prot_H-paniculata_contig73631.15332.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig73631.15332.1
Unique Nameprot_H-paniculata_contig73631.15332.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length135
Homology
BLAST of mRNA_H-paniculata_contig73631.15332.1 vs. uniprot
Match: A0A0R6LUT7_UNDPI (50S ribosomal protein L5, chloroplastic n=24 Tax=Phaeophyceae TaxID=2870 RepID=A0A0R6LUT7_UNDPI)

HSP 1 Score: 249 bits (635), Expect = 1.530e-82
Identity = 126/134 (94.03%), Postives = 132/134 (98.51%), Query Frame = 0
Query:    1 NNKTLQKSVEEVRLITGQQPILTKAKKSIASFKVREEMILGITVTLRNKKMYAFLEKLIHIVLPRIRDFRGLSLKGFDRNGNYNFGLKEQLVFPEISYENVDQIKGFNISIVTTAKTKNEGIALLKEFGFPLTD 134
            NNKTLQKSV+E+RLITGQQPILTKAKKSIA FKVREEM+LGITVTLR+KKMYAFLEKLIH+VLPRIRDFRGLSLKGFDRNGNYNFGLKEQLVFPEISYENVDQIKGFNISIVTTA+TK EGIALLKEFGFPLTD
Sbjct:   54 NNKTLQKSVDEMRLITGQQPILTKAKKSIAGFKVREEMVLGITVTLRSKKMYAFLEKLIHLVLPRIRDFRGLSLKGFDRNGNYNFGLKEQLVFPEISYENVDQIKGFNISIVTTAQTKIEGIALLKEFGFPLTD 187          
BLAST of mRNA_H-paniculata_contig73631.15332.1 vs. uniprot
Match: A0A1I9LVU6_9PHAE (50S ribosomal protein L5, chloroplastic n=14 Tax=Phaeophyceae TaxID=2870 RepID=A0A1I9LVU6_9PHAE)

HSP 1 Score: 245 bits (626), Expect = 3.600e-81
Identity = 124/133 (93.23%), Postives = 129/133 (96.99%), Query Frame = 0
Query:    1 NNKTLQKSVEEVRLITGQQPILTKAKKSIASFKVREEMILGITVTLRNKKMYAFLEKLIHIVLPRIRDFRGLSLKGFDRNGNYNFGLKEQLVFPEISYENVDQIKGFNISIVTTAKTKNEGIALLKEFGFPLT 133
            NNKTLQKS+EE+RLI+GQQPILTKAKKSIA FKVREEM LGITVTLR+ KMYAFLEKLIH+VLPRIRDFRGLSLKGFDRNGNYNFGLKEQLVFPEISYENVDQIKG NISIVTTAKTKNEGIALLKEFGFPLT
Sbjct:   54 NNKTLQKSIEEIRLISGQQPILTKAKKSIAGFKVREEMTLGITVTLRSTKMYAFLEKLIHLVLPRIRDFRGLSLKGFDRNGNYNFGLKEQLVFPEISYENVDQIKGLNISIVTTAKTKNEGIALLKEFGFPLT 186          
BLAST of mRNA_H-paniculata_contig73631.15332.1 vs. uniprot
Match: A0A8F0F770_9PHAE (50S ribosomal protein L5, chloroplastic n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F770_9PHAE)

HSP 1 Score: 242 bits (618), Expect = 5.960e-80
Identity = 120/134 (89.55%), Postives = 128/134 (95.52%), Query Frame = 0
Query:    1 NNKTLQKSVEEVRLITGQQPILTKAKKSIASFKVREEMILGITVTLRNKKMYAFLEKLIHIVLPRIRDFRGLSLKGFDRNGNYNFGLKEQLVFPEISYENVDQIKGFNISIVTTAKTKNEGIALLKEFGFPLTD 134
            NNKTLQKS++E+RLITGQQPILTKAKKSIA FKVREEM LG+TVTLRN KMY FLEKL+H+VLPRIRDFRGLS KGFDR GNYNFGL+EQLVFPEI+YENVDQIKGFNISIVTTAKTKNEGIALLKEFGFPLTD
Sbjct:   54 NNKTLQKSIDEIRLITGQQPILTKAKKSIAGFKVREEMNLGVTVTLRNNKMYTFLEKLVHLVLPRIRDFRGLSSKGFDREGNYNFGLQEQLVFPEINYENVDQIKGFNISIVTTAKTKNEGIALLKEFGFPLTD 187          
BLAST of mRNA_H-paniculata_contig73631.15332.1 vs. uniprot
Match: A0A2R4QQ29_9PHAE (50S ribosomal protein L5, chloroplastic n=3 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QQ29_9PHAE)

