/44 (68.18%), Postives = 35/44 (79.55%), Query Frame = 1
Query: 1 QGHDVVGVFMRNWDRSDEEGEEACPADNDLKDAQKVGEHLGIPV 132
QGHDVVGVFMRNWD ++E G+ AC AD D DAQ+V HLGIP+
Sbjct: 45 QGHDVVGVFMRNWDEAEERGDSACSADADWTDAQRVAAHLGIPI 88
BLAST of mRNA_H-paniculata_contig73863.15357.1 vs. uniprot
Match: A0A5A8C4H8_CAFRO (tRNA-5-taurinomethyluridine 2-sulfurtransferase n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C4H8_CAFRO) HSP 1 Score: 71.2 bits (173), Expect = 3.880e-13 Identity = 30/44 (68.18%), Postives = 35/44 (79.55%), Query Frame = 1
Query: 1 QGHDVVGVFMRNWDRSDEEGEEACPADNDLKDAQKVGEHLGIPV 132
QGHDVVGVFMRNWD +DE G+ CP D DL+ AQ V +HLGIP+
Sbjct: 54 QGHDVVGVFMRNWDSADEAGQAVCPQDADLESAQAVAQHLGIPL 97
BLAST of mRNA_H-paniculata_contig73863.15357.1 vs. uniprot
Match: A0A5A8BZC9_CAFRO (tRNA-5-taurinomethyluridine 2-sulfurtransferase n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8BZC9_CAFRO) HSP 1 Score: 71.2 bits (173), Expect = 3.940e-13 Identity = 30/44 (68.18%), Postives = 35/44 (79.55%), Query Frame = 1
Query: 1 QGHDVVGVFMRNWDRSDEEGEEACPADNDLKDAQKVGEHLGIPV 132
QGHDVVGVFMRNWD +DE G+ CP D DL+ AQ V +HLGIP+
Sbjct: 54 QGHDVVGVFMRNWDSADEAGQAVCPQDADLESAQAVAQHLGIPL 97
BLAST of mRNA_H-paniculata_contig73863.15357.1 vs. uniprot
Match: A0A024GML0_9STRA (tRNA-5-taurinomethyluridine 2-sulfurtransferase n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GML0_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 1.650e-11 Identity = 28/48 (58.33%), Postives = 35/48 (72.92%), Query Frame = 1
Query: 1 QGHDVVGVFMRNWDRSDEEGEEACPADNDLKDAQKVGEHLGIPVKTVS 144
QGH V GV+M+NWD SDE G + CP D DL+D Q V E LGIP++T +
Sbjct: 50 QGHKVTGVYMKNWDSSDEVGTQCCPQDQDLQDVQLVCEQLGIPLRTTN 97
BLAST of mRNA_H-paniculata_contig73863.15357.1 vs. uniprot
Match: A0A8J9REA9_9CHLO (tRNA-specific 2-thiouridylase MnmA n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9REA9_9CHLO) HSP 1 Score: 64.3 bits (155), Expect = 1.080e-10 Identity = 27/44 (61.36%), Postives = 32/44 (72.73%), Query Frame = 1
Query: 1 QGHDVVGVFMRNWDRSDEEGEEACPADNDLKDAQKVGEHLGIPV 132
QGH+V+GVFMRNWD S+E GE AC A+ D AQ V HL IP+
Sbjct: 33 QGHEVIGVFMRNWDESEERGESACSAEADWNAAQTVANHLSIPI 76
BLAST of mRNA_H-paniculata_contig73863.15357.1 vs. uniprot
Match: F0WRA3_9STRA (tRNA-5-taurinomethyluridine 2-sulfurtransferase n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WRA3_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 1.080e-10 Identity = 27/48 (56.25%), Postives = 33/48 (68.75%), Query Frame = 1
Query: 1 QGHDVVGVFMRNWDRSDEEGEEACPADNDLKDAQKVGEHLGIPVKTVS 144
QGH V GV+M+NWD SDE G + CP D DLKD Q V + L IP+ T +
Sbjct: 50 QGHKVTGVYMKNWDSSDEVGAQCCPQDQDLKDVQSVCKQLDIPIHTTN 97
BLAST of mRNA_H-paniculata_contig73863.15357.1 vs. uniprot
Match: D0ND99_PHYIT (tRNA-5-taurinomethyluridine 2-sulfurtransferase n=3 Tax=Phytophthora TaxID=4783 RepID=D0ND99_PHYIT) HSP 1 Score: 63.9 bits (154), Expect = 1.460e-10 Identity = 28/48 (58.33%), Postives = 35/48 (72.92%), Query Frame = 1
