prot_H-paniculata_contig73474.15317.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig73474.15317.1
Unique Name	prot_H-paniculata_contig73474.15317.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	64

Homology

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BLAST of mRNA_H-paniculata_contig73474.15317.1 vs. uniprot
Match: A0A7G1K7S9_9PHAE (Cytochrome c oxidase subunit 1 (Fragment) n=2 Tax=Mutimo cylindricus TaxID=1948892 RepID=A0A7G1K7S9_9PHAE)

HSP 1 Score: 133 bits (334), Expect = 2.650e-38
Identity = 62/64 (96.88%), Postives = 64/64 (100.00%), Query Frame = 0

Query:    1 LYQHLFWFFGHPEVYILILPGFGIVSHILSTFARKPVFGYLGMVYAMLSIGILGFIVWAHHMFT 64
            LYQHLFWFFGHPEVYI+ILPGFGIVSHILSTF+RKPVFGYLGMVYAMLSIGILGFIVWAHHMFT
Sbjct:   80 LYQHLFWFFGHPEVYIIILPGFGIVSHILSTFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFT 143

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BLAST of mRNA_H-paniculata_contig73474.15317.1 vs. uniprot
Match: Q2TQY8_SIPDE (Cytochrome c oxidase subunit 1 (Fragment) n=1 Tax=Siphonochilus decorus TaxID=97764 RepID=Q2TQY8_SIPDE)

HSP 1 Score: 130 bits (327), Expect = 2.160e-37
Identity = 58/64 (90.62%), Postives = 64/64 (100.00%), Query Frame = 0

Query:    1 LYQHLFWFFGHPEVYILILPGFGIVSHILSTFARKPVFGYLGMVYAMLSIGILGFIVWAHHMFT 64
            LYQHLFWFFGHPEVYILILPGFGI+SHI+STF+RKPVFGYLGMVYAM+SIG+LGF+VWAHHMFT
Sbjct:   86 LYQHLFWFFGHPEVYILILPGFGIISHIVSTFSRKPVFGYLGMVYAMISIGVLGFLVWAHHMFT 149

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BLAST of mRNA_H-paniculata_contig73474.15317.1 vs. uniprot
Match: O99385_9STRA (Cytochrome c oxidase subunit 1 (Fragment) n=3 Tax=PX clade TaxID=569578 RepID=O99385_9STRA)

HSP 1 Score: 135 bits (339), Expect = 4.890e-37
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0

Query:    1 LYQHLFWFFGHPEVYILILPGFGIVSHILSTFARKPVFGYLGMVYAMLSIGILGFIVWAHHMFT 64
            LYQHLFWFFGHPEVYILILPGFGIVSHILSTFARKPVFGYLGMVYAMLSIGILGFIVWAHHMFT
Sbjct:  217 LYQHLFWFFGHPEVYILILPGFGIVSHILSTFARKPVFGYLGMVYAMLSIGILGFIVWAHHMFT 280

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BLAST of mRNA_H-paniculata_contig73474.15317.1 vs. uniprot
Match: A0A8J5WG91_ZIZPA (Uncharacterized protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5WG91_ZIZPA)

HSP 1 Score: 130 bits (327), Expect = 1.310e-36
Identity = 58/64 (90.62%), Postives = 64/64 (100.00%), Query Frame = 0

Query:    1 LYQHLFWFFGHPEVYILILPGFGIVSHILSTFARKPVFGYLGMVYAMLSIGILGFIVWAHHMFT 64
            LYQHLFWFFGHPEVYILILPGFGI+SHI+STF+RKPVFGYLGMVYAM+SIG+LGF+VWAHHMFT
Sbjct:   26 LYQHLFWFFGHPEVYILILPGFGIISHIVSTFSRKPVFGYLGMVYAMISIGVLGFLVWAHHMFT 89

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BLAST of mRNA_H-paniculata_contig73474.15317.1 vs. uniprot
Match: A0A0U4ZTN0_9PHAE (Cytochrome c oxidase subunit 1 (Fragment) n=8 Tax=Phaeophyceae TaxID=2870 RepID=A0A0U4ZTN0_9PHAE)

HSP 1 Score: 135 bits (339), Expect = 1.840e-36
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0

