prot_H-paniculata_contig7316.15287.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7316.15287.1
Unique Nameprot_H-paniculata_contig7316.15287.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length210
Homology
BLAST of mRNA_H-paniculata_contig7316.15287.1 vs. uniprot
Match: A0A6H5LFZ8_9PHAE (Diaminopimelate epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LFZ8_9PHAE)

HSP 1 Score: 368 bits (944), Expect = 4.300e-126
Identity = 174/210 (82.86%), Postives = 191/210 (90.95%), Query Frame = 0
Query:    1 VPFRKYQGLGNDFILVDNRDREEPLLTAGESAHLCDRRYGIGGDGVIFALPGKEGLDYTMRIINSDGTEPEMCGNGIRCMARFLADLEGKTAAEYKIHTLAGTIIPVAREDGLVTVDMGPPELNGPKVPTTLPPNADGVVLRSPMKIDDKDWEVTCVSMGNPHAVVFVPDLDKLDLPAVGPQFETHPSFPAKINTEFVQVIDE-HTKVGI 209
            VPF KYQGLGNDFILVDNR+  EP+LTA ESA LCDRRYGIGGDGVIFALPG + +DY+MRIINSDG+EPEMCGNGIRCMARFLADLEGK  AEYKIHTLAGTIIP+AREDGLVTVDMGPPELNGPKVP+TLP N DGVVL+ P+K+D KDWEVTCVSMGNPHAVVFVPD+D LDLP +GPQFETHPSFPAKINTEFVQV++  H K+ +
Sbjct:   55 VPFSKYQGLGNDFILVDNREEAEPMLTAEESASLCDRRYGIGGDGVIFALPGSDDMDYSMRIINSDGSEPEMCGNGIRCMARFLADLEGKKKAEYKIHTLAGTIIPLAREDGLVTVDMGPPELNGPKVPSTLPTNDDGVVLKEPIKVDGKDWEVTCVSMGNPHAVVFVPDVDALDLPTIGPQFETHPSFPAKINTEFVQVLNRGHVKMVV 264          
BLAST of mRNA_H-paniculata_contig7316.15287.1 vs. uniprot
Match: A0A7R9YC33_9STRA (Diaminopimelate epimerase n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YC33_9STRA)

HSP 1 Score: 288 bits (736), Expect = 9.360e-95
Identity = 139/216 (64.35%), Postives = 167/216 (77.31%), Query Frame = 0
Query:    1 VPFRKYQGLGNDFILVDNRDREEPLLTAGESAHLCDRRYGIGGDGVIFALPGKEGLDYTMRIINSDGTEPEMCGNGIRCMARFLADLEGKTAAE--YKIHTLAGTIIPVAREDGLVTVDMGPPELNGPKVPTTLPPNAD-GVVLRSPMKID---DKDWEVTCVSMGNPHAVVFVPDLDKLDLPAVGPQFETHPSFPAKINTEFVQVIDE-HTKVGI 209
            V F KYQGLGNDF+LVDNRD EEP+LT  ES  LCDR +G+G DGVIFA+PG++G DY+MRI NSDG+EPEMCGNGIRCMA+FL DL+G + AE  YKI TLAGT++P     G++TVDMG PEL GP+VPTTL P  D   V+ +PM       KDW+VTCVSMGNPH + FV DLD +DL AVGPQFE HP FPA++NTEFVQV+ + H K+ +
Sbjct:   33 VAFSKYQGLGNDFLLVDNRDAEEPILTPDESEALCDRHFGVGADGVIFAMPGRDGCDYSMRIYNSDGSEPEMCGNGIRCMAKFLQDLDGSSGAEKQYKIWTLAGTMVPTVVASGMITVDMGEPELRGPEVPTTLKPTRDDSAVIDAPMAAPLPGGKDWKVTCVSMGNPHCITFVDDLDAVDLAAVGPQFENHPVFPARVNTEFVQVLSKSHLKMKV 248          
BLAST of mRNA_H-paniculata_contig7316.15287.1 vs. uniprot
Match: A0A835YU85_9STRA (Diaminopimelate epimerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU85_9STRA)