HSP 1 Score: 240 bits (613), Expect = 3.440e-79
Identity = 119/132 (90.15%), Postives = 129/132 (97.73%), Query Frame = 0
Query:    1 NNKTLQKSVEEVRLITGQQPILTKAKKSIASFKVREEMILGITVTLRNKKMYAFLEKLIHIVLPRIRDFRGLSLKGFDRNGNYNFGLKEQLVFPEISYENVDQIKGFNISIVTTAKTKNEGIALLKEFGFPL 132
            NNK LQKS+EE+RLITGQQPI+TKAKKSIA FKVREEMILG+TVTLRNKKMYAFLEKLIH+VLPRIRDFRGLSLKGFDRNGNYNFGLKEQLVFPEISY++VDQ+KG NISIVTTA+TK+EGIALLKEFGFPL
Sbjct:   54 NNKILQKSIEEIRLITGQQPIVTKAKKSIAGFKVREEMILGVTVTLRNKKMYAFLEKLIHLVLPRIRDFRGLSLKGFDRNGNYNFGLKEQLVFPEISYDSVDQVKGLNISIVTTAQTKSEGIALLKEFGFPL 185          
BLAST of mRNA_H-paniculata_contig73631.15332.1 vs. uniprot
Match: A0A141BSM9_9PHAE (50S ribosomal protein L5, chloroplastic n=14 Tax=Sargassaceae TaxID=3014 RepID=A0A141BSM9_9PHAE)

HSP 1 Score: 239 bits (609), Expect = 1.400e-78
Identity = 116/134 (86.57%), Postives = 128/134 (95.52%), Query Frame = 0
Query:    1 NNKTLQKSVEEVRLITGQQPILTKAKKSIASFKVREEMILGITVTLRNKKMYAFLEKLIHIVLPRIRDFRGLSLKGFDRNGNYNFGLKEQLVFPEISYENVDQIKGFNISIVTTAKTKNEGIALLKEFGFPLTD 134
            NNK LQKS+EE+R+ITGQ PI+TKAK SIA FKVREEM+LG+TVTLRNKKMYAFLEKLIH+VLPRIRDFRGLSLKGFDRNGNYNFGLKEQLVFPEI+YENVDQI+G NISIVTTAKTK+EG+ALLKEFGFPL +
Sbjct:   54 NNKILQKSIEEIRIITGQHPIITKAKNSIAGFKVREEMVLGVTVTLRNKKMYAFLEKLIHLVLPRIRDFRGLSLKGFDRNGNYNFGLKEQLVFPEINYENVDQIRGLNISIVTTAKTKSEGVALLKEFGFPLNE 187          
BLAST of mRNA_H-paniculata_contig73631.15332.1 vs. uniprot
Match: A0A8E6D6M4_9PHAE (50S ribosomal protein L5, chloroplastic n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E6D6M4_9PHAE)

HSP 1 Score: 235 bits (599), Expect = 4.670e-77
Identity = 114/134 (85.07%), Postives = 128/134 (95.52%), Query Frame = 0
Query:    1 NNKTLQKSVEEVRLITGQQPILTKAKKSIASFKVREEMILGITVTLRNKKMYAFLEKLIHIVLPRIRDFRGLSLKGFDRNGNYNFGLKEQLVFPEISYENVDQIKGFNISIVTTAKTKNEGIALLKEFGFPLTD 134
            N+K LQKSV+E+RLITGQQPI+TKAKKSIA FKVRE+MILG+TVTLRN KMY FLEKLIH+VLPRIRDFRGLSLKGFDR GNYNFGL+EQL FPEI+YE++DQ++GFNISIVTTAKT+NEGIALLKEFGFPLTD
Sbjct:   54 NSKILQKSVDEIRLITGQQPIITKAKKSIAGFKVREDMILGVTVTLRNSKMYIFLEKLIHLVLPRIRDFRGLSLKGFDREGNYNFGLREQLAFPEINYESIDQLRGFNISIVTTAKTRNEGIALLKEFGFPLTD 187          
BLAST of mRNA_H-paniculata_contig73631.15332.1 vs. uniprot
Match: A0A2I4Q2J9_9PHAE (50S ribosomal protein L5, chloroplastic n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2J9_9PHAE)