Query:    1 LYQHLFWFFGHPEVYILILPGFGIVSHILSTFARKPVFGYLGMVYAMLSIGILGFIVWAHHMFT 64
            LYQHLFWFFGHPEVYILILPGFGIVSHILSTFARKPVFGYLGMVYAMLSIGILGFIVWAHHMFT
Sbjct:  153 LYQHLFWFFGHPEVYILILPGFGIVSHILSTFARKPVFGYLGMVYAMLSIGILGFIVWAHHMFT 216

[Close]

BLAST of mRNA_H-paniculata_contig73474.15317.1 vs. uniprot
Match: M1EYI5_9PHAE (Cytochrome c oxidase subunit 1 (Fragment) n=7 Tax=Fucales TaxID=3009 RepID=M1EYI5_9PHAE)

HSP 1 Score: 132 bits (333), Expect = 2.980e-36
Identity = 62/64 (96.88%), Postives = 64/64 (100.00%), Query Frame = 0

Query:    1 LYQHLFWFFGHPEVYILILPGFGIVSHILSTFARKPVFGYLGMVYAMLSIGILGFIVWAHHMFT 64
            LYQHLFWFFGHPEVYILILPGFGIVSHIL+TF+RKPVFGYLGMVYAMLSIGILGFIVWAHHMFT
Sbjct:  201 LYQHLFWFFGHPEVYILILPGFGIVSHILATFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFT 264

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BLAST of mRNA_H-paniculata_contig73474.15317.1 vs. uniprot
Match: A0A452XDY6_AEGTS (Cytochrome c oxidase subunit 1 n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A452XDY6_AEGTS)

HSP 1 Score: 130 bits (327), Expect = 3.410e-36
Identity = 58/64 (90.62%), Postives = 64/64 (100.00%), Query Frame = 0

Query:    1 LYQHLFWFFGHPEVYILILPGFGIVSHILSTFARKPVFGYLGMVYAMLSIGILGFIVWAHHMFT 64
            LYQHLFWFFGHPEVYILILPGFGI+SHI+STF+RKPVFGYLGMVYAM+SIG+LGF+VWAHHMFT
Sbjct:  149 LYQHLFWFFGHPEVYILILPGFGIISHIVSTFSRKPVFGYLGMVYAMISIGVLGFLVWAHHMFT 212

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BLAST of mRNA_H-paniculata_contig73474.15317.1 vs. uniprot
Match: A0A4P8PC88_9POAL (Cytochrome c oxidase subunit 1 (Fragment) n=2 Tax=Mesangiospermae TaxID=1437183 RepID=A0A4P8PC88_9POAL)

HSP 1 Score: 130 bits (327), Expect = 3.950e-36
Identity = 58/64 (90.62%), Postives = 64/64 (100.00%), Query Frame = 0

Query:    1 LYQHLFWFFGHPEVYILILPGFGIVSHILSTFARKPVFGYLGMVYAMLSIGILGFIVWAHHMFT 64
            LYQHLFWFFGHPEVYILILPGFGI+SHI+STF+RKPVFGYLGMVYAM+SIG+LGF+VWAHHMFT
Sbjct:  175 LYQHLFWFFGHPEVYILILPGFGIISHIVSTFSRKPVFGYLGMVYAMISIGVLGFLVWAHHMFT 238

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BLAST of mRNA_H-paniculata_contig73474.15317.1 vs. uniprot
Match: M1F017_SARFS (Cytochrome c oxidase subunit 1 (Fragment) n=4 Tax=Fucales TaxID=3009 RepID=M1F017_SARFS)

HSP 1 Score: 132 bits (333), Expect = 6.720e-36
Identity = 62/64 (96.88%), Postives = 64/64 (100.00%), Query Frame = 0

Query:    1 LYQHLFWFFGHPEVYILILPGFGIVSHILSTFARKPVFGYLGMVYAMLSIGILGFIVWAHHMFT 64
            LYQHLFWFFGHPEVYILILPGFGIVSHIL+TF+RKPVFGYLGMVYAMLSIGILGFIVWAHHMFT
Sbjct:  201 LYQHLFWFFGHPEVYILILPGFGIVSHILATFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFT 264

[Close]

BLAST of mRNA_H-paniculata_contig73474.15317.1 vs. uniprot
Match: E6ZES6_ECTSI (Cytochrome c oxidase subunit 1 n=691 Tax=Phaeophyceae TaxID=2870 RepID=E6ZES6_ECTSI)

HSP 1 Score: 134 bits (338), Expect = 9.250e-36
Identity = 63/64 (98.44%), Postives = 64/64 (100.00%), Query Frame = 0

Query:    1 LYQHLFWFFGHPEVYILILPGFGIVSHILSTFARKPVFGYLGMVYAMLSIGILGFIVWAHHMFT 64
            LYQHLFWFFGHPEVYILILPGFGI+SHILSTFARKPVFGYLGMVYAMLSIGILGFIVWAHHMFT
Sbjct:  257 LYQHLFWFFGHPEVYILILPGFGIISHILSTFARKPVFGYLGMVYAMLSIGILGFIVWAHHMFT 320

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig73474.15317.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig73474.15317.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A7G1K7S9_9PHAE	2.650e-38	96.88	Cytochrome c oxidase subunit 1 (Fragment) n=2 Tax=...	[more]
Q2TQY8_SIPDE	2.160e-37	90.63	Cytochrome c oxidase subunit 1 (Fragment) n=1 Tax=...	[more]
O99385_9STRA	4.890e-37	100.00	Cytochrome c oxidase subunit 1 (Fragment) n=3 Tax=...	[more]
A0A8J5WG91_ZIZPA	1.310e-36	90.63	Uncharacterized protein n=1 Tax=Zizania palustris ...	[more]
A0A0U4ZTN0_9PHAE	1.840e-36	100.00	Cytochrome c oxidase subunit 1 (Fragment) n=8 Tax=...	[more]
M1EYI5_9PHAE	2.980e-36	96.88	Cytochrome c oxidase subunit 1 (Fragment) n=7 Tax=...	[more]
A0A452XDY6_AEGTS	3.410e-36	90.63	Cytochrome c oxidase subunit 1 n=1 Tax=Aegilops ta...	[more]
A0A4P8PC88_9POAL	3.950e-36	90.63	Cytochrome c oxidase subunit 1 (Fragment) n=2 Tax=...	[more]
M1F017_SARFS	6.720e-36	96.88	Cytochrome c oxidase subunit 1 (Fragment) n=4 Tax=...	[more]
E6ZES6_ECTSI	9.250e-36	98.44	Cytochrome c oxidase subunit 1 n=691 Tax=Phaeophyc...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000883	Cytochrome c oxidase subunit I	PRINTS	PR01165	CYCOXIDASEI	coord: 5..26 score: 88.88 coord: 51..64 score: 73.29
IPR000883	Cytochrome c oxidase subunit I	PFAM	PF00115	COX1	coord: 1..64 e-value: 8.5E-25 score: 87.5
IPR000883	Cytochrome c oxidase subunit I	PANTHER	PTHR10422	CYTOCHROME C OXIDASE SUBUNIT 1	coord: 1..64
IPR036927	Cytochrome c oxidase-like, subunit I superfamily	GENE3D	1.20.210.10		coord: 1..64 e-value: 4.4E-32 score: 113.0
IPR036927	Cytochrome c oxidase-like, subunit I superfamily	SUPERFAMILY	81442	Cytochrome c oxidase subunit I-like	coord: 1..64
IPR023615	Cytochrome c oxidase, subunit I, copper-binding site	PROSITE	PS00077	COX1_CUB	coord: 7..61
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 26..36
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..5
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 37..59
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 6..25
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 60..64
None	No IPR available	TMHMM	TMhelix		coord: 15..32
None	No IPR available	TMHMM	TMhelix		coord: 37..59
IPR023616	Cytochrome c oxidase-like, subunit I domain	PROSITE	PS50855	COX1	coord: 1..64 score: 23.631

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig73474	contig	H-paniculata_contig73474:188..379 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig73474.15317.1	mRNA_H-paniculata_contig73474.15317.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig73474 188..379 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig73474.15317.1 ID=prot_H-paniculata_contig73474.15317.1|Name=mRNA_H-paniculata_contig73474.15317.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=64bp
LYQHLFWFFGHPEVYILILPGFGIVSHILSTFARKPVFGYLGMVYAMLSI
GILGFIVWAHHMFT

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000883	Cyt_C_Oxase_1
IPR036927	Cyt_c_oxase-like_su1_sf
IPR023615	Cyt_c_Oxase_su1_BS
IPR023616	Cyt_c_oxase-like_su1_dom