HSP 1 Score: 284 bits (727), Expect = 1.520e-93
Identity = 136/208 (65.38%), Postives = 164/208 (78.85%), Query Frame = 0
Query:    3 FRKYQGLGNDFILVDNRDREEPLLTAGESAHLCDRRYGIGGDGVIFALPGKEGLDYTMRIINSDGTEPEMCGNGIRCMARFLADLEGKTAAEYKIHTLAGTIIPVAREDGLVTVDMGPPELNGPKVPTTLPPNADGVVLRSPMKIDDKDWEVTCVSMGNPHAVVFVPDLDKLDLPAVGPQFETHPSFPAKINTEFVQVIDE-HTKVGI 209
            F KY+GLGNDFILVDNR+  +P+L+  +SA LCDR +GIGGDGVIFALPG+  LDY MRI NSDG+EPEMCGNGIRCMARFLADL+G+  A Y+I T AG I+PV    GLVTVDMGPPELNGPKVPTTLP  ADG V+ +P+++  + W VTCVSMGNPHA+VFV DL+ + L  +GP FE +  FPA+ NTEFVQV+   H K+ +
Sbjct:   28 FHKYEGLGNDFILVDNRETADPVLSPEQSAKLCDRNFGIGGDGVIFALPGEGDLDYKMRIYNSDGSEPEMCGNGIRCMARFLADLDGEKEATYRIGTGAGLIVPVVGGGGLVTVDMGPPELNGPKVPTTLPTGADGAVVAAPLEVAGQQWSVTCVSMGNPHAIVFVNDLNTIKLADIGPLFEHNAVFPARTNTEFVQVLSRSHLKMKV 235          
BLAST of mRNA_H-paniculata_contig7316.15287.1 vs. uniprot
Match: A0A7S2S1Q0_9STRA (Diaminopimelate epimerase n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S1Q0_9STRA)

HSP 1 Score: 282 bits (721), Expect = 2.770e-92
Identity = 135/202 (66.83%), Postives = 160/202 (79.21%), Query Frame = 0
Query:    1 VPFRKYQGLGNDFILVDNRDREEPLLTAGESAHLCDRRYGIGGDGVIFALPGKEGLDYTMRIINSDGTEPEMCGNGIRCMARFLADLEGKTAAE--YKIHTLAGTIIPVAREDGLVTVDMGPPELNGPKVPTTLPPNADGVVLRSPMKIDDKDWEVTCVSMGNPHAVVFVPDLDKLDLPAVGPQFETHPSFPAKINTEFVQV 200
            V F+KY GLGNDFILVDNR   +P+++  ++A +CDR +G+GGDGVIFALP  E  DY MRI NSDG+EPEMCGNGIRCMARFL  L+G    E  Y I+T AG IIPV R DGLVTVDMGPP L GPKVPTTL P    VV+ +P+++ D+DWEVTCVSMGNPHAVVF+ ++D LDL  VGPQFE+HP FPA+INTEFV+V
Sbjct:   50 VAFQKYHGLGNDFILVDNRHSTDPVMSPEQAARMCDRNFGVGGDGVIFALP-SESADYAMRIYNSDGSEPEMCGNGIRCMARFLQKLDGSEGTETTYTINTGAGPIIPVIRGDGLVTVDMGPPILEGPKVPTTLAPTQGDVVINAPLRVADQDWEVTCVSMGNPHAVVFIDNVDSLDLHHVGPQFESHPEFPARINTEFVEV 250          
BLAST of mRNA_H-paniculata_contig7316.15287.1 vs. uniprot
Match: A0A7S2HNF9_9STRA (Diaminopimelate epimerase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HNF9_9STRA)

HSP 1 Score: 271 bits (693), Expect = 4.550e-88
Identity = 139/215 (64.65%), Postives = 166/215 (77.21%), Query Frame = 0
Query:    1 VPFRKYQGLGNDFILVDNRDREEPLLTAGESAHLCDRRYGIGGDGVIFALPGKEG-LDYTMRIINSDGTEPEMCGNGIRCMARFLADLEG--KTAAE-YKIHTLAGTIIPVAREDGLVTVDMGPPELNGPKVPTTLPPN-ADGVVLRSPMKIDDKDWEVTCVSMGNPHAVVFVPDLDKLDLPAVGPQFETHPSFPAKINTEFVQVIDE-HTKVGI 209
            V F KYQGLGNDFIL+DNRD  EPLLT  ++  +CDR +G+GGDGVIFALP  E   DY MRI NSDG+EPEMCGNGIRCM +F+  +EG  +TA E Y I T AG IIP  REDGLVTVDMG P L G KVPTTL P  +DG+VL +P+++  ++W VTCVSMGNPHA+VFV DL+ +DL +VGP FET+P FPAKINTEFVQV+D  H K+ +
Sbjct:   43 VEFEKYQGLGNDFILIDNRDDPEPLLTPAQAERMCDRNFGVGGDGVIFALPASEAESDYRMRIYNSDGSEPEMCGNGIRCMTKFIQKIEGGAETAKESYHISTGAGPIIPKIREDGLVTVDMGFPILEGSKVPTTLQPTKSDGMVLDAPLEVMGQEWLVTCVSMGNPHAIVFVDDLEAVDLNSVGPVFETNPVFPAKINTEFVQVLDPTHLKMKV 257          
BLAST of mRNA_H-paniculata_contig7316.15287.1 vs. uniprot
Match: UPI001F445AEF (diaminopimelate epimerase n=1 Tax=Leptodesmis sichuanensis TaxID=2906798 RepID=UPI001F445AEF)

