prot_H-paniculata_contig7282.15257.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7282.15257.1
Unique Nameprot_H-paniculata_contig7282.15257.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length113
Homology
BLAST of mRNA_H-paniculata_contig7282.15257.1 vs. uniprot
Match: D8LJI2_ECTSI (Ribosomal protein L35, isoform CRA_b n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJI2_ECTSI)

HSP 1 Score: 161 bits (407), Expect = 4.200e-49
Identity = 86/112 (76.79%), Postives = 100/112 (89.29%), Query Frame = 0
Query:    1 MSKSDLTGQLTDLRTELQSLRVAKVTGGAASKLAKIKTVRKKIARVLTVYHQSQKLRYRELYADKKYVPLDLRPKKTRAIRRRLTPEQLSYKTERQRKREENLPRRCYALKA 112
            + K++LT +LT+LRTELQ+LRVA+VTGGAASKLAKI  VRKKIAR LTVYHQSQK R+RE Y D KYVPLDLRPKKTRAIRRRL P+QL+ KT+RQ+K+ +NLPRRCYALKA
Sbjct:   12 LGKAELTAKLTELRTELQTLRVAQVTGGAASKLAKIAVVRKKIARTLTVYHQSQKQRFREYYEDMKYVPLDLRPKKTRAIRRRLNPDQLAIKTDRQQKKLDNLPRRCYALKA 123          
BLAST of mRNA_H-paniculata_contig7282.15257.1 vs. uniprot
Match: A0A7N0UBG4_KALFE (Uncharacterized protein n=4 Tax=Mesangiospermae TaxID=1437183 RepID=A0A7N0UBG4_KALFE)

HSP 1 Score: 127 bits (318), Expect = 1.470e-35
Identity = 73/111 (65.77%), Postives = 87/111 (78.38%), Query Frame = 0
Query:    2 SKSDLTGQLTDLRTELQSLRVAKVTGGAASKLAKIKTVRKKIARVLTVYHQSQKLRYRELYADKKYVPLDLRPKKTRAIRRRLTPEQLSYKTERQRKREENLPRRCYALKA 112
            SK+DL  QL DL+TEL  LRVAKVTGGA +KL+KIK VR +IA+VLTV  Q QK   R++Y +KKY+PLDLRPKKTRAIRRRLT  Q S KTER++K+E   P R YA+KA
Sbjct:   13 SKADLLSQLKDLKTELSLLRVAKVTGGAPNKLSKIKVVRLQIAQVLTVISQKQKAALRDVYKNKKYLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPLRKYAIKA 123          
BLAST of mRNA_H-paniculata_contig7282.15257.1 vs. uniprot
Match: A0A078ITA2_BRANA (BnaAnng13110D protein n=6 Tax=Brassiceae TaxID=981071 RepID=A0A078ITA2_BRANA)

HSP 1 Score: 127 bits (318), Expect = 2.110e-35
Identity = 74/110 (67.27%), Postives = 85/110 (77.27%), Query Frame = 0
Query:    2 SKSDLTGQLTDLRTELQSLRVAKVTGGAASKLAKIKTVRKKIARVLTVYHQSQKLRYRELYADKKYVPLDLRPKKTRAIRRRLTPEQLSYKTERQRKREENLPRRCYALK 111
            SKSDL  QL DL+ EL  LRVAKVTGGA +KL+KIK VRK IA+VLTV  Q QK   RE Y +KK++PLDLRPKKTRAIRRRLT  QLS KTER++K+E   P R YA+K
Sbjct:   25 SKSDLQNQLQDLKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTVTSQKQKSALREAYKNKKFIPLDLRPKKTRAIRRRLTKHQLSLKTEREKKKEMYFPIRKYAIK 134          
BLAST of mRNA_H-paniculata_contig7282.15257.1 vs. uniprot
Match: A0A835ZB13_9STRA (Ribosomal L29 protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB13_9STRA)

HSP 1 Score: 126 bits (317), Expect = 2.160e-35
Identity = 78/112 (69.64%), Postives = 87/112 (77.68%), Query Frame = 0
Query:    2 SKSDLTGQLTDLRTELQSLRVAKVTGG-AASKLAKIKTVRKKIARVLTVYHQSQKLRYRELYADKKYVPLDLRPKKTRAIRRRLTPEQLSYKTERQRKREENLPRRCYALKA 112
            SKSDL GQL +L+ EL  LRVA+  GG AASKLAKIK VRK IARVLTVY+Q+QK   R  Y + KY+PLDLRPKKTRAIRRRLT  QL+ KT R +KRE N PRR YALKA
Sbjct:   13 SKSDLEGQLEELKKELAQLRVAQHLGGTAASKLAKIKVVRKNIARVLTVYNQTQKAALRVQYKNAKYMPLDLRPKKTRAIRRRLTTAQLTKKTVRVQKREANFPRRRYALKA 124          
BLAST of mRNA_H-paniculata_contig7282.15257.1 vs. uniprot
Match: A0A078JPP0_BRANA (BnaC01g44960D protein n=4 Tax=Brassica TaxID=3705 RepID=A0A078JPP0_BRANA)

