prot_H-paniculata_contig7363.15331.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7363.15331.1
Unique Nameprot_H-paniculata_contig7363.15331.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length85
Homology
BLAST of mRNA_H-paniculata_contig7363.15331.1 vs. uniprot
Match: A0A1Y1IVX6_KLENI (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IVX6_KLENI)

HSP 1 Score: 62.0 bits (149), Expect = 2.710e-9
Identity = 32/80 (40.00%), Postives = 47/80 (58.75%), Query Frame = 0
Query:    4 LRFEQSRADPRMFRKVVDGEVETVVVVHADHILAHAKDRAMMWWFATHLEGRFKLKDLGDAEFYMGCHVTRNRKARELKL 83
            + F  S +D  +F  V+DGE    VVV  D IL  AK    +     HL  +F ++DLG AE+++G  +TR+R+AR +KL
Sbjct:  730 IEFRASESDAALFTGVIDGE-RVWVVVWVDDILIAAKGEQRLAKVKAHLSEKFDVRDLGPAEYFLGMELTRDRRARTIKL 808          
BLAST of mRNA_H-paniculata_contig7363.15331.1 vs. uniprot
Match: A0A1Y1IQX0_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IQX0_KLENI)

HSP 1 Score: 60.5 bits (145), Expect = 9.500e-9
Identity = 32/80 (40.00%), Postives = 47/80 (58.75%), Query Frame = 0
Query:    4 LRFEQSRADPRMFRKVVDGEVETVVVVHADHILAHAKDRAMMWWFATHLEGRFKLKDLGDAEFYMGCHVTRNRKARELKL 83
            + F+ S +D  +F  VVDGE    VVV  D IL  A     +     HL  +F ++DLG AE+++G  +TR+R+AR +KL
Sbjct: 1005 IEFQASESDAALFTGVVDGE-RVWVVVWVDDILIAAAGEKRLAKVKAHLSRKFDVRDLGPAEYFLGMELTRDRRARTVKL 1083          
BLAST of mRNA_H-paniculata_contig7363.15331.1 vs. uniprot
Match: A0A6H5JU20_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU20_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 1.720e-8
Identity = 30/78 (38.46%), Postives = 49/78 (62.82%), Query Frame = 0
Query:    6 FEQSRADPRMFRKVVDGEVETVVVVHADHILAHAKDRAMMWWFATHLEGRFKLKDLGDAEFYMGCHVTRNRKARELKL 83
            FEQ +ADP +FRK+VD  V  ++V++AD IL  A D       A+ L  +F  K+LG+ +++ GC + R+ +A  L++
Sbjct:  351 FEQCKADPCVFRKMVDEVVVMIIVIYADDILVAASDEDCKELLAS-LNKKFPTKNLGECQWFDGCAIERDVEAGTLRI 427          
BLAST of mRNA_H-paniculata_contig7363.15331.1 vs. uniprot
Match: A0A6H5K494_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K494_9PHAE)

HSP 1 Score: 59.3 bits (142), Expect = 2.320e-8
Identity = 31/63 (49.21%), Postives = 41/63 (65.08%), Query Frame = 0
Query:   11 ADPRMFRKVVDGEVETVVVVHADHILAHAKDRAMMWWFATHLEGRFKLKDLGDAEFYMGCHVT 73
            ADP +FRKVVDGEVE +VV+H D IL  A +      FA+ L  +F +KDLG+  +Y GC + 
Sbjct:  440 ADPCVFRKVVDGEVEGLVVIHVDDILVAADEGEREELFAS-LNKKFPVKDLGECIWYDGCAIA 501          
BLAST of mRNA_H-paniculata_contig7363.15331.1 vs. uniprot
Match: A0A6H5K1V1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1V1_9PHAE)

HSP 1 Score: 59.3 bits (142), Expect = 2.390e-8
Identity = 31/78 (39.74%), Postives = 45/78 (57.69%), Query Frame = 0
Query:    6 FEQSRADPRMFRKVVDGEVETVVVVHADHILAHAKDRAMMWWFATHLEGRFKLKDLGDAEFYMGCHVTRNRKARELKL 83
            FEQ +ADP +FRK+VD  V  ++V+H D IL    D       A+    RF  K+LG+ E++ GC + R+  A  LK+
Sbjct:  478 FEQCKADPCVFRKMVDEVVVMIIVIHVDDILVAGSDEDCEELLAS-FNKRFPSKNLGECEWFDGCAIERDVDAGALKI 554          
BLAST of mRNA_H-paniculata_contig7363.15331.1 vs. uniprot
Match: A0A6H5L663_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L663_9PHAE)