HSP 1 Score: 224 bits (572), Expect = 6.020e-73
Identity = 113/134 (84.33%), Postives = 122/134 (91.04%), Query Frame = 0
Query:    1 NNKTLQKSVEEVRLITGQQPILTKAKKSIASFKVREEMILGITVTLRNKKMYAFLEKLIHIVLPRIRDFRGLSLKGFDRNGNYNFGLKEQLVFPEISYENVDQIKGFNISIVTTAKTKNEGIALLKEFGFPLTD 134
            NNK LQKSV+E+RLITGQQP+LTKAKKSIA FKVRE M LGITVTLR  KMY FLEKLIH+VLPRIRDFRGLS K FDRNGNY+FGL+EQLVFPEISYENVDQI+G NISIVTTAKT+ EGIALLKEFGFPL +
Sbjct:   54 NNKLLQKSVDEIRLITGQQPVLTKAKKSIAGFKVREHMTLGITVTLRQTKMYTFLEKLIHLVLPRIRDFRGLSTKNFDRNGNYHFGLQEQLVFPEISYENVDQIRGLNISIVTTAKTQAEGIALLKEFGFPLIE 187          
BLAST of mRNA_H-paniculata_contig73631.15332.1 vs. uniprot
Match: A0A7S6ZPC4_9STRA (50S ribosomal protein L5, chloroplastic n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6ZPC4_9STRA)

HSP 1 Score: 215 bits (548), Expect = 2.990e-69
Identity = 104/134 (77.61%), Postives = 122/134 (91.04%), Query Frame = 0
Query:    1 NNKTLQKSVEEVRLITGQQPILTKAKKSIASFKVREEMILGITVTLRNKKMYAFLEKLIHIVLPRIRDFRGLSLKGFDRNGNYNFGLKEQLVFPEISYENVDQIKGFNISIVTTAKTKNEGIALLKEFGFPLTD 134
            NN  LQKSV E+R+++GQQPI+TKAKKSIA FK+REEM LG+TVTLR  KMY FLEKLIH+VLPR+RDFRGLS KGFD+ GNYNFGL+EQLVFPEI+Y++VD+ +GFNISIVTTAKTK+EGI+LLKEFGFPL D
Sbjct:   57 NNSILQKSVNEIRIVSGQQPIITKAKKSIAGFKIREEMNLGVTVTLRKLKMYDFLEKLIHLVLPRVRDFRGLSTKGFDKFGNYNFGLQEQLVFPEINYDDVDKTRGFNISIVTTAKTKDEGISLLKEFGFPLVD 190          
BLAST of mRNA_H-paniculata_contig73631.15332.1 vs. uniprot
Match: B7T1X2_VAULI (50S ribosomal protein L5, chloroplastic n=1 Tax=Vaucheria litorea TaxID=109269 RepID=B7T1X2_VAULI)

HSP 1 Score: 211 bits (537), Expect = 1.200e-67
Identity = 102/134 (76.12%), Postives = 122/134 (91.04%), Query Frame = 0
Query:    1 NNKTLQKSVEEVRLITGQQPILTKAKKSIASFKVREEMILGITVTLRNKKMYAFLEKLIHIVLPRIRDFRGLSLKGFDRNGNYNFGLKEQLVFPEISYENVDQIKGFNISIVTTAKTKNEGIALLKEFGFPLTD 134
            NN  L+KS+EE R ITGQQPI+TKAKKSIA+FKVRE M LG+TVTLR  KMY+FLEKLIH+VLPRIRDFRGLS+KGFD+NGN+NFG++EQLVFPEI+Y+ ++Q +G NI+IV+TAKTK+EGIALLKEFGFPL D
Sbjct:   52 NNSLLKKSIEEFRTITGQQPIVTKAKKSIATFKVRETMNLGVTVTLRGNKMYSFLEKLIHLVLPRIRDFRGLSIKGFDKNGNFNFGIREQLVFPEINYDIINQTRGLNITIVSTAKTKDEGIALLKEFGFPLID 185          
BLAST of mRNA_H-paniculata_contig73631.15332.1 vs. uniprot
Match: A0A8E5BGR0_9PHAE (50S ribosomal protein L5, chloroplastic n=1 Tax=Phaeophyceae sp. TaxID=2249243 RepID=A0A8E5BGR0_9PHAE)