HSP 1 Score: 127 bits (318), Expect = 2.370e-35
Identity = 74/110 (67.27%), Postives = 85/110 (77.27%), Query Frame = 0
Query:    2 SKSDLTGQLTDLRTELQSLRVAKVTGGAASKLAKIKTVRKKIARVLTVYHQSQKLRYRELYADKKYVPLDLRPKKTRAIRRRLTPEQLSYKTERQRKREENLPRRCYALK 111
            SKSDL  QL DL+ EL  LRVAKVTGGA +KL+KIK VRK IA+VLTV  Q QK   RE Y +KK++PLDLRPKKTRAIRRRLT  QLS KTER++K+E   P R YA+K
Sbjct:   29 SKSDLQNQLQDLKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTVTSQKQKSALREAYKNKKFIPLDLRPKKTRAIRRRLTKHQLSLKTEREKKKEMYFPIRKYAIK 138          
BLAST of mRNA_H-paniculata_contig7282.15257.1 vs. uniprot
Match: K3YWR4_SETIT (Uncharacterized protein n=58 Tax=Poaceae TaxID=4479 RepID=K3YWR4_SETIT)

HSP 1 Score: 126 bits (316), Expect = 2.970e-35
Identity = 73/111 (65.77%), Postives = 86/111 (77.48%), Query Frame = 0
Query:    2 SKSDLTGQLTDLRTELQSLRVAKVTGGAASKLAKIKTVRKKIARVLTVYHQSQKLRYRELYADKKYVPLDLRPKKTRAIRRRLTPEQLSYKTERQRKREENLPRRCYALKA 112
            +K++L GQL +L++EL  LRVAKVTGGA +KL+KIK VR  IARVLTV  Q QK   RE Y  KK +PLDLRPKKTRAIRRRLT  QLS KTER++KRE+  P R YA+KA
Sbjct:   13 NKAELQGQLKELKSELSLLRVAKVTGGAPNKLSKIKVVRTSIARVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQLSLKTEREKKREKYFPMRKYAIKA 123          
BLAST of mRNA_H-paniculata_contig7282.15257.1 vs. uniprot
Match: A0A061RP20_9CHLO (Large subunit ribosomal protein L35e n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RP20_9CHLO)

HSP 1 Score: 126 bits (316), Expect = 2.970e-35
Identity = 72/111 (64.86%), Postives = 88/111 (79.28%), Query Frame = 0
Query:    2 SKSDLTGQLTDLRTELQSLRVAKVTGGAASKLAKIKTVRKKIARVLTVYHQSQKLRYRELYADKKYVPLDLRPKKTRAIRRRLTPEQLSYKTERQRKREENLPRRCYALKA 112
            SKS+LT QL +L+ EL +LRVAKVTGGA +K++KIK VRK IARVLTV +Q+QK   RE Y  KKY+PLDLRPK+TRAIRRRLT  Q++ KTE+Q K+E   P R YA+KA
Sbjct:   13 SKSELTTQLKELKGELAALRVAKVTGGAPNKMSKIKVVRKSIARVLTVINQNQKSALREAYKGKKYIPLDLRPKRTRAIRRRLTKHQVNLKTEKQIKKERAFPMRKYAVKA 123          
BLAST of mRNA_H-paniculata_contig7282.15257.1 vs. uniprot
Match: A0A1D1YKV3_9ARAE (60S ribosomal protein L35 n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1YKV3_9ARAE)

HSP 1 Score: 126 bits (316), Expect = 2.970e-35
Identity = 74/111 (66.67%), Postives = 85/111 (76.58%), Query Frame = 0
Query:    2 SKSDLTGQLTDLRTELQSLRVAKVTGGAASKLAKIKTVRKKIARVLTVYHQSQKLRYRELYADKKYVPLDLRPKKTRAIRRRLTPEQLSYKTERQRKREENLPRRCYALKA 112
            S++DL  QL +L+TEL  LRVAKVTGGA +KL+KIK VR  IARVLTV  Q QK   RE Y+ KK++PLDLRPKKTRAIR+RLT  Q S KTERQRKRE   P R YA+KA
Sbjct:   13 SRADLLNQLKELKTELALLRVAKVTGGAPNKLSKIKVVRLSIARVLTVMSQKQKSALREAYSKKKFLPLDLRPKKTRAIRKRLTKHQASLKTERQRKREMYFPMRKYAIKA 123          
BLAST of mRNA_H-paniculata_contig7282.15257.1 vs. uniprot
Match: S7S0I6_GLOTA (Ribosomal protein L29 n=14 Tax=Agaricomycetes incertae sedis TaxID=355688 RepID=S7S0I6_GLOTA)

