prot_H-paniculata_contig73385.15307.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig73385.15307.1
Unique Nameprot_H-paniculata_contig73385.15307.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length70
Homology
BLAST of mRNA_H-paniculata_contig73385.15307.1 vs. uniprot
Match: UPI0006AA84E5 (uncharacterized protein LOC106350832 n=1 Tax=Brassica napus TaxID=3708 RepID=UPI0006AA84E5)

HSP 1 Score: 66.6 bits (161), Expect = 2.970e-11
Identity = 38/69 (55.07%), Postives = 49/69 (71.01%), Query Frame = 0
Query:    1 LLVAVYVDDLVITGRR-EKVDEFKHNISQRFRMEDLGSLSRVLGIEARRDRPNGTITISQGSYIREVLK 68
            LLVAVYVDDL+ITG + E +D FK N+S +F M DLG L+  LGIE    + NG I+I Q SY ++VL+
Sbjct:    7 LLVAVYVDDLLITGSKTEMIDGFKGNMSNKFEMSDLGLLTYYLGIEV--VQHNGGISIKQASYAKKVLE 73          
BLAST of mRNA_H-paniculata_contig73385.15307.1 vs. uniprot
Match: A0A0A9XEM5_LYGHE (Copia protein (Fragment) n=2 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9XEM5_LYGHE)

HSP 1 Score: 65.5 bits (158), Expect = 8.710e-11
Identity = 34/69 (49.28%), Postives = 49/69 (71.01%), Query Frame = 0
Query:    1 LLVAVYVDDLVI-TGRREKVDEFKHNISQRFRMEDLGSLSRVLGIEARRDRPNGTITISQGSYIREVLK 68
            +L+AVYVDDLVI +  REK+DE K ++S+ F M D+G ++  LGIE  RD+  G + +SQ  YI ++LK
Sbjct:  214 ILIAVYVDDLVILSANREKLDELKEDLSRTFEMRDIGKINYCLGIEFSRDKDGGVL-MSQEKYINKLLK 281          
BLAST of mRNA_H-paniculata_contig73385.15307.1 vs. uniprot
Match: A0A2J7RGU0_9NEOP (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7RGU0_9NEOP)

HSP 1 Score: 65.1 bits (157), Expect = 1.140e-10
Identity = 33/69 (47.83%), Postives = 47/69 (68.12%), Query Frame = 0
Query:    1 LLVAVYVDDLVITGRREKVDEFKHNISQRFRMEDLGSLSRVLGIEARRDRPNG-TITISQGSYIREVLK 68
            ++VA+YVDD++I G R+ V++ K  +SQR  ++DLG +S  LGI    DRPNG  I I Q +Y+ E LK
Sbjct:  167 IIVAIYVDDMIICGTRKDVNDCKRQLSQRLNVKDLGPVSNFLGINV--DRPNGYVIKIHQENYVNETLK 233          
BLAST of mRNA_H-paniculata_contig73385.15307.1 vs. uniprot
Match: A0A2J7PFT8_9NEOP (Uncharacterized protein n=1 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7PFT8_9NEOP)

HSP 1 Score: 65.1 bits (157), Expect = 1.210e-10
Identity = 33/69 (47.83%), Postives = 47/69 (68.12%), Query Frame = 0
Query:    1 LLVAVYVDDLVITGRREKVDEFKHNISQRFRMEDLGSLSRVLGIEARRDRPNG-TITISQGSYIREVLK 68
            ++VA+YVDD++I G R+ V++ K  +SQR  ++DLG +S  LGI    DRPNG  I I Q +Y+ E LK
Sbjct:  927 IIVAIYVDDMIICGTRKDVNDCKRQLSQRLNVKDLGPVSNFLGINV--DRPNGYVIKIHQENYVNETLK 993          
BLAST of mRNA_H-paniculata_contig73385.15307.1 vs. uniprot
Match: A0A2J7Q727_9NEOP (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=4 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7Q727_9NEOP)

HSP 1 Score: 65.1 bits (157), Expect = 1.220e-10
Identity = 33/69 (47.83%), Postives = 47/69 (68.12%), Query Frame = 0
Query:    1 LLVAVYVDDLVITGRREKVDEFKHNISQRFRMEDLGSLSRVLGIEARRDRPNG-TITISQGSYIREVLK 68
            ++VA+YVDD++I G R+ V++ K  +SQR  ++DLG +S  LGI    DRPNG  I I Q +Y+ E LK
Sbjct: 1030 IIVAIYVDDMIICGTRKDVNDCKRQLSQRLNVKDLGPVSNFLGINV--DRPNGYVIKIHQENYVNETLK 1096          
BLAST of mRNA_H-paniculata_contig73385.15307.1 vs. uniprot
Match: A0A2U1MFK9_ARTAN (Zinc finger, CCHC-type n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1MFK9_ARTAN)

