prot_H-paniculata_contig7282.15256.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig7282.15256.1 vs. uniprot
Match: D8LJI3_ECTSI (U6 snRNA-associated Sm-like protein LSm5 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJI3_ECTSI) HSP 1 Score: 167 bits (423), Expect = 1.560e-52 Identity = 81/85 (95.29%), Postives = 84/85 (98.82%), Query Frame = 0
Query: 1 MAARLLPLELIDKCIGSRLWIIMKGDKELVGTLRGFDDYVNMVLDDVTEYELDGDGTKRKVQLDQILLNGNNVAMLVPGGSPEDT 85
MAARLLPLELIDKCIGSRLWIIMKGDKELVGTLRGFDDYVNMVLDDVTEYE+D DGTKR++QLDQILLNGNNVAMLVPGGSPEDT
Sbjct: 1 MAARLLPLELIDKCIGSRLWIIMKGDKELVGTLRGFDDYVNMVLDDVTEYEVDADGTKRRIQLDQILLNGNNVAMLVPGGSPEDT 85
BLAST of mRNA_H-paniculata_contig7282.15256.1 vs. uniprot
Match: A0A835ZDD9_9STRA (U6 snRNA-associated Sm-like protein LSm5 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDD9_9STRA) HSP 1 Score: 148 bits (373), Expect = 6.440e-45 Identity = 69/83 (83.13%), Postives = 80/83 (96.39%), Query Frame = 0
Query: 1 MAARLLPLELIDKCIGSRLWIIMKGDKELVGTLRGFDDYVNMVLDDVTEYELDGDGTKRKVQLDQILLNGNNVAMLVPGGSPE 83
MA RL+PLELIDKCIGS+LWIIMKGDKELVGTLRGFDDYVNMVL+DVTEYE+D +G +R+V+L+QILLNGNNVA+LVPGGSP+
Sbjct: 1 MAGRLMPLELIDKCIGSKLWIIMKGDKELVGTLRGFDDYVNMVLEDVTEYEVDAEGVRREVKLEQILLNGNNVALLVPGGSPD 83
BLAST of mRNA_H-paniculata_contig7282.15256.1 vs. uniprot
Match: A0A067CXC5_SAPPC (U6 snRNA-associated Sm-like protein LSm5 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CXC5_SAPPC) HSP 1 Score: 139 bits (351), Expect = 1.700e-41 Identity = 68/80 (85.00%), Postives = 74/80 (92.50%), Query Frame = 0
Query: 4 RLLPLELIDKCIGSRLWIIMKGDKELVGTLRGFDDYVNMVLDDVTEYELDGDGTKRKVQLDQILLNGNNVAMLVPGGSPE 83
RLLPLELIDKCIGSR+WIIMKGDKE VGTLRGFDDYVNMVLDDVTEYE+ +G KRKV +DQ+LLNGNNV +LVPGGSPE
Sbjct: 5 RLLPLELIDKCIGSRMWIIMKGDKEFVGTLRGFDDYVNMVLDDVTEYEVTPEG-KRKVHVDQVLLNGNNVCLLVPGGSPE 83
BLAST of mRNA_H-paniculata_contig7282.15256.1 vs. uniprot
Match: A0A024UWN5_9STRA (U6 snRNA-associated Sm-like protein LSm5 n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024UWN5_9STRA) HSP 1 Score: 137 bits (346), Expect = 9.540e-41 Identity = 66/81 (81.48%), Postives = 75/81 (92.59%), Query Frame = 0
Query: 4 RLLPLELIDKCIGSRLWIIMKGDKELVGTLRGFDDYVNMVLDDVTEYELDGDGTKRKVQLDQILLNGNNVAMLVPGGSPED 84
RLLPLELIDKCIGSR+WIIMKGDKE VGTLRGFDDYVNMVLDDV EYE+ +G KRKV++DQ+LLNGNNV +LVPGG+PE+
Sbjct: 6 RLLPLELIDKCIGSRIWIIMKGDKEFVGTLRGFDDYVNMVLDDVIEYEITPEG-KRKVKVDQVLLNGNNVCLLVPGGNPEE 85
BLAST of mRNA_H-paniculata_contig7282.15256.1 vs. uniprot
Match: A0A024G4D3_9STRA (U6 snRNA-associated Sm-like protein LSm5 n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G4D3_9STRA) HSP 1 Score: 136 bits (343), Expect = 2.500e-40 Identity = 65/82 (79.27%), Postives = 74/82 (90.24%), Query Frame = 0
Query: 4 RLLPLELIDKCIGSRLWIIMKGDKELVGTLRGFDDYVNMVLDDVTEYELDGDGTKRKVQLDQILLNGNNVAMLVPGGSPEDT 85
R+LPLELIDKCIGSRLWI+M+GDKE VGTLRGFDDYVNMVLDDVTE+EL G KR+ +LDQ+LLNGNNV ML+PGG PED+
Sbjct: 5 RVLPLELIDKCIGSRLWIVMQGDKEFVGTLRGFDDYVNMVLDDVTEFELTPSG-KRQTELDQVLLNGNNVCMLIPGGMPEDS 85
BLAST of mRNA_H-paniculata_contig7282.15256.1 vs. uniprot