Query: 1 QGHDVVGVFMRNWDRSDEEGEEACPADNDLKDAQKVGEHLGIPVKTVS 144
QG+ V GV+M+NWD SDEEGE ACP D++ D QKV E LGI + V+
Sbjct: 17 QGYHVTGVYMKNWDPSDEEGESACPVDSEYVDVQKVCEQLGIEAQMVN 64
BLAST of mRNA_H-paniculata_contig73863.15357.1 vs. uniprot
Match: W2QT47_PHYPN (tRNA-5-taurinomethyluridine 2-sulfurtransferase n=10 Tax=Phytophthora TaxID=4783 RepID=W2QT47_PHYPN) HSP 1 Score: 63.9 bits (154), Expect = 1.480e-10 Identity = 28/48 (58.33%), Postives = 35/48 (72.92%), Query Frame = 1
Query: 1 QGHDVVGVFMRNWDRSDEEGEEACPADNDLKDAQKVGEHLGIPVKTVS 144
QG+ V GV+M+NWD SDEEGE ACP D++ D QKV E LGI + V+
Sbjct: 75 QGYHVTGVYMKNWDPSDEEGESACPVDSEYLDVQKVCEQLGIEAQMVN 122
BLAST of mRNA_H-paniculata_contig73863.15357.1 vs. uniprot
Match: A0A835YVZ5_9STRA (tRNA-5-taurinomethyluridine 2-sulfurtransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVZ5_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 1.900e-10 Identity = 30/48 (62.50%), Postives = 34/48 (70.83%), Query Frame = 1
Query: 1 QGHDVVGVFMRNWDRSDEEGEEACPADNDLKDAQKVGEHLGIPVKTVS 144
QG+DVV V MRNWDRSDEEG EAC AD D D Q+V L IP +V+
Sbjct: 17 QGYDVVAVHMRNWDRSDEEGREACTADADWADVQRVCRQLQIPCHSVN 64
BLAST of mRNA_H-paniculata_contig73863.15357.1 vs. uniprot
Match: H3G702_PHYRM (tRNA-5-taurinomethyluridine 2-sulfurtransferase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G702_PHYRM) HSP 1 Score: 63.5 bits (153), Expect = 1.910e-10 Identity = 28/48 (58.33%), Postives = 35/48 (72.92%), Query Frame = 1
Query: 1 QGHDVVGVFMRNWDRSDEEGEEACPADNDLKDAQKVGEHLGIPVKTVS 144
QG+ V GV+M+NWD SDEEGE ACP D++ D QKV E LGI + V+
Sbjct: 26 QGYRVTGVYMKNWDPSDEEGESACPVDSEYLDVQKVCEQLGIEAQMVN 73 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig73863.15357.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig73863.15357.1 >prot_H-paniculata_contig73863.15357.1 ID=prot_H-paniculata_contig73863.15357.1|Name=mRNA_H-paniculata_contig73863.15357.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=44bp MRNWDRSDEEGEEACPADNDLKDAQKVGEHLGIPVKTVSGWVS*back to top mRNA from alignment at H-paniculata_contig73863:256..414- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig73863.15357.1 ID=mRNA_H-paniculata_contig73863.15357.1|Name=mRNA_H-paniculata_contig73863.15357.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=159bp|location=Sequence derived from alignment at H-paniculata_contig73863:256..414- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig73863:256..414- >mRNA_H-paniculata_contig73863.15357.1 ID=mRNA_H-paniculata_contig73863.15357.1|Name=mRNA_H-paniculata_contig73863.15357.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=264bp|location=Sequence derived from alignment at H-paniculata_contig73863:256..414- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |