prot_H-paniculata_contig7299.15265.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7299.15265.1
Unique Nameprot_H-paniculata_contig7299.15265.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length61
Homology
BLAST of mRNA_H-paniculata_contig7299.15265.1 vs. uniprot
Match: D8LEK1_ECTSI (Ion_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEK1_ECTSI)

HSP 1 Score: 59.7 bits (143), Expect = 6.220e-9
Identity = 28/61 (45.90%), Postives = 39/61 (63.93%), Query Frame = 0
Query:    1 RNHRLVFWAVATDDATFKAVLLGLKVAGLILMTTAIIYGTETAAGLDDGSMAFNEDDMKWH 61
            RNH+L+      DD T KA LL +KV G+++MT+AI+YG E      +G+ AFNE   +WH
Sbjct:   98 RNHKLLASIFPNDDVTIKATLLIVKVIGVVMMTSAILYGVERGLTDGEGTGAFNEPGWQWH 158          
BLAST of mRNA_H-paniculata_contig7299.15265.1 vs. uniprot
Match: A0A6H5JQ48_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ48_9PHAE)

HSP 1 Score: 59.3 bits (142), Expect = 9.060e-9
Identity = 28/61 (45.90%), Postives = 39/61 (63.93%), Query Frame = 0
Query:    1 RNHRLVFWAVATDDATFKAVLLGLKVAGLILMTTAIIYGTETAAGLDDGSMAFNEDDMKWH 61
            RNH+L+      DD T KA LL +KV G+++MT+AI+YG E      +G+ AFNE   +WH
Sbjct:  160 RNHKLLASIFPNDDVTIKATLLIVKVIGVVMMTSAILYGVERGPTDAEGTGAFNEPGWQWH 220          
BLAST of mRNA_H-paniculata_contig7299.15265.1 vs. uniprot
Match: D7FXB0_ECTSI (Ion_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXB0_ECTSI)

HSP 1 Score: 56.6 bits (135), Expect = 7.490e-8
Identity = 32/68 (47.06%), Postives = 37/68 (54.41%), Query Frame = 0
Query:    1 RNHRLVFWAVATDDATFKAVLLGLKVAGLILMTTAIIYGTETA-------AGLDDGSMAFNEDDMKWH 61
            RNHR++       D T  A LLGLK+ GLILMTTAIIYGTE A          DD     +   M+WH
Sbjct:  104 RNHRMLEKIGTFTDVTVNACLLGLKILGLILMTTAIIYGTEQAFKDETDGKAFDDSGTIEDSGTMQWH 171          
BLAST of mRNA_H-paniculata_contig7299.15265.1 vs. uniprot
Match: A0A6H5K4I5_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4I5_9PHAE)

HSP 1 Score: 55.1 bits (131), Expect = 2.830e-7
Identity = 33/68 (48.53%), Postives = 37/68 (54.41%), Query Frame = 0
Query:    1 RNHRLVFWAVATDDATFKAVLLGLKVAGLILMTTAIIYGTETAAGLDDGSMAFNEDD-------MKWH 61
            RNHR +       D T  A LLGLK+ GLILMTTAIIYGTE A   D+   AF           M+WH
Sbjct:  145 RNHRTLEKIGTFTDVTVNACLLGLKILGLILMTTAIIYGTEQAFKGDEDGKAFXXXXXXXXXXXMQWH 212          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7299.15265.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LEK1_ECTSI6.220e-945.90Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JQ48_9PHAE9.060e-945.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXB0_ECTSI7.490e-847.06Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K4I5_9PHAE2.830e-748.53Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableTMHMMTMhelixcoord: 21..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7299contigH-paniculata_contig7299:5381..5770 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7299.15265.1mRNA_H-paniculata_contig7299.15265.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7299 5380..5770 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7299.15265.1 ID=prot_H-paniculata_contig7299.15265.1|Name=mRNA_H-paniculata_contig7299.15265.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=61bp
RNHRLVFWAVATDDATFKAVLLGLKVAGLILMTTAIIYGTETAAGLDDGS
MAFNEDDMKWH
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