HSP 1 Score: 64.7 bits (156), Expect = 1.680e-10
Identity = 33/69 (47.83%), Postives = 51/69 (73.91%), Query Frame = 0
Query:    1 LLVAVYVDDLVITGRR-EKVDEFKHNISQRFRMEDLGSLSRVLGIEARRDRPNGTITISQGSYIREVLK 68
            L++AVYVDDL++TG +  ++ EFK  + +RF M DLG LS  LGIE +++  + +I+ISQ SY +++LK
Sbjct: 1077 LIIAVYVDDLLVTGSKLGEIGEFKRQMQERFDMSDLGKLSYYLGIEVKQE--DSSISISQESYAKKILK 1143          
BLAST of mRNA_H-paniculata_contig73385.15307.1 vs. uniprot
Match: A0A2U1MW82_ARTAN (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1MW82_ARTAN)

HSP 1 Score: 63.9 bits (154), Expect = 3.110e-10
Identity = 30/69 (43.48%), Postives = 47/69 (68.12%), Query Frame = 0
Query:    1 LLVAVYVDDLVITG-RREKVDEFKHNISQRFRMEDLGSLSRVLGIEARRDRPNGTITISQGSYIREVLK 68
            L + +YVDD++I    ++++ E K  +S  F M+DLG+  ++LG+E RRDR  G +T+SQ  YI +VLK
Sbjct:  958 LYLVLYVDDMLIAAPNKDQIRELKDQLSNEFDMKDLGAAKKILGMEIRRDRKMGKLTLSQSDYISKVLK 1026          
BLAST of mRNA_H-paniculata_contig73385.15307.1 vs. uniprot
Match: A0A699I3C7_TANCI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A699I3C7_TANCI)

HSP 1 Score: 63.2 bits (152), Expect = 5.730e-10
Identity = 31/69 (44.93%), Postives = 47/69 (68.12%), Query Frame = 0
Query:    1 LLVAVYVDDLVITG-RREKVDEFKHNISQRFRMEDLGSLSRVLGIEARRDRPNGTITISQGSYIREVLK 68
            L + +YVDD++I    ++++ E K  +S  F M+DLG+  R+LG+E RRDR  G +T+SQ  YI +VLK
Sbjct:  488 LYLVLYVDDMLIAAPNKDQIRELKDQLSNEFDMKDLGAAKRILGMEIRRDRKMGKLTLSQIDYILKVLK 556          
BLAST of mRNA_H-paniculata_contig73385.15307.1 vs. uniprot
Match: A0A6H5KL37_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL37_9PHAE)

HSP 1 Score: 62.4 bits (150), Expect = 1.080e-9
Identity = 28/67 (41.79%), Postives = 46/67 (68.66%), Query Frame = 0
Query:    3 VAVYVDDLVITGRREK-VDEFKHNISQRFRMEDLGSLSRVLGIEARRDRPNGTITISQGSYIREVLK 68
            + +YVDDL++ G   + +   K  ++QRF+M D+G +  VLG+E +RDR  GT+TISQ +Y + +L+
Sbjct:  652 LTLYVDDLLLAGNNSRAISMIKKKLTQRFKMTDMGEVKLVLGMEIKRDRNQGTLTISQEAYSKSILE 718          
BLAST of mRNA_H-paniculata_contig73385.15307.1 vs. uniprot
Match: A0A7S3Y6S2_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6S2_HETAK)

HSP 1 Score: 61.2 bits (147), Expect = 1.810e-9
Identity = 30/68 (44.12%), Postives = 48/68 (70.59%), Query Frame = 0
Query:    1 LLVAVYVDDLVITGRREK-VDEFKHNISQRFRMEDLGSLSRVLGIEARRDRPNGTITISQGSYIREVL 67
            L+VAVYVDDLVI+G  +  V EFK +++ ++ + D G L+++LGI+  RD+ N    +SQ S+I++ L
Sbjct:  117 LMVAVYVDDLVISGSSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDAL 184          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig73385.15307.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0006AA84E52.970e-1155.07uncharacterized protein LOC106350832 n=1 Tax=Brass... [more]
A0A0A9XEM5_LYGHE8.710e-1149.28Copia protein (Fragment) n=2 Tax=Lygus hesperus Ta... [more]
A0A2J7RGU0_9NEOP1.140e-1047.83Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2J7PFT8_9NEOP1.210e-1047.83Uncharacterized protein n=1 Tax=Cryptotermes secun... [more]
A0A2J7Q727_9NEOP1.220e-1047.83Retrovirus-related Pol polyprotein from transposon... [more]
A0A2U1MFK9_ARTAN1.680e-1047.83Zinc finger, CCHC-type n=1 Tax=Artemisia annua Tax... [more]
A0A2U1MW82_ARTAN3.110e-1043.48Retrovirus-related Pol polyprotein from transposon... [more]
A0A699I3C7_TANCI5.730e-1044.93Retrovirus-related Pol polyprotein from transposon... [more]
A0A6H5KL37_9PHAE1.080e-941.79Integrase catalytic domain-containing protein n=1 ... [more]
A0A7S3Y6S2_HETAK1.810e-944.12Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 1..68
e-value: 3.9E-14
score: 52.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig73385contigH-paniculata_contig73385:14..223 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig73385.15307.1mRNA_H-paniculata_contig73385.15307.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig73385 14..223 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig73385.15307.1 ID=prot_H-paniculata_contig73385.15307.1|Name=mRNA_H-paniculata_contig73385.15307.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=70bp
LLVAVYVDDLVITGRREKVDEFKHNISQRFRMEDLGSLSRVLGIEARRDR
PNGTITISQGSYIREVLKI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2