HSP 1 Score: 58.5 bits (140), Expect = 3.870e-8
Identity = 30/78 (38.46%), Postives = 47/78 (60.26%), Query Frame = 0
Query:    6 FEQSRADPRMFRKVVDGEVETVVVVHADHILAHAKDRAMMWWFATHLEGRFKLKDLGDAEFYMGCHVTRNRKARELKL 83
            FE  +ADP +FRK+VDG V  +VV++ D IL    D       A+ L  +F  K+LG+ E++ GC + R+ +A  L++
Sbjct:   44 FEPCKADPCVFRKMVDGVVVMIVVIYVDDILVAGSDEDCEELLAS-LNKKFPTKNLGECEWFDGCAIERDFEAGTLRI 120          
BLAST of mRNA_H-paniculata_contig7363.15331.1 vs. uniprot
Match: A0A6H5K729_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K729_9PHAE)

HSP 1 Score: 57.8 bits (138), Expect = 8.090e-8
Identity = 29/78 (37.18%), Postives = 48/78 (61.54%), Query Frame = 0
Query:    6 FEQSRADPRMFRKVVDGEVETVVVVHADHILAHAKDRAMMWWFATHLEGRFKLKDLGDAEFYMGCHVTRNRKARELKL 83
            FEQ +ADP +FRK+VD  V  ++V++AD IL    D       A+ L  +F  K+LG+ +++ GC + R+ +A  L++
Sbjct:  367 FEQCKADPCVFRKMVDEVVVMIIVIYADDILVAGSDEDCEELLAS-LNKKFPTKNLGECQWFDGCAIERDVEAGTLRI 443          
BLAST of mRNA_H-paniculata_contig7363.15331.1 vs. uniprot
Match: A0A6H5JTV6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTV6_9PHAE)

HSP 1 Score: 57.4 bits (137), Expect = 1.150e-7
Identity = 29/78 (37.18%), Postives = 47/78 (60.26%), Query Frame = 0
Query:    6 FEQSRADPRMFRKVVDGEVETVVVVHADHILAHAKDRAMMWWFATHLEGRFKLKDLGDAEFYMGCHVTRNRKARELKL 83
            FEQ +ADP +FRK+VD  V  ++V++ D IL    D       A+ L  +F  K+LG+ E++ GC + R+ +A  L++
Sbjct:  708 FEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLAS-LNKKFPTKNLGECEWFDGCAIERDVEAGTLRI 784          
BLAST of mRNA_H-paniculata_contig7363.15331.1 vs. uniprot
Match: A0A6H5JEW4_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEW4_9PHAE)

HSP 1 Score: 57.4 bits (137), Expect = 1.160e-7
Identity = 29/78 (37.18%), Postives = 46/78 (58.97%), Query Frame = 0
Query:    6 FEQSRADPRMFRKVVDGEVETVVVVHADHILAHAKDRAMMWWFATHLEGRFKLKDLGDAEFYMGCHVTRNRKARELKL 83
            FEQ +ADP +FRK+VD  V  ++V++ D IL    D       A+ L  +   K+LG+ E++ GC + R+ +A  LK+
Sbjct: 1012 FEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDEDCEELLAS-LNKKIPTKNLGECEWFDGCAIERDEEAGTLKI 1088          
BLAST of mRNA_H-paniculata_contig7363.15331.1 vs. uniprot
Match: A0A6H5JRS6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRS6_9PHAE)

HSP 1 Score: 56.2 bits (134), Expect = 1.450e-7
Identity = 28/78 (35.90%), Postives = 47/78 (60.26%), Query Frame = 0
Query:    6 FEQSRADPRMFRKVVDGEVETVVVVHADHILAHAKDRAMMWWFATHLEGRFKLKDLGDAEFYMGCHVTRNRKARELKL 83
            FEQ +ADP +FRK+VD  V  ++V++ D IL    D       A+ L  +F  K+LG+ +++ GC + R+ +A  L++
Sbjct:   52 FEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLAS-LNKKFPTKNLGECQWFDGCAIERDVEAGTLRI 128          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7363.15331.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1Y1IVX6_KLENI2.710e-940.00Integrase catalytic domain-containing protein (Fra... [more]
A0A1Y1IQX0_KLENI9.500e-940.00Uncharacterized protein n=1 Tax=Klebsormidium nite... [more]
A0A6H5JU20_9PHAE1.720e-838.46Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K494_9PHAE2.320e-849.21Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K1V1_9PHAE2.390e-839.74Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L663_9PHAE3.870e-838.46Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K729_9PHAE8.090e-837.18Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JTV6_9PHAE1.150e-737.18Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JEW4_9PHAE1.160e-737.18CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JRS6_9PHAE1.450e-735.90Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 3..81
e-value: 5.0E-8
score: 32.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7363contigH-paniculata_contig7363:9616..9870 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7363.15331.1mRNA_H-paniculata_contig7363.15331.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7363 9268..9870 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7363.15331.1 ID=prot_H-paniculata_contig7363.15331.1|Name=mRNA_H-paniculata_contig7363.15331.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=85bp
MTALRFEQSRADPRMFRKVVDGEVETVVVVHADHILAHAKDRAMMWWFAT
HLEGRFKLKDLGDAEFYMGCHVTRNRKARELKLD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2