Match: K3W4W8_GLOUD (U6 snRNA-associated Sm-like protein LSm5 n=13 Tax=Oomycota TaxID=4762 RepID=K3W4W8_GLOUD) HSP 1 Score: 135 bits (339), Expect = 1.020e-39 Identity = 64/80 (80.00%), Postives = 74/80 (92.50%), Query Frame = 0
Query: 3 ARLLPLELIDKCIGSRLWIIMKGDKELVGTLRGFDDYVNMVLDDVTEYELDGDGTKRKVQLDQILLNGNNVAMLVPGGSP 82
+RLLPLELIDKCIGSRLWIIMKGDKE +GTLRGFDDYVNMVLDDVTEYE+ +G KR+++LDQ+LLNGNN+ +LVPGG P
Sbjct: 4 SRLLPLELIDKCIGSRLWIIMKGDKEFLGTLRGFDDYVNMVLDDVTEYEITPEG-KREIKLDQVLLNGNNICLLVPGGFP 82
BLAST of mRNA_H-paniculata_contig7282.15256.1 vs. uniprot
Match: A0A8K1CS49_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CS49_PYTOL) HSP 1 Score: 134 bits (336), Expect = 2.930e-39 Identity = 64/83 (77.11%), Postives = 75/83 (90.36%), Query Frame = 0
Query: 2 AARLLPLELIDKCIGSRLWIIMKGDKELVGTLRGFDDYVNMVLDDVTEYELDGDGTKRKVQLDQILLNGNNVAMLVPGGSPED 84
A RLLPLELIDKCIGS++WIIMKGDKE VGTLRGFDDYVNMVLDDVTE+E+ +G K++V+L+Q+LLNGNNV +LVPGG P D
Sbjct: 3 AGRLLPLELIDKCIGSQIWIIMKGDKEFVGTLRGFDDYVNMVLDDVTEFEITPEG-KKEVKLEQVLLNGNNVCLLVPGGFPSD 84
BLAST of mRNA_H-paniculata_contig7282.15256.1 vs. uniprot
Match: A0A7S2SPY3_9STRA (U6 snRNA-associated Sm-like protein LSm5 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SPY3_9STRA) HSP 1 Score: 134 bits (336), Expect = 6.560e-39 Identity = 64/83 (77.11%), Postives = 74/83 (89.16%), Query Frame = 0
Query: 1 MAARLLPLELIDKCIGSRLWIIMKGDKELVGTLRGFDDYVNMVLDDVTEYELDGDGTKRKVQLDQILLNGNNVAMLVPGGSPE 83
M+ + LPL +IDKCIGSRLW+IMKGDKELVGTLRGFDDYVNMVLDDVTEYE+ +G KR +L+QILLNGNN+A+LVPGG PE
Sbjct: 24 MSGKKLPLAIIDKCIGSRLWVIMKGDKELVGTLRGFDDYVNMVLDDVTEYEITPEG-KRATRLEQILLNGNNIALLVPGGDPE 105
BLAST of mRNA_H-paniculata_contig7282.15256.1 vs. uniprot
Match: W2LTZ1_PHYPR (U6 snRNA-associated Sm-like protein LSm5 n=9 Tax=Phytophthora TaxID=4783 RepID=W2LTZ1_PHYPR) HSP 1 Score: 133 bits (334), Expect = 1.140e-38 Identity = 63/79 (79.75%), Postives = 73/79 (92.41%), Query Frame = 0
Query: 4 RLLPLELIDKCIGSRLWIIMKGDKELVGTLRGFDDYVNMVLDDVTEYELDGDGTKRKVQLDQILLNGNNVAMLVPGGSP 82
R+LPLELIDKCIGS+LWI+MKGDKE +GTLRGFDDYVNMVLDDVTEYE+ +G KR+V+LDQ+LLNGNNV +LVPGG P
Sbjct: 27 RILPLELIDKCIGSKLWIVMKGDKEFLGTLRGFDDYVNMVLDDVTEYEITPEG-KREVKLDQVLLNGNNVCLLVPGGFP 104
BLAST of mRNA_H-paniculata_contig7282.15256.1 vs. uniprot
Match: A0A7S4M2I3_9EUKA (U6 snRNA-associated Sm-like protein LSm5 n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4M2I3_9EUKA) HSP 1 Score: 132 bits (333), Expect = 1.390e-38 Identity = 62/80 (77.50%), Postives = 74/80 (92.50%), Query Frame = 0
Query: 3 ARLLPLELIDKCIGSRLWIIMKGDKELVGTLRGFDDYVNMVLDDVTEYELDGDGTKRKVQLDQILLNGNNVAMLVPGGSP 82
+++LPLELIDKCIGS++W+IM+GDKE+VGTLRGFDDYVNMVL+DVTEYE+ DG KR +LDQILLNGNNVA+LVPGG P
Sbjct: 21 SQVLPLELIDKCIGSKMWVIMRGDKEIVGTLRGFDDYVNMVLEDVTEYEITADG-KRTTKLDQILLNGNNVALLVPGGDP 99 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7282.15256.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig7282.15256.1 ID=prot_H-paniculata_contig7282.15256.1|Name=mRNA_H-paniculata_contig7282.15256.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=86bpback to top |