HSP 1 Score: 211 bits (536), Expect = 1.820e-67
Identity = 102/132 (77.27%), Postives = 121/132 (91.67%), Query Frame = 0
Query:    1 NNKTLQKSVEEVRLITGQQPILTKAKKSIASFKVREEMILGITVTLRNKKMYAFLEKLIHIVLPRIRDFRGLSLKGFDRNGNYNFGLKEQLVFPEISYENVDQIKGFNISIVTTAKTKNEGIALLKEFGFPL 132
            N K L++++EEVRLITGQQP+LTKAKKSIA FK+RE+MILG+TVTLRNKKMY FL KLIH+VLPRIRDFRGLS+KGFDR GNYNFGLKEQLVFPEI+YE+V +I GFNIS+VTTA+T+ EG  LL++FGFP+
Sbjct:   53 NKKILERAIEEVRLITGQQPVLTKAKKSIAGFKIREDMILGLTVTLRNKKMYEFLTKLIHLVLPRIRDFRGLSIKGFDRKGNYNFGLKEQLVFPEINYEDVKKINGFNISLVTTAQTEVEGKYLLEQFGFPI 184          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig73631.15332.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0R6LUT7_UNDPI1.530e-8294.0350S ribosomal protein L5, chloroplastic n=24 Tax=P... [more]
A0A1I9LVU6_9PHAE3.600e-8193.2350S ribosomal protein L5, chloroplastic n=14 Tax=P... [more]
A0A8F0F770_9PHAE5.960e-8089.5550S ribosomal protein L5, chloroplastic n=1 Tax=Pr... [more]
A0A2R4QQ29_9PHAE3.440e-7990.1550S ribosomal protein L5, chloroplastic n=3 Tax=Fu... [more]
A0A141BSM9_9PHAE1.400e-7886.5750S ribosomal protein L5, chloroplastic n=14 Tax=S... [more]
A0A8E6D6M4_9PHAE4.670e-7785.0750S ribosomal protein L5, chloroplastic n=1 Tax=Is... [more]
A0A2I4Q2J9_9PHAE6.020e-7384.3350S ribosomal protein L5, chloroplastic n=1 Tax=Di... [more]
A0A7S6ZPC4_9STRA2.990e-6977.6150S ribosomal protein L5, chloroplastic n=1 Tax=Sc... [more]
B7T1X2_VAULI1.200e-6776.1250S ribosomal protein L5, chloroplastic n=1 Tax=Va... [more]
A0A8E5BGR0_9PHAE1.820e-6777.2750S ribosomal protein L5, chloroplastic n=1 Tax=Ph... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031310Ribosomal protein L5, N-terminalPFAMPF00281Ribosomal_L5coord: 1..35
e-value: 1.9E-11
score: 44.1
IPR022803Ribosomal protein L5 domain superfamilyGENE3D3.30.1440.10coord: 1..134
e-value: 2.8E-57
score: 195.1
IPR022803Ribosomal protein L5 domain superfamilySUPERFAMILY55282RL5-likecoord: 1..132
IPR031309Ribosomal protein L5, C-terminalPFAMPF00673Ribosomal_L5_Ccoord: 40..131
e-value: 1.1E-36
score: 124.9
IPR002132Ribosomal protein L5PIRSFPIRSF002161RPL5p_RPL5a_RPL11e_RPL5ocoord: 1..134
e-value: 1.6E-46
score: 156.1
IPR002132Ribosomal protein L5PANTHERPTHR1199460S RIBOSOMAL PROTEIN L11-RELATEDcoord: 1..132
NoneNo IPR availablePANTHERPTHR11994:SF454S RIBOSOMAL PROTEIN L7, MITOCHONDRIALcoord: 1..132
IPR020929Ribosomal protein L5, conserved sitePROSITEPS00358RIBOSOMAL_L5coord: 12..28

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig73631contigH-paniculata_contig73631:230..634 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig73631.15332.1mRNA_H-paniculata_contig73631.15332.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig73631 230..634 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig73631.15332.1 ID=prot_H-paniculata_contig73631.15332.1|Name=mRNA_H-paniculata_contig73631.15332.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=135bp
NNKTLQKSVEEVRLITGQQPILTKAKKSIASFKVREEMILGITVTLRNKK
MYAFLEKLIHIVLPRIRDFRGLSLKGFDRNGNYNFGLKEQLVFPEISYEN
VDQIKGFNISIVTTAKTKNEGIALLKEFGFPLTD*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031310Ribosomal_L5_N
IPR022803Ribosomal_L5_dom_sf
IPR031309Ribosomal_L5_C
IPR002132Ribosomal_L5
IPR020929Ribosomal_L5_CS