HSP 1 Score: 126 bits (316), Expect = 3.060e-35
Identity = 71/111 (63.96%), Postives = 87/111 (78.38%), Query Frame = 0
Query:    2 SKSDLTGQLTDLRTELQSLRVAKVTGGAASKLAKIKTVRKKIARVLTVYHQSQKLRYRELYADKKYVPLDLRPKKTRAIRRRLTPEQLSYKTERQRKREENLPRRCYALKA 112
            SK+DL+ QL DL+ EL SLRV KV GG+ASKL KI TVRK IARVLTV +  Q+   RE Y +KKY+PLDLRPK+TRAIRRRLT  + S KTE+QRK++ + P+R YA+KA
Sbjct:   14 SKNDLSKQLVDLKNELLSLRVQKVVGGSASKLTKINTVRKSIARVLTVMNHKQRQNLREFYKNKKYLPLDLRPKRTRAIRRRLTKHEKSLKTEKQRKKDIHFPKRKYAVKA 124          
BLAST of mRNA_H-paniculata_contig7282.15257.1 vs. uniprot
Match: UPI001E1DA6EB (60S ribosomal protein L35-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DA6EB)

HSP 1 Score: 126 bits (316), Expect = 3.150e-35
Identity = 71/110 (64.55%), Postives = 88/110 (80.00%), Query Frame = 0
Query:    3 KSDLTGQLTDLRTELQSLRVAKVTGGAASKLAKIKTVRKKIARVLTVYHQSQKLRYRELYADKKYVPLDLRPKKTRAIRRRLTPEQLSYKTERQRKREENLPRRCYALKA 112
            K DL  QL +L+TELQSLRVAKVTGGAASKLAKI  VRK IARVLTV HQ+QK   R+ Y +K+Y+P DLRPKKTRA+RR+LTP + S KT++Q+++E   P R +A+KA
Sbjct:   16 KEDLQKQLLELKTELQSLRVAKVTGGAASKLAKIHVVRKSIARVLTVIHQTQKDNLRKFYRNKRYMPKDLRPKKTRALRRQLTPRERSLKTKKQQRKERLYPMRKFAVKA 125          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7282.15257.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJI2_ECTSI4.200e-4976.79Ribosomal protein L35, isoform CRA_b n=2 Tax=Ectoc... [more]
A0A7N0UBG4_KALFE1.470e-3565.77Uncharacterized protein n=4 Tax=Mesangiospermae Ta... [more]
A0A078ITA2_BRANA2.110e-3567.27BnaAnng13110D protein n=6 Tax=Brassiceae TaxID=981... [more]
A0A835ZB13_9STRA2.160e-3569.64Ribosomal L29 protein-domain-containing protein n=... [more]
A0A078JPP0_BRANA2.370e-3567.27BnaC01g44960D protein n=4 Tax=Brassica TaxID=3705 ... [more]
K3YWR4_SETIT2.970e-3565.77Uncharacterized protein n=58 Tax=Poaceae TaxID=447... [more]
A0A061RP20_9CHLO2.970e-3564.86Large subunit ribosomal protein L35e n=1 Tax=Tetra... [more]
A0A1D1YKV3_9ARAE2.970e-3566.6760S ribosomal protein L35 n=1 Tax=Anthurium amnico... [more]
S7S0I6_GLOTA3.060e-3563.96Ribosomal protein L29 n=14 Tax=Agaricomycetes ince... [more]
UPI001E1DA6EB3.150e-3564.5560S ribosomal protein L35-like n=1 Tax=Mercenaria ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.20.90coord: 67..112
e-value: 2.5E-19
score: 71.1
NoneNo IPR availableGENE3D1.10.287.310coord: 1..66
e-value: 6.8E-26
score: 92.2
NoneNo IPR availablePANTHERPTHR45722FAMILY NOT NAMEDcoord: 2..111
NoneNo IPR availablePANTHERPTHR45722:SF360S RIBOSOMAL PROTEIN L35-2coord: 2..111
IPR001854Ribosomal protein L29/L35TIGRFAMTIGR00012TIGR00012coord: 1..52
e-value: 5.5E-16
score: 56.3
IPR001854Ribosomal protein L29/L35PFAMPF00831Ribosomal_L29coord: 1..52
e-value: 6.0E-16
score: 58.2
IPR001854Ribosomal protein L29/L35HAMAPMF_00374Ribosomal_L29coord: 1..53
score: 9.762
IPR036049Ribosomal protein L29/L35 superfamilySUPERFAMILY46561Ribosomal protein L29 (L29p)coord: 1..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7282contigH-paniculata_contig7282:7509..9912 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7282.15257.1mRNA_H-paniculata_contig7282.15257.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7282 7488..10775 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7282.15257.1 ID=prot_H-paniculata_contig7282.15257.1|Name=mRNA_H-paniculata_contig7282.15257.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=113bp
MSKSDLTGQLTDLRTELQSLRVAKVTGGAASKLAKIKTVRKKIARVLTVY
HQSQKLRYRELYADKKYVPLDLRPKKTRAIRRRLTPEQLSYKTERQRKRE
ENLPRRCYALKA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001854Ribosomal_L29/L35
IPR036049Ribosomal_L29/L35_sf