HSP 1 Score: 262 bits (669), Expect = 4.400e-85
Identity = 123/204 (60.29%), Postives = 150/204 (73.53%), Query Frame = 0
Query:    1 VPFRKYQGLGNDFILVDNRDREEPLLTAGESAHLCDRRYGIGGDGVIFALPGKEGLDYTMRIINSDGTEPEMCGNGIRCMARFLADLEGK---TAAEYKIHTLAGTIIPVAREDGLVTVDMGPPELNGPKVPTTLPPNADGVVLRSPMKIDDKDWEVTCVSMGNPHAVVFVPDLDKLDLPAVGPQFETHPSFPAKINTEFVQVI 201
            + F KY GLGNDFIL+DNR    P LTA E+   CDR +GIG DGVIFALPG++G DYTMRI NSDG+EPEMCGNGIRC+ARF+ADLEGK    +  Y+IHTLAG ++P    DGLVTVDMG P L   ++PTTL    D  V+  P+++  + W VTCVSMGNPH + FV D+  + L A+GPQFE HP+FP K NTEF+QV+
Sbjct:    3 IEFTKYHGLGNDFILIDNRGSTTPRLTAEEAVRWCDRHFGIGADGVIFALPGQDGTDYTMRIFNSDGSEPEMCGNGIRCLARFIADLEGKEPNASVTYRIHTLAGVMMPQLEPDGLVTVDMGEPRLLAAEIPTTLS-QPDEKVINQPLEVAGQSWSVTCVSMGNPHCITFVEDVAAIPLEAIGPQFECHPAFPKKTNTEFIQVV 205          
BLAST of mRNA_H-paniculata_contig7316.15287.1 vs. uniprot
Match: UPI0019EF3AFD (Diaminopimelate epimerase n=1 Tax=filamentous cyanobacterium LEGE 11480 TaxID=2777977 RepID=UPI0019EF3AFD)

HSP 1 Score: 261 bits (668), Expect = 6.040e-85
Identity = 124/202 (61.39%), Postives = 152/202 (75.25%), Query Frame = 0
Query:    1 VPFRKYQGLGNDFILVDNRDREEPLLTAGESAHLCDRRYGIGGDGVIFALPGKEGLDYTMRIINSDGTEPEMCGNGIRCMARFLADLEGKTAAE-YKIHTLAGTIIPVAREDGLVTVDMGPPELNGPKVPTTLPPNADGVVLRSPMKIDDKDWEVTCVSMGNPHAVVFVPDLDKLDLPAVGPQFETHPSFPAKINTEFVQVI 201
            + F KYQGLGNDFILVDNRD  EP +T  ++  LCDR +GIGGDGVIFALPG++G DY MRI NSDG+EPEMCGNGIRCMARF+ADLEG  A E YKIHTLAG I+P    DG VTVDMG P L   ++PTTL  +A    +  P+++  + W+VTCVSMGNPH + FV  +  +DL  +GPQFE+  +FP KINTEF++V+
Sbjct:    3 LEFTKYQGLGNDFILVDNRDSTEPKVTPEQAVKLCDRHFGIGGDGVIFALPGQDGTDYMMRIFNSDGSEPEMCGNGIRCMARFIADLEGDNAKESYKIHTLAGLIVPKLTADGQVTVDMGQPRLQASEIPTTLT-DAQQQSVNQPLEVAGQSWQVTCVSMGNPHCITFVDSVAAIDLEKIGPQFESDAAFPKKINTEFIEVV 203          
BLAST of mRNA_H-paniculata_contig7316.15287.1 vs. uniprot
Match: DAPF_ACAM1 (Diaminopimelate epimerase n=4 Tax=Acaryochloris TaxID=155977 RepID=DAPF_ACAM1)

HSP 1 Score: 261 bits (667), Expect = 9.760e-85
Identity = 127/204 (62.25%), Postives = 151/204 (74.02%), Query Frame = 0
Query:    1 VPFRKYQGLGNDFILVDNRDREEPLLTAGESAHLCDRRYGIGGDGVIFALPGKEGLDYTMRIINSDGTEPEMCGNGIRCMARFLADLEGK---TAAEYKIHTLAGTIIPVAREDGLVTVDMGPPELNGPKVPTTLPPNADGVVLRSPMKIDDKDWEVTCVSMGNPHAVVFVPDLDKLDLPAVGPQFETHPSFPAKINTEFVQVI 201
            V F KYQGLGNDFIL+DNR + +P LT  ++  +CDR +GIGGDGVIFALP +   DYTMRI NSDG+EPEMCGNGIRC+ARFLA LEGK   T   Y+IHTLAGTI P  + DGLV VDMGPP L   ++PTTL    D VV   P+++  + W VTCVSMGNPH + FV DL+ +D   +GPQFE HP FP +INTEF+QVI
Sbjct:    3 VEFTKYQGLGNDFILIDNRHQAQPCLTPDQAVQMCDRNFGIGGDGVIFALPPEGDTDYTMRIYNSDGSEPEMCGNGIRCLARFLAHLEGKPLQTDITYRIHTLAGTITPSLQADGLVKVDMGPPFLVPQEIPTTLGEGTDPVV-NQPLEVAGQSWPVTCVSMGNPHCITFVDDLEAIDFQTLGPQFEHHPVFPQRINTEFIQVI 205          
BLAST of mRNA_H-paniculata_contig7316.15287.1 vs. uniprot
Match: A0A1D8TLX1_9CYAN (Diaminopimelate epimerase n=28 Tax=Moorena TaxID=1155738 RepID=A0A1D8TLX1_9CYAN)

HSP 1 Score: 259 bits (663), Expect = 3.820e-84
Identity = 123/202 (60.89%), Postives = 150/202 (74.26%), Query Frame = 0
Query:    1 VPFRKYQGLGNDFILVDNRDREEPLLTAGESAHLCDRRYGIGGDGVIFALPGKEGLDYTMRIINSDGTEPEMCGNGIRCMARFLADLEGKT-AAEYKIHTLAGTIIPVAREDGLVTVDMGPPELNGPKVPTTLPPNADGVVLRSPMKIDDKDWEVTCVSMGNPHAVVFVPDLDKLDLPAVGPQFETHPSFPAKINTEFVQVI 201
            + F KY GLGNDFIL+DNRD  EP +T+ ++  LCDR +GIG DGVIFALPG+EG DYTMRI NSDG+EPEMCGNGIRC+ +FLADLEG      Y+IHTLAG IIP  + DG V VDMG P+L+  ++PT L   AD  V+ +P++I DK WEVTCVSMGNPH + FV D D + L  +GP FE H  FP + NTEF+QV+
Sbjct:    3 MEFTKYHGLGNDFILIDNRDDPEPRITSDQALQLCDRNFGIGADGVIFALPGQEGTDYTMRIFNSDGSEPEMCGNGIRCLGKFLADLEGDNHKTHYRIHTLAGVIIPELKGDGKVRVDMGMPQLSAAQIPTVLA-EADQKVINTPIEIADKLWEVTCVSMGNPHCITFVEDADAIPLETIGPLFEHHSVFPQRTNTEFIQVV 203          
BLAST of mRNA_H-paniculata_contig7316.15287.1 vs. uniprot
Match: A0A6T5Q8N6_HETAK (Diaminopimelate epimerase n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5Q8N6_HETAK)

HSP 1 Score: 261 bits (667), Expect = 4.470e-84
Identity = 126/212 (59.43%), Postives = 156/212 (73.58%), Query Frame = 0
Query:    1 VPFRKYQGLGNDFILVDNRDREEPLLTAGESAHLCDRRYGIGGDGVIFALPGKEGLDYTMRIINSDGTEPEMCGNGIRCMARFLADLEGKT--AAEYKIHTLAGTIIPVAREDGLVTVDMGPPELNGPKVPTTLPPNADGVVLRSPMKIDDKDWEVTCVSMGNPHAVVFVPDLDKLDLPAVGPQFETHPSFPAKINTEFVQVID-EHTKVGI 209
            + F KY+GLGNDFILVDNR+  EP +T  ++  LC+R +GIGGDGVIF LPG++G D+TMRI NSDG+EPEMCGNGIR   +++A LEGK      Y  HTLAG II     DGLV VDMG P      +PTTL  N DG VL  P+++D K +EV+CVSMGNPHA+VFV DLD+LDL  VGP FE HP+FPA++NTEFVQV+  +H K+ +
Sbjct:   52 ISFSKYEGLGNDFILVDNRESMEPKITPDQAIKLCNRNFGIGGDGVIFVLPGQKGTDFTMRIFNSDGSEPEMCGNGIRVFTKYIAKLEGKENEPVRYTFHTLAGEIIGDVTADGLVRVDMGFPIFKAADIPTTLAENEDGYVLNQPLEVDGKTYEVSCVSMGNPHAIVFVDDLDQLDLYKVGPIFEKHPAFPARVNTEFVQVLSRDHLKMKV 263          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7316.15287.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LFZ8_9PHAE4.300e-12682.86Diaminopimelate epimerase n=2 Tax=Ectocarpus TaxID... [more]
A0A7R9YC33_9STRA9.360e-9564.35Diaminopimelate epimerase n=2 Tax=Pinguiococcus py... [more]
A0A835YU85_9STRA1.520e-9365.38Diaminopimelate epimerase n=1 Tax=Tribonema minus ... [more]
A0A7S2S1Q0_9STRA2.770e-9266.83Diaminopimelate epimerase n=2 Tax=Rhizochromulina ... [more]
A0A7S2HNF9_9STRA4.550e-8864.65Diaminopimelate epimerase n=1 Tax=Dictyocha specul... [more]
UPI001F445AEF4.400e-8560.29diaminopimelate epimerase n=1 Tax=Leptodesmis sich... [more]
UPI0019EF3AFD6.040e-8561.39Diaminopimelate epimerase n=1 Tax=filamentous cyan... [more]
DAPF_ACAM19.760e-8562.25Diaminopimelate epimerase n=4 Tax=Acaryochloris Ta... [more]
A0A1D8TLX1_9CYAN3.820e-8460.89Diaminopimelate epimerase n=28 Tax=Moorena TaxID=1... [more]
A0A6T5Q8N6_HETAK4.470e-8459.43Diaminopimelate epimerase n=2 Tax=Heterosigma akas... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.310.10coord: 124..207
e-value: 5.5E-21
score: 76.8
NoneNo IPR availableGENE3D3.10.310.10coord: 1..123
e-value: 1.7E-47
score: 162.5
NoneNo IPR availablePANTHERPTHR31689:SF0DIAMINOPIMELATE EPIMERASE, CHLOROPLASTICcoord: 2..204
NoneNo IPR availableSUPERFAMILY54506Diaminopimelate epimerase-likecoord: 1..129
NoneNo IPR availableSUPERFAMILY54506Diaminopimelate epimerase-likecoord: 143..204
IPR001653Diaminopimelate epimerase, DapFTIGRFAMTIGR00652TIGR00652coord: 3..204
e-value: 4.1E-57
score: 191.6
IPR001653Diaminopimelate epimerase, DapFPFAMPF01678DAP_epimerasecoord: 156..204
e-value: 8.4E-9
score: 35.6
coord: 3..122
e-value: 5.2E-29
score: 100.9
IPR001653Diaminopimelate epimerase, DapFPANTHERPTHR31689FAMILY NOT NAMEDcoord: 2..204
IPR018510Diaminopimelate epimerase, active sitePROSITEPS01326DAP_EPIMERASEcoord: 64..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7316contigH-paniculata_contig7316:4751..11288 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7316.15287.1mRNA_H-paniculata_contig7316.15287.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7316 4751..11288 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7316.15287.1 ID=prot_H-paniculata_contig7316.15287.1|Name=mRNA_H-paniculata_contig7316.15287.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=210bp
VPFRKYQGLGNDFILVDNRDREEPLLTAGESAHLCDRRYGIGGDGVIFAL
PGKEGLDYTMRIINSDGTEPEMCGNGIRCMARFLADLEGKTAAEYKIHTL
AGTIIPVAREDGLVTVDMGPPELNGPKVPTTLPPNADGVVLRSPMKIDDK
DWEVTCVSMGNPHAVVFVPDLDKLDLPAVGPQFETHPSFPAKINTEFVQV
IDEHTKVGI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001653DAP_epimerase_DapF
IPR018510DAP_epimerase_AS